CSPI06G02680 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G02680
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 2139167 .. 2139367 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCTTCAAGTTCAAGTCTTCGAAAGAACAACAATGATAACGCCAAAGCTCCTCGTCTACGGCTCAGTATGAATGCTGGTGATGGCACTCAGATTAACCGTCGTCATTCTCGACCACTTCAAAGAAACCGCAACAGTAAAACCAACCGTGCTCCTCCGCCAAAGAAGAGCACCGGCGGCGGTGGTCAGACAAACTAA

mRNA sequence

ATGGAGTCTTCAAGTTCAAGTCTTCGAAAGAACAACAATGATAACGCCAAAGCTCCTCGTCTACGGCTCAGTATGAATGCTGGTGATGGCACTCAGATTAACCGTCGTCATTCTCGACCACTTCAAAGAAACCGCAACAGTAAAACCAACCGTGCTCCTCCGCCAAAGAAGAGCACCGGCGGCGGTGGTCAGACAAACTAA

Coding sequence (CDS)

ATGGAGTCTTCAAGTTCAAGTCTTCGAAAGAACAACAATGATAACGCCAAAGCTCCTCGTCTACGGCTCAGTATGAATGCTGGTGATGGCACTCAGATTAACCGTCGTCATTCTCGACCACTTCAAAGAAACCGCAACAGTAAAACCAACCGTGCTCCTCCGCCAAAGAAGAGCACCGGCGGCGGTGGTCAGACAAACTAA
Homology
[Close]
BLAST of CSPI06G02680 vs. TrEMBL
Match: A0A0A0KAN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020130 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.1e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MESSSSSLRKNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTG 60
          MESSSSSLRKNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTG
Sbjct: 1  MESSSSSLRKNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTG 60

Query: 61 GGGQTN 67
          GGGQTN
Sbjct: 61 GGGQTN 66

[Close]
BLAST of CSPI06G02680 vs. TrEMBL
Match: A0A0A0L7D2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258100 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.3e-12
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 1 

Query: 1  MESSSSSLRKNNNDNAKAPRLR-LSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKST 60
          MESSSS L+KNN DNAKAPRLR L++NA       RRHSRP +R RNSK N APPPKKST
Sbjct: 1  MESSSSCLQKNNKDNAKAPRLRRLTVNA-------RRHSRPPRRARNSKINPAPPPKKST 60

Query: 61 GGGGQTN 67
          GGGGQTN
Sbjct: 61 GGGGQTN 60

[Close]
BLAST of CSPI06G02680 vs. NCBI nr
Match: gi|700190695|gb|KGN45899.1| (hypothetical protein Csa_6G020130 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 4.4e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MESSSSSLRKNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTG 60
          MESSSSSLRKNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTG
Sbjct: 1  MESSSSSLRKNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTG 60

Query: 61 GGGQTN 67
          GGGQTN
Sbjct: 61 GGGQTN 66

[Close]
BLAST of CSPI06G02680 vs. NCBI nr
Match: gi|700202575|gb|KGN57708.1| (hypothetical protein Csa_3G258100 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 4.7e-12
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 1 

Query: 1  MESSSSSLRKNNNDNAKAPRLR-LSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKST 60
          MESSSS L+KNN DNAKAPRLR L++NA       RRHSRP +R RNSK N APPPKKST
Sbjct: 1  MESSSSCLQKNNKDNAKAPRLRRLTVNA-------RRHSRPPRRARNSKINPAPPPKKST 60

Query: 61 GGGGQTN 67
          GGGGQTN
Sbjct: 61 GGGGQTN 60

The following BLAST results are available for this feature:
BLAST of CSPI06G02680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G02680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAN3_CUCSA3.1e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020130 PE=4 SV=1[more]
A0A0A0L7D2_CUCSA3.3e-1273.13Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258100 PE=4 SV=1[more]
BLAST of CSPI06G02680 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G02680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190695|gb|KGN45899.1|4.4e-26100.00hypothetical protein Csa_6G020130 [Cucumis sativus][more]
gi|700202575|gb|KGN57708.1|4.7e-1273.13hypothetical protein Csa_3G258100 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G02680.1CSPI06G02680.1mRNA