CSPI05G21270 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G21270
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionU5 small nuclear ribonucleoprotein 40 kDa protein
LocationChr5 : 22069005 .. 22071576 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAACCAAACCCTAGTCTTCATCGTTCATTTCAGGCTTGACTCCCACTGGAATCGTCTTCTTCGTTCGTCCCTCTCCCTCCCATCTTACCTTATCCGACGACCGACCGGCACTCCGGCGTACCACTAACGCTACTGCAGGCGTCCTTTGTTTCCGCCAACTTCGACTCTTTGTTCACTTCCTGTCCGACGCTCAATTGGTTTGGATCCATCTTCGTTGTATCTCTATGCTTCTTAGTTGGTAAAGTTCTCTTTTTTTATTTTTTTTGTTTGCTGTTCTTTATATATTGAAACATGAATAGAAATGTGCAATGTGTTTGGTATTTGTTTCTGTATCTTTGTTCTCTAAAATTTTGGAATTAAAAAATATAATACAAGAACTTGAATTTCATAATTTTGAGTGGAGAAGTTTATTAAAAATGAGAAAAATAAACGAGAACAGTTGCTAATGCTTCCCTCCGTTTCTGAAATCTGGAAACTAGAAATAAAGAAACTAATATTGGACTGCCACACTCTCAGCTTTTCCTTGGATGTGGAAATCGAGTTTGGCACAATCAGTGATTTGGCTAATTCGATTGTGCAGCTCATCCTCCTTGTTTTTTTGCGTATTATGTTACTTTGCTTTTGTAATTAGACTAGTTGGTCGGATTATTTTTAGAACATTTCCAATTGCTTTAGTTTTCGGTTTGTTTTTAATTGTTGGAAGGCAGTTAGGTTGGGATTTGGGAATAGGCAAGGGTGTAGCTGCTGATGTTCACTGAGATTTGTGGGTGAACGTTTTTGAAGTGGTGACTGTAATGAGAGGTTTAGTGTGAAATACTCATTACTGTGTATATCAAGTTATCAACATTTGTTTTGAAAGGTTATCTTGTTTCAGACTAAAGAAAGTTGTTGGGTGGTGTAGTTTTTATACAATAGTTGCACAGAAATATAGAAGATAGGATTCTCAAGTCATTTCTTATATTTTAATCATCATTCACGAGTCAAGTCCTGTCGTGTGTGTTCTATCTGAATCTTGTTCTATTTTCTTACACATCTCAATTAATTTTTTTTTCCATTTTAGAGGTTTTGTCAAATATTTAGCATAAGTCAATATGCAAGTCCCTTCAGAAGGAGAAAATGCTTTGGCTACGGTTGGTCCTCGGCCAATGGAATGGTCAACCGTTCCATATAATCCTCCTCAAGGACCTGGGCCGAATGTGAAACAGCGAACATCTAGTCTGGAATCACCAATCATGTTGTTGTCAGGCCATCAGAGTGCCATATATACATTAAAGTTCAATCCAGATGGAAACGTGGTTGCCTCTGGGTCTCACGACAAGGAAATTTTTCTCTGGAATGTACATGGGGATTGCAAGAATTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTAGACCTTCATTGGACTGTTGATGGATCTCAGATAGTTAGTGCCAGTCCCGATAAAACATTGAGAGCATGGGATGTTGAAACTGGAAAACAAATTAAGAAGATGGCAGAACACTCCTCATTTGTCAATTCATGTTGTCCCACAAGAAGAGGGCCGCCACTAATTGTCAGTGGATCAGATGATGGAACCGCAAAACTTTGGGATATGCGTCAAAGGGGCGCTATTCAAACATTCCCGGATAAATATCAGATTACAGCAGTAAGTTTCTCAGATGCATCAGACAAGATCTTCACAGGTGGAATCGATAACGATGTTAAGGTTTGGGATTTGCGCAAAGGTGAAGTTATGATGACACTTCAAGGTCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCTTATCTCCTCACTAATGGAATGGATTGCAAGCTCTGCATATGGGACATGCGCCCATATGCACCTCAAAACCGATGTGTAAAGATATTTGAAGGGCACCAACATAACTTTGAAAAAAACCTACTGAAATGTAGCTGGTCTGCTGATGGTAGCAAGGTCACTGCAGGTAGTTCAGATCGGATGGTTTACATATGGGATACAACGTCTCGACGAATATTGTACAAGCTTCCTGGCCATACTGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTGTTGCATCTTGCGGTAGTGATAAACAGATATATCTTGGGGAGATTTAATCTACATTCGAAATCGTCAATCTGTACTGTAAGTGCTCTTGTCAATTACTTAATTGCTTCTATTTTCCTAATGTAAGTGACCCACAAAAATGATTTTTGGACGTAGGATTCAAGGTGACATTTCTGGGTAATGTAGTAAACGTCTTCATGACATAAAAACTTGCAATTTGAACTTTGTTTCCATGTGATTTTGTGGGATTAATTTGTAGGCTTTTTTGCAGCCACTGTTTTCTATGGGTAATCTGAGGGACTACAATAGTTTAGTTGAGTACTATTCGAGGTTCAAATTATTTTAGTTCGAGTTTAGAAAGTATTTGTCCAGGAAGAGCTTGCAATACTAAAACAAGTTATATCATATGAATTAAATCGAAAGGGATAAATTGTTGTAAAAAATTCTTTGGAGATTTCTTCATCTTATTCTCTAGTTAAACTTCAC

