CSPI06G02490 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G02490
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ras-related protein Rab-18
Location	Chr6 : 1899171 .. 1902416 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATTTAGACAGCGTTTTGGTGAGGGAGGCAGCCGTTTTGTTGTGAGGTAATCTGGCGCTTTATTCTCCTTTCAATCCAAATCAAAATGTCCATTGAAGGAAACCACGTCGCCATAGCCATCTATAAAATATGCTTCTCTTTCCTTTCCCATTTCCCCCTTTTTCAACTCCATTTTCACTGACCTACACAACTCTCCATGGGATCCCCCTCCCCTCACCTCAATCTCTCCTTCAAGGTTCTCCTTATCGGCGATTCCGCCGTCGGCAAAAGCAGCCTTCTCCACACCTTCATTTCCGCCTCTCTCCACGATCTCTCTCCCACCATTGGTACTTCTTCCTTCAACCCCCTATTATCTTCCCTTTTCTCTTTCCCCAAACTATACCTCTTTTTTTTTTGGAATTCACATTACTAGTTTATTCAGGGAATTTGTGTTTTCTGTCTTCTTTAGGTGTGGATTTCAAGATCAAGCAACTTACCGTTGCTGGGAAGAGGTTGAAGTTGACTATTTGGGACACTGGTAATGAATTTAATTCAATTTTTAATGGATCTTTTAGTTTTTCGATCCTTTTAAATTTTTGAATGTAGCCTATAGCATGTTTTCTGTCCAATGTACTTAGTAAGATTGTTTTTGGCTCTATAGTTGACGAATTTTGCGATCGGACATCTGGGGTTAAATATATATATATATATACACTTTTTTTGGGATCTCGGCATATTGATACATAGGTAGTTGAATCAAATTTCGTTGTGATATTTTTGCAAGGACCAAATGGTATATTTTAATAGATTGTGGGCATGGAATTCTCAACCGTCTTTAATTTTACTCAAAAGGAAAAATGGCTGACTTTCTAAAGATTTAACATGGTGCAGCTGGGCAAGAGAGGTTCAGATCATTAACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTCTTGGTAAGCTATCGAATAACACTCTTGTGCTCCAACATATATGCATTCTGTGATTTAGTGTCAGCTTTCTGTGTTCATCCAATGTGTCAAACATATCAAATGATGTTATTACAATGAAGCTTAACTTAGCTTCTTTTGAAAGTGCTAATAGTGTATCGATTGAGTTTCGTAATTCCACTGAATTAGGAGAAGGATGTGCAGAAGATAGTTTGTTATGTTTCGTCTTGTGCTATAAAACCTCGTTTGCAATCATCCGAACAGGAAATTCTGCATTGATTCCTTTTGTTGAATAACTTGAATTCTCTCTGCACTAGTTCTTTCAGTCATTTGATGAGAATCCATGGAGAAGACACTGAAGTTGCACAGTTACGCTTTCGTCAAGTTTCTTGATTAGAAATTGAAATATCTGATTGGTTGGTTTTTTTGGACAGAACTTTGTTGTTTATGTTTCATTCGTATCTTTTTCTTTCTTTTCCACTTCCTCTTCTTATTGCAGTGCACATCAAATTCTCATTTAATTCTAGAGTGGCAGTTATTTGTCAAATATGTTAGTTCTCACCAAATTCTTTAGATCCTAAAGCACAAGTTCGTGAAGAATTCCGGAGTGGCACTTTTTCATACAACATTATCTTTGGTTTACTGACATTGTTGTATTCTTGTTGATCTTAGTTTATGATGTGACTCGGAGAGAAACCTTTGCAAACTTATTGGATGTATGGGCAAATGAAGTTGAGCTTTATTTGACAGACCAGGACTGTGTCAAGATGCTCGTTGGAAACAAAGTTGATAGAGTAAGTCCAGTCAATCCAGTTTATAAATGTATAAATTAGAATTCCTACGTTTATAATGGATGAAAAATGATGGATCAGACACTAACATTTTTGGGGAAAATTGCATGTTGATCTCATACGATTTTGGATCATTTAATATTTGTTGACATTTTGTTTTGTTTTGTTATTTCCCCTCCCTGCAATAATCTGGAAAGTACAATTAATCTATACTGTAGATTTACGGTAAATGTAAAAGAAAAATGTCAGTGCACTTTTTTCTTTTTTACGTGTTGCAATAATCTCAGGAATCTGAAAGGGTTGTAAGCAGAGAAGATGGGATTGCACTAGCCAACAAGCTTGGATCTTTGTTTTTTGAGTGCAGTGCTAAAACCAGAGAAAATGTAGAGAAATGCTTTGAAGAACTTGCCATTAAGGTACTTTTTAACACAACAGTTATCATCTACTTGCATTAAAAAGAAAACTAATGACATTTTACTTGTGAATGTGATATGTTGGTGGTGGACAGAGAAAATAATTGTAAAAGTTTGAGTCTAGAAATGGTCGTTTTGTTGTTTCTTTTTTATACAAATGGATAACTGTTTGATGAAACTTGTAGCCAAAGATAATAGCGATTAGTTCTGGGGGGAGCCATAGAGAGGGACGAGATTCTGCCTTTTCAATCCTTTATGTATGATTTTCTAATTGTGAATATTTAGGAGGGCATATGAGTGAAAAAACATAAATTGACGTTATTGTGTTTAAGAAAACTACCTTTTTAGTTCTTAAGTTTTCAAAAATAGATGCTCTGGTTCCTTGTAATTTTTTAGTTTTTAAGAATAGACTTTAAAGGTCCAAGTGTGCGATTTACTTTTATTATTCTTAAGGTTGAGATGATACTTTAAATTAAAAAGAATGATTAAAAAATTCTCTCCTCTTCCTACCCTCCTTCCATCTTCATGTTTAATTACTATATATTGTTGGAACTCAAGTACTAAAAAGGTAATTTTCCTTAATGTTTTTATACAATATCTTCCTTCCTTCTTTGCTCCTTCGGCCATTAACCATCCTGGATCAGTTTTCTAGATATGGATTTCAAATATTTTGCCCTGTAGTAAATTTCGCAAGCGAACATGTTTAGAATTGTGTTCATAGAAAGGCAGCTCCCAAGAATCTGAGAGTTGTGAAACTATTGCTTAGAAACTTCCCATATTTAATTTTTGTACAGATTATGGAGGTTCCTAGTTTCTTGGAGGAAAGATCCAGTTTAGTAAAGAGGAACATTTTAAGGCAAAAACAGGAAGGTCAAGCTCAACAAAGTGGTGGTTGTTGCTCTTAGAAAGCAACTTATATTAAAACTAAACTACATCATTGTATATGTGTATTTCTTCTCTTACACTGTTGCTTTTCCCCCATTCAGTTGTAAGTTATTATTTGTACTATCTGAAAGGGAAAAAAACTCACTCATAATTACATTACATTGATTTACTGTGTAAAGCTATATGTTTTTCTTCTCTGCCAAATAAAGCAAAAGTATACTTTCC

mRNA sequence

ATGGGATCCCCCTCCCCTCACCTCAATCTCTCCTTCAAGGTTCTCCTTATCGGCGATTCCGCCGTCGGCAAAAGCAGCCTTCTCCACACCTTCATTTCCGCCTCTCTCCACGATCTCTCTCCCACCATTGGTGTGGATTTCAAGATCAAGCAACTTACCGTTGCTGGGAAGAGGTTGAAGTTGACTATTTGGGACACTGCTGGGCAAGAGAGGTTCAGATCATTAACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTCTTGTTTATGATGTGACTCGGAGAGAAACCTTTGCAAACTTATTGGATGTATGGGCAAATGAAGTTGAGCTTTATTTGACAGACCAGGACTGTGTCAAGATGCTCGTTGGAAACAAAGTTGATAGAGAATCTGAAAGGGTTGTAAGCAGAGAAGATGGGATTGCACTAGCCAACAAGCTTGGATCTTTGTTTTTTGAGTGCAGTGCTAAAACCAGAGAAAATGTAGAGAAATGCTTTGAAGAACTTGCCATTAAGATTATGGAGGTTCCTAGTTTCTTGGAGGAAAGATCCAGTTTAGTAAAGAGGAACATTTTAAGGCAAAAACAGGAAGGTCAAGCTCAACAAAGTGGTGGTTGTTGCTCTTAG

Coding sequence (CDS)