mRNA sequence

ATGCAAGTCCCTTCAGAAGGAGAAAATGCTTTGGCTACGGTTGGTCCTCGGCCAATGGAATGGTCAACCGTTCCATATAATCCTCCTCAAGGACCTGGGCCGAATGTGAAACAGCGAACATCTAGTCTGGAATCACCAATCATGTTGTTGTCAGGCCATCAGAGTGCCATATATACATTAAAGTTCAATCCAGATGGAAACGTGGTTGCCTCTGGGTCTCACGACAAGGAAATTTTTCTCTGGAATGTACATGGGGATTGCAAGAATTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTAGACCTTCATTGGACTGTTGATGGATCTCAGATAGTTAGTGCCAGTCCCGATAAAACATTGAGAGCATGGGATGTTGAAACTGGAAAACAAATTAAGAAGATGGCAGAACACTCCTCATTTGTCAATTCATGTTGTCCCACAAGAAGAGGGCCGCCACTAATTGTCAGTGGATCAGATGATGGAACCGCAAAACTTTGGGATATGCGTCAAAGGGGCGCTATTCAAACATTCCCGGATAAATATCAGATTACAGCAGTAAGTTTCTCAGATGCATCAGACAAGATCTTCACAGGTGGAATCGATAACGATGTTAAGGTTTGGGATTTGCGCAAAGGTGAAGTTATGATGACACTTCAAGGTCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCTTATCTCCTCACTAATGGAATGGATTGCAAGCTCTGCATATGGGACATGCGCCCATATGCACCTCAAAACCGATGTGTAAAGATATTTGAAGGGCACCAACATAACTTTGAAAAAAACCTACTGAAATGTAGCTGGTCTGCTGATGGTAGCAAGGTCACTGCAGGTAGTTCAGATCGGATGGTTTACATATGGGATACAACGTCTCGACGAATATTGTACAAGCTTCCTGGCCATACTGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTGTTGCATCTTGCGGTAGTGATAAACAGATATATCTTGGGGAGATTTAA

Coding sequence (CDS)

ATGCAAGTCCCTTCAGAAGGAGAAAATGCTTTGGCTACGGTTGGTCCTCGGCCAATGGAATGGTCAACCGTTCCATATAATCCTCCTCAAGGACCTGGGCCGAATGTGAAACAGCGAACATCTAGTCTGGAATCACCAATCATGTTGTTGTCAGGCCATCAGAGTGCCATATATACATTAAAGTTCAATCCAGATGGAAACGTGGTTGCCTCTGGGTCTCACGACAAGGAAATTTTTCTCTGGAATGTACATGGGGATTGCAAGAATTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTAGACCTTCATTGGACTGTTGATGGATCTCAGATAGTTAGTGCCAGTCCCGATAAAACATTGAGAGCATGGGATGTTGAAACTGGAAAACAAATTAAGAAGATGGCAGAACACTCCTCATTTGTCAATTCATGTTGTCCCACAAGAAGAGGGCCGCCACTAATTGTCAGTGGATCAGATGATGGAACCGCAAAACTTTGGGATATGCGTCAAAGGGGCGCTATTCAAACATTCCCGGATAAATATCAGATTACAGCAGTAAGTTTCTCAGATGCATCAGACAAGATCTTCACAGGTGGAATCGATAACGATGTTAAGGTTTGGGATTTGCGCAAAGGTGAAGTTATGATGACACTTCAAGGTCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCTTATCTCCTCACTAATGGAATGGATTGCAAGCTCTGCATATGGGACATGCGCCCATATGCACCTCAAAACCGATGTGTAAAGATATTTGAAGGGCACCAACATAACTTTGAAAAAAACCTACTGAAATGTAGCTGGTCTGCTGATGGTAGCAAGGTCACTGCAGGTAGTTCAGATCGGATGGTTTACATATGGGATACAACGTCTCGACGAATATTGTACAAGCTTCCTGGCCATACTGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTGTTGCATCTTGCGGTAGTGATAAACAGATATATCTTGGGGAGATTTAA
Homology
[Close]
BLAST of CSPI05G21270 vs. Swiss-Prot
Match: SNR40_HUMAN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens GN=SNRNP40 PE=1 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 5.2e-123
Identity = 186/306 (60.78%), Postives = 246/306 (80.39%), Query Frame = 1 

Query: 39  RTSSLESPIMLLSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKN 98
           R SSL++PIMLLSGH+  +Y  KF+P+G+ +AS   D+ I LWNV+GDC N+  L+GH  
Sbjct: 51  RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 110

Query: 99  AVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSG 158
           AV++LH+  DGS + SAS DKT+  WD ETG+++K++  H+SFVNSC P RRGP L+ +G
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 170

Query: 159 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMT 218
           SDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++  T
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 230

Query: 219 LQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLK 278
           ++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+
Sbjct: 231 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290

Query: 279 CSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQ 338
           CSWS DGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE  FHP EPI+ S  SDK+
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKR 350

Query: 339 IYLGEI 345
           +Y+GEI
Sbjct: 351 LYMGEI 356

[Close]
BLAST of CSPI05G21270 vs. Swiss-Prot
Match: SNR40_MOUSE (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=1 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 8.9e-123
Identity = 184/306 (60.13%), Postives = 246/306 (80.39%), Query Frame = 1 

Query: 39  RTSSLESPIMLLSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKN 98
           R SSL++PIMLLSGH+  +Y  KF+P+G+ +AS   D+ I LWNV+GDC N+  L+GH  
Sbjct: 52  RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111

Query: 99  AVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSG 158
           AV++LH+  DGS + SAS DKT+  WD ETG+++K++  H+SFVNSC P RRGP L+ +G
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171

Query: 159 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMT 218
           SDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++  T
Sbjct: 172 SDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 231

Query: 219 LQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLK 278
           ++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291

Query: 279 CSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQ 338
           CSWS DGSK+ AGS+DR VY+WDTTSRR+LYKLPGH GS+NE  FHP EPI+ S  SDK+
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKR 351

Query: 339 IYLGEI 345
           +Y+GEI
Sbjct: 352 LYMGEI 357

[Close]
BLAST of CSPI05G21270 vs. Swiss-Prot
Match: SNR40_BOVIN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.2e-122
Identity = 185/306 (60.46%), Postives = 246/306 (80.39%), Query Frame = 1 

Query: 39  RTSSLESPIMLLSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKN 98
           R SSL++PIMLLSGH+  +Y  KF+P+G+ +AS   D+ I LWNV+GDC N+  L+GH  
Sbjct: 52  RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111

Query: 99  AVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSG 158
           AV++LH+  DGS + SAS DKT+  WD ETG+++K++  H+SFVNSC P RRGP L+ +G
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171

Query: 159 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMT 218
           SDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++  T
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 231

Query: 219 LQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLK 278
           ++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCV+IF+G+ HNFEKNLL+
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLR 291

Query: 279 CSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQ 338
           CSWS DGSK+ AGS+DR VY+WDTTSRRILYKLPGH GS+NE  FHP EPI+ S  SDK+
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKR 351

Query: 339 IYLGEI 345
           +Y+GEI
Sbjct: 352 LYMGEI 357

[Close]
BLAST of CSPI05G21270 vs. Swiss-Prot
Match: SNR40_PONAB (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 4.9e-121
Identity = 184/306 (60.13%), Postives = 245/306 (80.07%), Query Frame = 1 

Query: 39  RTSSLESPIMLLSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKN 98
           R SSL++PIMLLSGH+  +Y  KF+P+G+ +AS   D+ I LWNV+GDC N+  L+G+  
Sbjct: 51  RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCGNYATLKGYSG 110

Query: 99  AVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSG 158
           AV++LH+  DGS + SAS DKT+  WD ETG+++K++  H+SFVNSC P RRGP L+ +G
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 170

Query: 159 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMT 218
           SDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++  T
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 230

Query: 219 LQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLK 278
           ++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+
Sbjct: 231 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290

Query: 279 CSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQ 338
           CSWS DGSK+ AGS+DR V +WDTTSRRILYKLPGH GS+NE  FHP EPI+ S  SDK+
Sbjct: 291 CSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKR 350

Query: 339 IYLGEI 345
           +Y+GEI
Sbjct: 351 LYMGEI 356

[Close]
BLAST of CSPI05G21270 vs. Swiss-Prot
Match: SNR40_DICDI (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum GN=snrnp40 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 6.0e-111
Identity = 177/308 (57.47%), Postives = 228/308 (74.03%), Query Frame = 1 

Query: 38  QRTSSLESPIMLLSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHK 97
           +RTS LE PIM L GH+  IY+ KFN  G  +ASG  DKEIFLWNV+G+C N+ VL+GHK
Sbjct: 46  ERTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHK 105