ATGGGATCCCCCTCCCCTCACCTCAATCTCTCCTTCAAGGTTCTCCTTATCGGCGATTCCGCCGTCGGCAAAAGCAGCCTTCTCCACACCTTCATTTCCGCCTCTCTCCACGATCTCTCTCCCACCATTGGTGTGGATTTCAAGATCAAGCAACTTACCGTTGCTGGGAAGAGGTTGAAGTTGACTATTTGGGACACTGCTGGGCAAGAGAGGTTCAGATCATTAACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTCTTGTTTATGATGTGACTCGGAGAGAAACCTTTGCAAACTTATTGGATGTATGGGCAAATGAAGTTGAGCTTTATTTGACAGACCAGGACTGTGTCAAGATGCTCGTTGGAAACAAAGTTGATAGAGAATCTGAAAGGGTTGTAAGCAGAGAAGATGGGATTGCACTAGCCAACAAGCTTGGATCTTTGTTTTTTGAGTGCAGTGCTAAAACCAGAGAAAATGTAGAGAAATGCTTTGAAGAACTTGCCATTAAGATTATGGAGGTTCCTAGTTTCTTGGAGGAAAGATCCAGTTTAGTAAAGAGGAACATTTTAAGGCAAAAACAGGAAGGTCAAGCTCAACAAAGTGGTGGTTGTTGCTCTTAG

Homology

[Close]

BLAST of CSPI06G02490 vs. Swiss-Prot
Match: RAC2A_ARATH (Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 9.0e-86
Identity = 161/210 (76.67%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 1   MGSPSPH--LNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKR 60
           MGS S     +LSFK+LLIGDS VGKSSLL +FIS+S+ DL+PTIGVDFKIKQLTV GKR
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDC 120
           LKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETF NL+DVW  E+ELY T+Q+C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 121 VKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPS 180
           V+MLVGNKVDRESER VSRE+GIALA +L  +F ECSA+TR+NVE+CFEELA+KIMEVPS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 181 FLEERSSLVKRNILRQKQEGQAQQSGGCCS 209
            LEE SS VKRNIL+QK E Q     GCCS
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]

BLAST of CSPI06G02490 vs. Swiss-Prot
Match: RAC2B_ARATH (Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.3e-76
Identity = 151/210 (71.90%), Postives = 173/210 (82.38%), Query Frame = 1


Query: 1   MGSPSPH--LNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKR 60
           MGS S     +LSFK+LLIGDS VGKSSLL +FIS+S+ DL+PTIGVDFKIKQ+ V GKR
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDC 120
           LKLTIWDTAGQE+FR+LTSSY+RG+QGIILVYDVT+RETF NL D+WA E+ELY T+ DC
Sbjct: 61  LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120

Query: 121 VKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPS 180
           +KMLVGNKVDRESER VSRE+G+ALA  L  LF ECSA+TRENV  CFEELA+KIMEVPS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180

Query: 181 FLEERSSLVKRNILRQKQEGQAQQSGGCCS 209
            LEE SS VKR     K + +A Q G CCS
Sbjct: 181 LLEEGSSSVKR-----KPDYRAHQ-GRCCS 204

[Close]

BLAST of CSPI06G02490 vs. Swiss-Prot
Match: RABC1_ARATH (Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 7.4e-72
Identity = 138/211 (65.40%), Postives = 164/211 (77.73%), Query Frame = 1


Query: 1   MGSPS--PHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKR 60
           MGS S  P  +  FKVLLIGDS VGKSSLL +F S +  DLSPTIGVDFK+K LT+  K+
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDC 120
           LKL IWDTAGQERFR+LTSSYYRGAQGII+VYDVTRR+TF NL D+WA E++LY T+QDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 VKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPS 180
           +KMLVGNKVD+ESER VS+++GI  A + G LF ECSAKTR NVE+CFEEL +KI+E PS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 FLEERSSLVKRNILRQK-QEGQAQQSGGCCS 209
              E SS  K+NI +Q   +  +  S  CCS
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of CSPI06G02490 vs. Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.6e-48
Identity = 106/200 (53.00%), Postives = 135/200 (67.50%), Query Frame = 1


Query: 11  SFKVLLIGDSAVGKSSLLHTFISASLH-DLSPTIGVDFKIKQLTVAGKRLKLTIWDTAGQ 70
           + K+L+IG+S VGKSSLL  F   +   +L+ TIGVDFK+K + + G R KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67

Query: 71  ERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKMLVGNKVDR 130
           ERFR+LT SYYRGAQG+ILVYDVT+R+TF   L+ W NE+E Y T  D VKMLVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTKRDTFTK-LENWLNELETYCTRNDLVKMLVGNKIDK 127

Query: 131 ESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLEERSSLVKR 190
           ++ R V R +G+  A K   LF E SAKTR+ V+  FEEL  KI++ P   E  SS+   
Sbjct: 128 DN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWE--SSIQNH 187

Query: 191 NILRQKQEGQAQQS-GGCCS 209
            +     E Q Q + GG CS
Sbjct: 188 GVQLSDNEPQRQGACGGYCS 203

[Close]

BLAST of CSPI06G02490 vs. Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.3e-48
Identity = 110/200 (55.00%), Postives = 136/200 (68.00%), Query Frame = 1


Query: 11  SFKVLLIGDSAVGKSSLLHTFISASLH-DLSPTIGVDFKIKQLTVAGKRLKLTIWDTAGQ 70
           + K+L+IG+S VGKSSLL  F   +   +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67

Query: 71  ERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKMLVGNKVDR 130
           ERFR+LT SYYRGAQG+ILVYDVTRR+TF   LD W NE+E Y T  D VKMLVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTRRDTFVK-LDNWLNELETYCTRNDIVKMLVGNKIDK 127

Query: 131 ESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLEERSSLVKR 190
           E+ R V R +G+  A K   LF E SAKT + V+  FEEL  KI++ P  L E  S  K 
Sbjct: 128 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPG-LWESESQNKG 187

Query: 191 NILRQKQEGQAQQS-GGCCS 209
             L  K+EG    + GG CS
Sbjct: 188 VKLSNKEEGHGGGACGGYCS 204

[Close]

BLAST of CSPI06G02490 vs. TrEMBL
Match: A0A0A0KAL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016920 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.5e-111
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 1


Query: 1   MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLK 60
           MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLK
Sbjct: 1   MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLK 60

Query: 61  LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK 120
           LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK
Sbjct: 61  LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK 120

Query: 121 MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL 180
           MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL
Sbjct: 121 MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL 180

Query: 181 EERSSLVKRNILRQKQEGQAQQSGGCCS 209
           EERSSLVKRNILRQKQEGQAQQSGGCCS
Sbjct: 181 EERSSLVKRNILRQKQEGQAQQSGGCCS 208

[Close]

BLAST of CSPI06G02490 vs. TrEMBL
Match: V4SM34_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012751mg PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 9.7e-87
Identity = 169/211 (80.09%), Postives = 186/211 (88.15%), Query Frame = 1


Query: 1   MGSPSPHLN---LSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGK 60
           MGS S   N   LSFK+LLIGDS VGKSSLL +FIS+S+ DLSPTIGVDFKIK LTVAGK
Sbjct: 1   MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQD 120
           RLKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETF NL DVWA EV+LY T+QD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120

Query: 121 CVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVP 180
           CVKMLVGNKVDR+SERVVSRE+GIALA + GSLF ECSAKTRENVE+CFE+LA+KIMEVP
Sbjct: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180

Query: 181 SFLEERSSLVKRNILRQKQEGQAQQSGGCCS 209
           S LEE S++VKRNIL+QK E Q+   GGCCS
Sbjct: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211

[Close]

BLAST of CSPI06G02490 vs. TrEMBL
Match: A0A067DLS1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028300mg PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 9.7e-87
Identity = 169/211 (80.09%), Postives = 186/211 (88.15%), Query Frame = 1


Query: 1   MGSPSPHLN---LSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGK 60
           MGS S   N   LSFK+LLIGDS VGKSSLL +FIS+S+ DLSPTIGVDFKIK LTVAGK
Sbjct: 1   MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQD 120
           RLKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETF NL DVWA EV+LY T+QD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120

Query: 121 CVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVP 180
           CVKMLVGNKVDR+SERVVSRE+GIALA + GSLF ECSAKTRENVE+CFE+LA+KIMEVP
Sbjct: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180

Query: 181 SFLEERSSLVKRNILRQKQEGQAQQSGGCCS 209
           S LEE S++VKRNIL+QK E Q+   GGCCS
Sbjct: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211

[Close]

BLAST of CSPI06G02490 vs. TrEMBL
Match: D7TIU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g04740 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.3e-86
Identity = 166/204 (81.37%), Postives = 182/204 (89.22%), Query Frame = 1


Query: 5   SPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLKLTIW 64
           S   +LSFK+LLIGDSAVGKSSLL +FIS+S+ DL+PTIGVDFKIKQLTV GKRLKLTIW
Sbjct: 8   SSSYDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIW 67