Query: 98  NAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVS 157
             +L+LHW+ D ++I +A  DK++  WD   G+ IK++ EHS  VNSCCP RRGPPL+ S
Sbjct: 106 GTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVAS 165

Query: 158 GSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VM 217
           GSDD +A+++D R +G+   F  KY +T+V FSDASD++ TGGIDN ++VWD+R  E  +
Sbjct: 166 GSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPL 225

Query: 218 MTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNL 277
            TL  HQD IT   +S DG+YLL+N MD    IWD+RPYAP NR +K F G Q+NFEKNL
Sbjct: 226 YTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNL 285

Query: 278 LKCSWSADGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSD 337
           +K SWS DG ++  GSSDR VYIWDT ++++ Y LPGH+G+VNE  FHP+EPI+ASC SD
Sbjct: 286 IKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSD 345

Query: 338 KQIYLGEI 345
           K IYLGEI
Sbjct: 346 KTIYLGEI 353

[Close]
BLAST of CSPI05G21270 vs. TrEMBL
Match: A0A0A0KTB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G588760 PE=4 SV=1)

HSP 1 Score: 735.7 bits (1898), Expect = 2.5e-209
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1 

Query: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL 60
           MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 61  KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120
           KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT
Sbjct: 61  KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 344

[Close]
BLAST of CSPI05G21270 vs. TrEMBL
Match: V7CX72_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G114300g PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 2.8e-192
Identity = 312/345 (90.43%), Postives = 327/345 (94.78%), Query Frame = 1 

Query: 1   MQV-PSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYT 60
           MQV PSEGE+AL+ VGPRPMEWSTVPYN PQ PGPN KQRTSSLESPIMLLSGHQS IYT
Sbjct: 1   MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSVIYT 60

Query: 61  LKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDK 120
           +KFNP G+VVASGSHD+EIFLWNVHGDCKNFMVL+GHKNAVLDLHWT DG+QIVSASPDK
Sbjct: 61  MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180
           T+RAWDVETGKQIKKM EH S+VNSCCP+RRGPPL+VSGSDDGTAKLWDMRQRG+IQTFP
Sbjct: 121 TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLL 240
           DKYQITAV FSDASDKIFTGGIDNDVK+WDLRKGEV MTLQGHQDMIT MQLSPDGSYLL
Sbjct: 181 DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSMQLSPDGSYLL 240

Query: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYI 300
           TNGMDCKLCIWDMRPYAPQNRCVK+FEGHQHNFEKNLLKC WS DGSKVTAGSSDRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKVFEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 301 WDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           WDTTSRRILYKLPGH GSVNECVFHP+EPIV SC SDKQIYLGEI
Sbjct: 301 WDTTSRRILYKLPGHNGSVNECVFHPNEPIVGSCSSDKQIYLGEI 345

[Close]
BLAST of CSPI05G21270 vs. TrEMBL
Match: I1N8B6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G114900 PE=4 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 6.3e-192
Identity = 311/345 (90.14%), Postives = 327/345 (94.78%), Query Frame = 1 

Query: 1   MQV-PSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYT 60
           MQV PSEGE+AL+ VGPRPMEWSTVPYN PQ PGPN KQRTSSLESPIMLLSGHQSAIYT
Sbjct: 1   MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 61  LKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDK 120
           +KFNP G+VVASGSHD+EIFLWNVHGDCKNFMVL+GHKNAVLDLHWT DG+QIVSASPDK
Sbjct: 61  MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180
           T+RAWDVETGKQIKKM EH S+VNSCCP+RRGPPL+VSGSDDGTAKLWDMRQRG+IQTFP
Sbjct: 121 TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLL 240
           DKYQITAV FSDASDKIFTGGIDNDVK+WDLRKGEV MTLQGHQDMIT MQLSPDGSYLL
Sbjct: 181 DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLL 240

Query: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYI 300
           TNGMDCKLCIWDMRPYAPQNRCVK+ EGHQHNFEKNLLKC WS DGSKVTAGSSDRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 301 WDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           WDTTSRRILYKLPGH GSVNECVFHP+EPI+ SC SDKQIYLGEI
Sbjct: 301 WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345

[Close]
BLAST of CSPI05G21270 vs. TrEMBL
Match: A0A0L9U747_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g195800 PE=4 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 8.2e-192
Identity = 310/345 (89.86%), Postives = 328/345 (95.07%), Query Frame = 1 

Query: 1   MQV-PSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYT 60
           MQV PSEGE+AL+ VGPRPMEWSTVPYN PQ PGPN KQRTSSLESPIMLLSGHQSAIYT
Sbjct: 1   MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 61  LKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDK 120
           +KFNP G+VVASGSHD+EIFLWNVHGDCKNFMVL+GHKNAVLDLHWT DG+QI+SASPDK
Sbjct: 61  MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIISASPDK 120