Query: 65  DTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKMLVG 124
           DTAGQERFR+LTSSYYRGAQGIILVYDVTRRE+F NL DVWA EVELY T+QDCVKMLVG
Sbjct: 68  DTAGQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVG 127

Query: 125 NKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLEERS 184
           NKVDRESERVVSRE+GIALA + G LFFECSAKTRENVEKCFEELA+KIMEVPS LEE S
Sbjct: 128 NKVDRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGS 187

Query: 185 SLVKRNILRQKQEGQAQQSGGCCS 209
           ++ KRNIL+ K E Q   +GGCCS
Sbjct: 188 TVGKRNILKPKPENQPPPTGGCCS 211

[Close]

BLAST of CSPI06G02490 vs. TrEMBL
Match: A0A0D2SGR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G412800 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.8e-85
Identity = 162/207 (78.26%), Postives = 180/207 (86.96%), Query Frame = 1


Query: 2   GSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLKL 61
           G  S   +LSFK+LLIGDS VGKSSLL +FIS S  DL+PTIGVDFKIK LTV GKRLKL
Sbjct: 6   GQSSGSYDLSFKILLIGDSGVGKSSLLVSFISTSAEDLAPTIGVDFKIKLLTVGGKRLKL 65

Query: 62  TIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKM 121
           TIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETF NL DVWA EVELY T+QDCVKM
Sbjct: 66  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNQDCVKM 125

Query: 122 LVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLE 181
           LVGNKVDR+SER V+RE+G+ALA +LGS+F ECSAKTRENVE+CFEELA+KIME+PS LE
Sbjct: 126 LVGNKVDRDSERAVTREEGVALAKELGSMFLECSAKTRENVEQCFEELALKIMEIPSLLE 185

Query: 182 ERSSLVKRNILRQKQEGQAQQSGGCCS 209
           E SS+ KRN+L+QK E QA   GGCCS
Sbjct: 186 EGSSVGKRNMLKQKPEYQASPGGGCCS 212

[Close]

BLAST of CSPI06G02490 vs. TAIR10
Match: AT5G03530.1 (AT5G03530.1 RAB GTPase homolog C2A)

HSP 1 Score: 317.8 bits (813), Expect = 5.1e-87
Identity = 161/210 (76.67%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 1   MGSPSPH--LNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKR 60
           MGS S     +LSFK+LLIGDS VGKSSLL +FIS+S+ DL+PTIGVDFKIKQLTV GKR
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDC 120
           LKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETF NL+DVW  E+ELY T+Q+C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 121 VKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPS 180
           V+MLVGNKVDRESER VSRE+GIALA +L  +F ECSA+TR+NVE+CFEELA+KIMEVPS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 181 FLEERSSLVKRNILRQKQEGQAQQSGGCCS 209
            LEE SS VKRNIL+QK E Q     GCCS
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]

BLAST of CSPI06G02490 vs. TAIR10
Match: AT3G09910.1 (AT3G09910.1 RAB GTPase homolog C2B)

HSP 1 Score: 287.3 bits (734), Expect = 7.4e-78
Identity = 151/210 (71.90%), Postives = 173/210 (82.38%), Query Frame = 1


Query: 1   MGSPSPH--LNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKR 60
           MGS S     +LSFK+LLIGDS VGKSSLL +FIS+S+ DL+PTIGVDFKIKQ+ V GKR
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDC 120
           LKLTIWDTAGQE+FR+LTSSY+RG+QGIILVYDVT+RETF NL D+WA E+ELY T+ DC
Sbjct: 61  LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120

Query: 121 VKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPS 180
           +KMLVGNKVDRESER VSRE+G+ALA  L  LF ECSA+TRENV  CFEELA+KIMEVPS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180

Query: 181 FLEERSSLVKRNILRQKQEGQAQQSGGCCS 209
            LEE SS VKR     K + +A Q G CCS
Sbjct: 181 LLEEGSSSVKR-----KPDYRAHQ-GRCCS 204

[Close]

BLAST of CSPI06G02490 vs. TAIR10
Match: AT1G43890.1 (AT1G43890.1 RAB GTPASE HOMOLOG B18)

HSP 1 Score: 271.6 bits (693), Expect = 4.2e-73
Identity = 138/211 (65.40%), Postives = 164/211 (77.73%), Query Frame = 1


Query: 1   MGSPS--PHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKR 60
           MGS S  P  +  FKVLLIGDS VGKSSLL +F S +  DLSPTIGVDFK+K LT+  K+
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDC 120
           LKL IWDTAGQERFR+LTSSYYRGAQGII+VYDVTRR+TF NL D+WA E++LY T+QDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 VKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPS 180
           +KMLVGNKVD+ESER VS+++GI  A + G LF ECSAKTR NVE+CFEEL +KI+E PS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 FLEERSSLVKRNILRQK-QEGQAQQSGGCCS 209
              E SS  K+NI +Q   +  +  S  CCS
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of CSPI06G02490 vs. TAIR10
Match: AT3G11730.1 (AT3G11730.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 164.1 bits (414), Expect = 9.4e-41
Identity = 94/197 (47.72%), Postives = 123/197 (62.44%), Query Frame = 1


Query: 12  FKVLLIGDSAVGKSSLLHTFIS-ASLHDLSPTIGVDFKIKQLTVAGKRLKLTIWDTAGQE 71
           FK+LLIGDS+VGKS LL  F   A +     TIGVDFKI+ +   GK +KL IWDTAGQE
Sbjct: 9   FKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQE 68

Query: 72  RFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKMLVGNKVDRE 131
           RFR++TSSYYRGA GII+VYD T  E+F N+   W +E++ Y  +  C K+L+GNK D  
Sbjct: 69  RFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYANESVC-KLLIGNKNDMV 128

Query: 132 SERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLEERSSLVKRN 191
             +VVS E G ALA++LG  F E SAK   NVE+ F  +A +I +        +      
Sbjct: 129 ESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPG 188

Query: 192 ILRQKQEGQAQQSGGCC 208
            ++ K +   Q +GGCC
Sbjct: 189 TVQMKGQPIQQNNGGCC 203

[Close]

BLAST of CSPI06G02490 vs. TAIR10
Match: AT5G59840.1 (AT5G59840.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-39
Identity = 95/200 (47.50%), Postives = 125/200 (62.50%), Query Frame = 1


Query: 13  KVLLIGDSAVGKSSLLHTFISASLH-DLSPTIGVDFKIKQLTVAGKRLKLTIWDTAGQER 72
           K+LLIGDS VGKS LL  F   S       TIG+DFKI+ + + GKR+KL IWDTAGQER
Sbjct: 17  KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76

Query: 73  FRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKMLVGNKVDR-E 132
           FR++T++YYRGA GI+LVYDVT   +F N+ + W   +E + +D +  K+LVGNK D  E
Sbjct: 77  FRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNKADMDE 136

Query: 133 SERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLEERSSLVKRN 192
           S+R V +  G ALA++ G  FFE SAKT  NVE+ F  +A  I +  +  + R+      
Sbjct: 137 SKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAEPATIK 196

Query: 193 ILRQKQ---EGQAQQSGGCC 208
           I +  Q    GQA Q   CC
Sbjct: 197 ISQTDQAAGAGQATQKSACC 214

[Close]

BLAST of CSPI06G02490 vs. NCBI nr
Match: gi|449441211|ref|XP_004138376.1| (PREDICTED: ras-related protein RABC2a-like [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 2.1e-111
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 1


Query: 1   MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLK 60
           MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLK
Sbjct: 1   MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLK 60

Query: 61  LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK 120
           LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK
Sbjct: 61  LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK 120

Query: 121 MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL 180
           MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL
Sbjct: 121 MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL 180

Query: 181 EERSSLVKRNILRQKQEGQAQQSGGCCS 209
           EERSSLVKRNILRQKQEGQAQQSGGCCS
Sbjct: 181 EERSSLVKRNILRQKQEGQAQQSGGCCS 208

[Close]

BLAST of CSPI06G02490 vs. NCBI nr
Match: gi|659126228|ref|XP_008463077.1| (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-110
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 1


Query: 1   MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLK 60
           MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTV GKRLK
Sbjct: 1   MGSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVGGKRLK 60

Query: 61  LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK 120
           LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK
Sbjct: 61  LTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVK 120

Query: 121 MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL 180
           MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL
Sbjct: 121 MLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFL 180

Query: 181 EERSSLVKRNILRQKQEGQAQQSGGCCS 209
           EERSSLVKR+ILRQKQEGQAQQSGGCCS
Sbjct: 181 EERSSLVKRSILRQKQEGQAQQSGGCCS 208