Query: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180
           T+RAWDVETGKQIKKM EH S+VN+CCP+RRGPPL+VSGSDDGTAKLWDMRQRG+IQTFP
Sbjct: 121 TVRAWDVETGKQIKKMVEHLSYVNACCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLL 240
           DKYQITAV FSDASDKIFTGGIDNDVK+WDLRKGEV MTLQGHQDMITGMQLSPDGSYLL
Sbjct: 181 DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLL 240

Query: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYI 300
           TNGMDCKLCIWDMRPYAPQNRCVK+ EGHQHNFEKNLLKC WS DGSKVTAGSSDRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 301 WDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           WDTTSRRILYKLPGH GSVNECVFHP+E I+ SCGSDKQIYLGEI
Sbjct: 301 WDTTSRRILYKLPGHNGSVNECVFHPNERIIGSCGSDKQIYLGEI 345

[Close]
BLAST of CSPI05G21270 vs. TrEMBL
Match: A0A0B2RQU6_GLYSO (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Glycine soja GN=glysoja_011221 PE=4 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 8.2e-192
Identity = 310/345 (89.86%), Postives = 327/345 (94.78%), Query Frame = 1 

Query: 1   MQV-PSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYT 60
           MQV PSEGE+AL+ VGPRPMEWSTVPYN PQ PGPN KQRTSSLESPIMLLSGHQSAIYT
Sbjct: 1   MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 61  LKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDK 120
           +KFNP G+V+ASGSHD+EIFLWNVHGDCKNFMVL+GHKNAVLDLHWT DG+QIVSASPDK
Sbjct: 61  MKFNPAGSVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180
           T+RAWDVETGKQIKKM EH S+VNSCCP+RRGPPL+VSGSDDGTAKLWDMRQRG+IQTFP
Sbjct: 121 TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLL 240
           DKYQITAV FSDASDKIFTGGIDNDVK+WDLRKGEV MTLQGHQDMIT MQLSPDGSYLL
Sbjct: 181 DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLL 240

Query: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYI 300
           TNGMDCKLCIWDMRPYAPQNRCVK+ EGHQHNFEKNLLKC WS DGSKVTAGSSDRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 301 WDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           WDTTSRRILYKLPGH GSVNECVFHP+EPI+ SC SDKQIYLGEI
Sbjct: 301 WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345

[Close]
BLAST of CSPI05G21270 vs. TAIR10
Match: AT2G43770.1 (AT2G43770.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 647.1 bits (1668), Expect = 6.0e-186
Identity = 293/337 (86.94%), Postives = 314/337 (93.18%), Query Frame = 1 

Query: 8   ENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTLKFNPDGN 67
           EN  A  GPRPMEWSTVP++  QGPGPN K RTSSLE+PIMLLSGH SA+YT+KFNP G 
Sbjct: 7   ENETALSGPRPMEWSTVPHSASQGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGT 66

Query: 68  VVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVE 127
           ++ASGSHD+EIFLW VHGDCKNFMVL+GHKNA+LDLHWT DGSQIVSASPDKT+RAWDVE
Sbjct: 67  LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVE 126

Query: 128 TGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAV 187
           TGKQIKKMAEHSSFVNSCCPTRRGPPLI+SGSDDGTAKLWDMRQRGAIQTFPDKYQITAV
Sbjct: 127 TGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAV 186

Query: 188 SFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKL 247
           SFSDA+DKIFTGG+DNDVKVWDLRKGE  MTL+GHQD ITGM LSPDGSYLLTNGMD KL
Sbjct: 187 SFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246

Query: 248 CIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDTTSRRI 307
           C+WDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DG+KVTAGSSDRMV+IWDTTSRR 
Sbjct: 247 CVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRT 306

Query: 308 LYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           +YKLPGHTGSVNECVFHP+EPI+ SC SDK IYLGEI
Sbjct: 307 IYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343

[Close]
BLAST of CSPI05G21270 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-40
Identity = 90/296 (30.41%), Postives = 156/296 (52.70%), Query Frame = 1 

Query: 50  LSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNVHGD----CKNFMVLRGHKNAVLDLHW 109
           L+ H  A+ ++KF+ DG ++AS S DK I  + ++       +      GH+N + D+ +
Sbjct: 20  LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79

Query: 110 TVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAK 169
           + D   IVSAS DKTL+ WDVETG  IK +  H+++   C        +IVSGS D T +
Sbjct: 80  SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYA-FCVNFNPQSNMIVSGSFDETVR 139

Query: 170 LWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQD 229
           +WD+     ++  P     +TAV F+     I +   D   ++WD   G  + TL   ++
Sbjct: 140 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 199