[Close]

BLAST of CSPI06G02490 vs. NCBI nr
Match: gi|502176741|ref|XP_004515929.1| (PREDICTED: ras-related protein RABC2a-like [Cicer arietinum])

HSP 1 Score: 329.3 bits (843), Expect = 4.8e-87
Identity = 165/207 (79.71%), Postives = 184/207 (88.89%), Query Frame = 1


Query: 2   GSPSPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLKL 61
           G  S   +LSFK+LLIGDSAVGKSSL+ +FISAS+ DLSPTIGVDFKIK LTV GKRLKL
Sbjct: 41  GQSSSSYDLSFKILLIGDSAVGKSSLILSFISASVEDLSPTIGVDFKIKLLTVGGKRLKL 100

Query: 62  TIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKM 121
           TIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRR+TF NL +VW+ EVELY T+Q+CVKM
Sbjct: 101 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVWSKEVELYSTNQNCVKM 160

Query: 122 LVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLE 181
           LVGNKVDR+SERVVS E+G+ALA + G LFFECSAKTRENV+KCFEELA+KIMEVPS LE
Sbjct: 161 LVGNKVDRDSERVVSTEEGLALAKEFGCLFFECSAKTRENVDKCFEELALKIMEVPSLLE 220

Query: 182 ERSSLVKRNILRQKQEGQAQQSGGCCS 209
           E S+ VKRNIL+QKQE QA Q GGCCS
Sbjct: 221 EGSTSVKRNILKQKQEPQASQDGGCCS 247

[Close]

BLAST of CSPI06G02490 vs. NCBI nr
Match: gi|567871755|ref|XP_006428467.1| (hypothetical protein CICLE_v10012751mg [Citrus clementina])

HSP 1 Score: 327.8 bits (839), Expect = 1.4e-86
Identity = 169/211 (80.09%), Postives = 186/211 (88.15%), Query Frame = 1


Query: 1   MGSPSPHLN---LSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGK 60
           MGS S   N   LSFK+LLIGDS VGKSSLL +FIS+S+ DLSPTIGVDFKIK LTVAGK
Sbjct: 1   MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQD 120
           RLKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETF NL DVWA EV+LY T+QD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120

Query: 121 CVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVP 180
           CVKMLVGNKVDR+SERVVSRE+GIALA + GSLF ECSAKTRENVE+CFE+LA+KIMEVP
Sbjct: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180

Query: 181 SFLEERSSLVKRNILRQKQEGQAQQSGGCCS 209
           S LEE S++VKRNIL+QK E Q+   GGCCS
Sbjct: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211

[Close]

BLAST of CSPI06G02490 vs. NCBI nr
Match: gi|225441147|ref|XP_002267276.1| (PREDICTED: ras-related protein RABC2a [Vitis vinifera])

HSP 1 Score: 327.4 bits (838), Expect = 1.8e-86
Identity = 166/204 (81.37%), Postives = 182/204 (89.22%), Query Frame = 1


Query: 5   SPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLKLTIW 64
           S   +LSFK+LLIGDSAVGKSSLL +FIS+S+ DL+PTIGVDFKIKQLTV GKRLKLTIW
Sbjct: 8   SSSYDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIW 67

Query: 65  DTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKMLVG 124
           DTAGQERFR+LTSSYYRGAQGIILVYDVTRRE+F NL DVWA EVELY T+QDCVKMLVG
Sbjct: 68  DTAGQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVG 127

Query: 125 NKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLEERS 184
           NKVDRESERVVSRE+GIALA + G LFFECSAKTRENVEKCFEELA+KIMEVPS LEE S
Sbjct: 128 NKVDRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGS 187

Query: 185 SLVKRNILRQKQEGQAQQSGGCCS 209
           ++ KRNIL+ K E Q   +GGCCS
Sbjct: 188 TVGKRNILKPKPENQPPPTGGCCS 211

The following BLAST results are available for this feature:

BLAST of CSPI06G02490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAC2A_ARATH	9.0e-86	76.67	Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1	[more]
RAC2B_ARATH	1.3e-76	71.90	Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1	[more]
RABC1_ARATH	7.4e-72	65.40	Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1	[more]
RB18B_DANRE	2.6e-48	53.00	Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1	[more]
RAB18_CHICK	3.3e-48	55.00	Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1	[more]

BLAST of CSPI06G02490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAL0_CUCSA	1.5e-111	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016920 PE=4 SV=1	[more]
V4SM34_9ROSI	9.7e-87	80.09	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012751mg PE=4 SV=1	[more]
A0A067DLS1_CITSI	9.7e-87	80.09	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028300mg PE=4 SV=1	[more]
D7TIU1_VITVI	1.3e-86	81.37	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g04740 PE=4 SV=...	[more]
A0A0D2SGR0_GOSRA	1.8e-85	78.26	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G412800 PE=4 SV=1	[more]

BLAST of CSPI06G02490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03530.1	5.1e-87	76.67	RAB GTPase homolog C2A	[more]
AT3G09910.1	7.4e-78	71.90	RAB GTPase homolog C2B	[more]
AT1G43890.1	4.2e-73	65.40	RAB GTPASE HOMOLOG B18	[more]
AT3G11730.1	9.4e-41	47.72	Ras-related small GTP-binding family protein	[more]
AT5G59840.1	2.3e-39	47.50	Ras-related small GTP-binding family protein	[more]

BLAST of CSPI06G02490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441211\|ref\|XP_004138376.1\|	2.1e-111	100.00	PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]	[more]
gi\|659126228\|ref\|XP_008463077.1\|	2.4e-110	99.04	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
gi\|502176741\|ref\|XP_004515929.1\|	4.8e-87	79.71	PREDICTED: ras-related protein RABC2a-like [Cicer arietinum]	[more]
gi\|567871755\|ref\|XP_006428467.1\|	1.4e-86	80.09	hypothetical protein CICLE_v10012751mg [Citrus clementina]	[more]
gi\|225441147\|ref\|XP_002267276.1\|	1.8e-86	81.37	PREDICTED: ras-related protein RABC2a [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0046907	intracellular transport
biological_process	GO:0015031	protein transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0030742	GTP-dependent protein binding
molecular_function	GO:0080115	myosin XI tail binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G02490.1	CSPI06G02490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 13..174 score: 3.6
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..168 score: 4.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 10..207 score: 6.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..190 score: 4.39
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 34..50 score: 6.2E-35coord: 12..33 score: 6.2E-35coord: 116..129 score: 6.2E-35coord: 52..74 score: 6.2E-35coord: 151..173 score: 6.2
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 3..208 score: 6.9E
None	No IPR available	PANTHER	PTHR24073:SF536	RAS-RELATED PROTEIN RABC2A	coord: 3..208 score: 6.9E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 9..176 score: 6.4
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 14..177 score: 9.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 12..176 score: 8.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 17..208 score: 2.
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..177 score: 0
None	No IPR available	PROFILE	PS51419	RAB	coord: 7..208 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G02490	Cla001020	Watermelon (97103) v1	cpiwmB490
CSPI06G02490	Csa6G016920	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G02490	MELO3C025015	Melon (DHL92) v3.5.1	cpimeB468
CSPI06G02490	ClCG08G003310	Watermelon (Charleston Gray)	cpiwcgB540
CSPI06G02490	ClCG08G002380	Watermelon (Charleston Gray)	cpiwcgB526
CSPI06G02490	Lsi08G002190	Bottle gourd (USVL1VR-Ls)	cpilsiB479
CSPI06G02490	MELO3C025015.2	Melon (DHL92) v3.6.1	cpimedB464
CSPI06G02490	CsaV3_6G002680	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G02490	Cla97C08G146980	Watermelon (97103) v2	cpiwmbB530
CSPI06G02490	Cla97C08G146400	Watermelon (97103) v2	cpiwmbB516
CSPI06G02490	Bhi04G001774	Wax gourd	cpiwgoB594
CSPI06G02490	Cucsa.365960	Cucumber (Gy14) v1	cgycpiB540
CSPI06G02490	CmaCh09G012770	Cucurbita maxima (Rimu)	cmacpiB033
CSPI06G02490	CmoCh09G012320	Cucurbita moschata (Rifu)	cmocpiB023
CSPI06G02490	Cp4.1LG06g09580	Cucurbita pepo (Zucchini)	cpecpiB793
CSPI06G02490	CsGy6G002540	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G02490	Carg24100	Silver-seed gourd	carcpiB0711

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G02490	Cucurbita maxima (Rimu)	cmacpiB488
CSPI06G02490	Cucurbita moschata (Rifu)	cmocpiB477
CSPI06G02490	Cucurbita pepo (Zucchini)	cpecpiB585