Query: 230 M-ITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSA 289
             ++ ++ SP+G ++L   +D  L +W++       + +K + GH  N +  +       
Sbjct: 200 PPVSFVRFSPNGKFILVGTLDNTLRLWNIS----SAKFLKTYTGHV-NAQYCISSAFSVT 259

Query: 290 DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQI 340
           +G ++ +GS D  V++W+  S+++L KL GHT +V     HP+E ++AS   DK +
Sbjct: 260 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309

[Close]
BLAST of CSPI05G21270 vs. TAIR10
Match: AT4G02730.1 (AT4G02730.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 2.7e-37
Identity = 96/302 (31.79%), Postives = 154/302 (50.99%), Query Frame = 1 

Query: 50  LSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLR---GHKNAVLDLHWT 109
           L GH +AI  +KF+ DGN++AS S DK + LW+      N+ ++    GH + + DL W+
Sbjct: 39  LEGHTAAISCVKFSNDGNLLASASVDKTMILWSA----TNYSLIHRYEGHSSGISDLAWS 98

Query: 110 VDGSQIVSASPDKTLRAWDVETGKQ-IKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAK 169
            D     SAS D TLR WD  +  + +K +  H++FV  C        LIVSGS D T +
Sbjct: 99  SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFV-FCVNFNPPSNLIVSGSFDETIR 158

Query: 170 LWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQ 229
           +W+++    ++        I++V F+     I +   D   K+WD ++G  + TL     
Sbjct: 159 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 218

Query: 230 DMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSA 289
             ++  + SP+G ++L   +D  L    +  YA   + +K++ GH      N + C  SA
Sbjct: 219 PAVSFAKFSPNGKFILVATLDSTL---KLSNYAT-GKFLKVYTGHT-----NKVFCITSA 278

Query: 290 ----DGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGS--DK 340
               +G  + +GS D  VY+WD  +R IL +L GHT +V     HP +  ++S G+  DK
Sbjct: 279 FSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDK 326

[Close]
BLAST of CSPI05G21270 vs. TAIR10
Match: AT5G52820.1 (AT5G52820.1 WD-40 repeat family protein / notchless protein, putative)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 84/301 (27.91%), Postives = 143/301 (47.51%), Query Frame = 1 

Query: 50  LSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDG 109
           ++GH  A+  + F+PDG  +ASGS D  + LW+++ +   F   +GHKN VL + W+ DG
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLF-TCKGHKNWVLTVAWSPDG 164

Query: 110 SQIVSASPDKTLRAWDVETGK-QIKKMAEHSSFVN--SCCPTRRGPPL--IVSGSDDGTA 169
             +VS S    +  W+ + G+ +   +  H  ++   S  P     P    V+ S DG A
Sbjct: 165 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 224

Query: 170 KLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQ 229
           ++WD+  ++  I        +T V +      I+TG  D  +K+W+  +G+++  L+GH 
Sbjct: 225 RIWDITLKKSIICLSGHTLAVTCVKWG-GDGIIYTGSQDCTIKMWETTQGKLIRELKGHG 284

Query: 230 DMITGMQLSPDGSYLLTNGMDCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSW 289
             I  + LS +  Y+L  G       +D   R Y P     K  E  ++N  K       
Sbjct: 285 HWINSLALSTE--YVLRTG------AFDHTGRQYPPNEEKQKALE--RYNKTK------- 344

Query: 290 SADGSKVTAGSSDRMVYIWD-TTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIY 342
                ++ +GS D  +++W+ + S++   +L GH   VN   F P    +AS   DK + 
Sbjct: 345 GDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 386

[Close]
BLAST of CSPI05G21270 vs. TAIR10
Match: AT1G10580.1 (AT1G10580.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-26
Identity = 73/291 (25.09%), Postives = 133/291 (45.70%), Query Frame = 1 

Query: 51  SGHQSAIYTLKFNP-DGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDG 110
           SGH   +  ++F P  G+++ S   D ++ +W+V+   K      GH  AV D+ ++ DG
Sbjct: 279 SGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDG 338

Query: 111 SQIVSASPDKTLRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIVSGSDDGTAKLWD 170
           S+ ++A  DK ++ WD ETG+ I   +     +V    P      ++++G  D     WD
Sbjct: 339 SKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 398

Query: 171 MRQRGAIQTFPDKY-QITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMI 230
           +      Q +      +  ++F D + +  T   D  ++VW+     V+  + + H   +
Sbjct: 399 INTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 458

Query: 231 TGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGS 290
             + + P+G++L    +D ++ I+  R     N+  K F G  H       + ++S DG 
Sbjct: 459 PSISVHPNGNWLAAQSLDNQILIYSTRERFQLNK-KKRFAG--HIVAGYACQVNFSPDGR 518

Query: 291 KVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPI-VASCGSD 337
            V +G  +   + WD  S ++   L  H G      +HP E   VA+CG D
Sbjct: 519 FVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWD 566

[Close]
BLAST of CSPI05G21270 vs. NCBI nr
Match: gi|449435105|ref|XP_004135336.1| (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis sativus])

HSP 1 Score: 735.7 bits (1898), Expect = 3.7e-209
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1 

Query: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL 60
           MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 61  KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120
           KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT
Sbjct: 61  KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 344

[Close]
BLAST of CSPI05G21270 vs. NCBI nr
Match: gi|659090442|ref|XP_008446018.1| (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo])

HSP 1 Score: 730.3 bits (1884), Expect = 1.5e-207
Identity = 341/344 (99.13%), Postives = 342/344 (99.42%), Query Frame = 1 

Query: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL 60
           MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPN KQRTSSLESPIMLLSGHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 61  KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120
           KFNPDGNV+ASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT
Sbjct: 61  KFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           DTTSRRILYKLPGHTGSVNECVFHPSEPIVASC SDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI 344

[Close]
BLAST of CSPI05G21270 vs. NCBI nr
Match: gi|1009112778|ref|XP_015870114.1| (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Ziziphus jujuba])

HSP 1 Score: 686.4 bits (1770), Expect = 2.5e-194
Identity = 317/345 (91.88%), Postives = 331/345 (95.94%), Query Frame = 1 

Query: 1   MQV-PSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYT 60
           MQV P+EGENAL+ VGPRPMEWSTVPY+ PQ PG + KQRTSSLESPIMLL GHQSA+YT
Sbjct: 1   MQVAPTEGENALSIVGPRPMEWSTVPYSAPQAPGQSGKQRTSSLESPIMLLVGHQSAVYT 60

Query: 61  LKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDK 120
           +KFNP G V+ASGSHDKEIFLWNVHGDCKNFMVL+GHKNA+LDLHWT DGSQI+SASPDK
Sbjct: 61  MKFNPAGTVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK 120

Query: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180
           TLRAWDVETGKQIKKMAEHSSFVNSCCP+RRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP
Sbjct: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180

Query: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLL 240
           DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV MTLQGHQDMITGM LSPDGSYLL
Sbjct: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVTMTLQGHQDMITGMSLSPDGSYLL 240

Query: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYI 300
           TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS+DGSKVTAGSSDRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSSDGSKVTAGSSDRMVYI 300

Query: 301 WDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           WDTT+RRILYKLPGHTGSVNECVFHPSEPI+ SC SDKQIYLGEI
Sbjct: 301 WDTTTRRILYKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 345

[Close]
BLAST of CSPI05G21270 vs. NCBI nr
Match: gi|951071815|ref|XP_014491385.1| (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Vigna radiata var. radiata])

HSP 1 Score: 681.0 bits (1756), Expect = 1.1e-192
Identity = 311/345 (90.14%), Postives = 329/345 (95.36%), Query Frame = 1 

Query: 1   MQV-PSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYT 60
           MQV PSEGE+AL+ VGPRPMEWSTVPYN PQ PGPN KQRTSSLESPIMLLSGHQSAIYT
Sbjct: 1   MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 61  LKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDK 120
           +KFNP G+VVASGSHD+EIFLWNVHGDCKNFMVL+GHKNAVLDLHWT DG+QI+SASPDK
Sbjct: 61  MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIISASPDK 120

Query: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180
           T+RAWDVETGKQIKKM EH S+VN+CCP+RRGPPL+VSGSDDGTAKLWDMRQRG+IQTFP
Sbjct: 121 TVRAWDVETGKQIKKMVEHLSYVNACCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLL 240
           DKYQITAV FSDASDKIFTGGIDNDVK+WDLRKGEV MTLQGHQDMITGMQLSPDGSYLL
Sbjct: 181 DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLL 240

Query: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYI 300
           TNGMDCKLCIWDMRPYAPQNRCVK+ EGHQHNFEKNLLKC WS DGSKVTAGSSDRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 301 WDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           WDTTSRRILYKLPGH GSVNECVFHP+EPI+ SCGSDKQIYLGEI
Sbjct: 301 WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCGSDKQIYLGEI 345

[Close]
BLAST of CSPI05G21270 vs. NCBI nr
Match: gi|593797892|ref|XP_007161984.1| (hypothetical protein PHAVU_001G114300g [Phaseolus vulgaris])

HSP 1 Score: 679.1 bits (1751), Expect = 4.1e-192
Identity = 312/345 (90.43%), Postives = 327/345 (94.78%), Query Frame = 1 

Query: 1   MQV-PSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYT 60
           MQV PSEGE+AL+ VGPRPMEWSTVPYN PQ PGPN KQRTSSLESPIMLLSGHQS IYT
Sbjct: 1   MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSVIYT 60

Query: 61  LKFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDK 120
           +KFNP G+VVASGSHD+EIFLWNVHGDCKNFMVL+GHKNAVLDLHWT DG+QIVSASPDK
Sbjct: 61  MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180
           T+RAWDVETGKQIKKM EH S+VNSCCP+RRGPPL+VSGSDDGTAKLWDMRQRG+IQTFP
Sbjct: 121 TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLL 240
           DKYQITAV FSDASDKIFTGGIDNDVK+WDLRKGEV MTLQGHQDMIT MQLSPDGSYLL
Sbjct: 181 DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSMQLSPDGSYLL 240

Query: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYI 300
           TNGMDCKLCIWDMRPYAPQNRCVK+FEGHQHNFEKNLLKC WS DGSKVTAGSSDRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKVFEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 301 WDTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 345
           WDTTSRRILYKLPGH GSVNECVFHP+EPIV SC SDKQIYLGEI
Sbjct: 301 WDTTSRRILYKLPGHNGSVNECVFHPNEPIVGSCSSDKQIYLGEI 345

The following BLAST results are available for this feature:
BLAST of CSPI05G21270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SNR40_HUMAN5.2e-12360.78U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens GN=SNRNP40 PE=... [more]
SNR40_MOUSE8.9e-12360.13U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=... [more]
SNR40_BOVIN1.2e-12260.46U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus GN=SNRNP40 PE=2 ... [more]
SNR40_PONAB4.9e-12160.13U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii GN=SNRNP40 PE=... [more]
SNR40_DICDI6.0e-11157.47U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum GN... [more]
BLAST of CSPI05G21270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTB1_CUCSA2.5e-209100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G588760 PE=4 SV=1[more]
V7CX72_PHAVU2.8e-19290.43Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G114300g PE=4 SV=1[more]
I1N8B6_SOYBN6.3e-19290.14Uncharacterized protein OS=Glycine max GN=GLYMA_19G114900 PE=4 SV=1[more]
A0A0L9U747_PHAAN8.2e-19289.86Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g195800 PE=4 SV=1[more]
A0A0B2RQU6_GLYSO8.2e-19289.86U5 small nuclear ribonucleoprotein 40 kDa protein OS=Glycine soja GN=glysoja_011... [more]
BLAST of CSPI05G21270 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43770.16.0e-18686.94 Transducin/WD40 repeat-like superfamily protein[more]
AT3G49660.11.5e-4030.41 Transducin/WD40 repeat-like superfamily protein[more]
AT4G02730.12.7e-3731.79 Transducin/WD40 repeat-like superfamily protein[more]
AT5G52820.11.4e-2827.91 WD-40 repeat family protein / notchless protein, putative[more]
AT1G10580.11.3e-2625.09 Transducin/WD40 repeat-like superfamily protein[more]
BLAST of CSPI05G21270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435105|ref|XP_004135336.1|3.7e-209100.00PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis sativus][more]
gi|659090442|ref|XP_008446018.1|1.5e-20799.13PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo][more]
gi|1009112778|ref|XP_015870114.1|2.5e-19491.88PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Ziziphus jujuba][more]
gi|951071815|ref|XP_014491385.1|1.1e-19290.14PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Vigna radiata var.... [more]
gi|593797892|ref|XP_007161984.1|4.1e-19290.43hypothetical protein PHAVU_001G114300g [Phaseolus vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0016573 histone acetylation
biological_process GO:0008150 biological_process
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005575 cellular_component
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G21270.1CSPI05G21270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 184..209
score: 0.0083coord: 88..125
score: 4.6E-4coord: 260..301
score: 1.2E-5coord: 214..251
score: 8.0E-6coord: 130..168
score: 4.4E-4coord: 307..341
score: 0.0013coord: 46..82
score: 2.
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 258..301
score: 1.3E-5coord: 43..82
score: 3.9E-9coord: 304..343
score: 1.4E-4coord: 86..125
score: 2.0E-7coord: 171..209
score: 3.2E-4coord: 128..168
score: 1.6E-7coord: 212..251
score: 1.
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 135..177
score: 10.542coord: 50..83
score: 16.056coord: 311..344
score: 9.606coord: 219..253
score: 13.516coord: 93..134
score: 16.022coord: 280..310
score: 10.041coord: 184..218
score: 1
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 43..341
score: 3.0
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 50..344
score: 57
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 47..341
score: 1.6
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 196..210
score: -coord: 155..169
score: -coord: 288..302
score: -coord: 112..126
score: -coord: 69..83
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 196..210
score: 4.5E-8coord: 112..126
score: 4.5E-8coord: 155..169
score: 4.
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 45..344
score: 4.5E
NoneNo IPR availablePANTHERPTHR22847:SF501U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEINcoord: 45..344
score: 4.5E