CSPI04G26510 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G26510
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 23613537 .. 23613804 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCCGCTGAAGCAGAGCGTCCCATTGTGCGGACCACCCCGCGGGTTCGCATTCATTTCAGCCGGCGGCTGTCAGATTATTGATCAAGGGGAATTCCCCCTCTTTCGTGGTCCCCAGTTCTCCTTCCTCCACGTGTTCCCTTCCCATTCGCTTATTCCAAGCGTGCTTCCTCCCCGGTCCCCACTTTTGTGGTCCAAACGCCTTCCTCTCGACGCGTGTCGACCCGTCCTTGTCCCGCGAGTGGCGGAGAGAGAACCGACGTAA

mRNA sequence

ATGGGTCCCGCTGAAGCAGAGCGTCCCATTGTGCGGACCACCCCGCGGATTATTGATCAAGGGGAATTCCCCCTCTTTCGTGGTCCCCAGTTCTCCTTCCTCCACGTGTTCCCTTCCCATTCGCTTATTCCAAGCGTGCTTCCTCCCCGGTCCCCACTTTTGTGGTCCAAACGCCTTCCTCTCGACGCGTGTCGACCCGTCCTTGTCCCGCGAGTGGCGGAGAGAGAACCGACGTAA

Coding sequence (CDS)

ATGGGTCCCGCTGAAGCAGAGCGTCCCATTGTGCGGACCACCCCGCGGATTATTGATCAAGGGGAATTCCCCCTCTTTCGTGGTCCCCAGTTCTCCTTCCTCCACGTGTTCCCTTCCCATTCGCTTATTCCAAGCGTGCTTCCTCCCCGGTCCCCACTTTTGTGGTCCAAACGCCTTCCTCTCGACGCGTGTCGACCCGTCCTTGTCCCGCGAGTGGCGGAGAGAGAACCGACGTAA
Homology
[Close]
BLAST of CSPI04G26510 vs. TrEMBL
Match: A0A0A0L0H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652720 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.8e-26
Identity = 64/78 (82.05%), Postives = 64/78 (82.05%), Query Frame = 1 

Query: 1  MGPAEAERPIVRTTPRIIDQGEFPLFRGPQFSFLHVFPSHSLIPSVLPPRSPLLWSKRLP 60
          MGPAEAERPIVRTTPR              FSFLHVFPSHSLIPSVLPPRSPLLWSKRLP
Sbjct: 1  MGPAEAERPIVRTTPR--------------FSFLHVFPSHSLIPSVLPPRSPLLWSKRLP 60

Query: 61 LDACRPVLVPRVAEREPT 79
          LDACRPVLVPRVAEREPT
Sbjct: 61 LDACRPVLVPRVAEREPT 64

[Close]
BLAST of CSPI04G26510 vs. NCBI nr
Match: gi|700200302|gb|KGN55460.1| (hypothetical protein Csa_4G652720 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 4.0e-26
Identity = 64/78 (82.05%), Postives = 64/78 (82.05%), Query Frame = 1 

Query: 1  MGPAEAERPIVRTTPRIIDQGEFPLFRGPQFSFLHVFPSHSLIPSVLPPRSPLLWSKRLP 60
          MGPAEAERPIVRTTPR              FSFLHVFPSHSLIPSVLPPRSPLLWSKRLP
Sbjct: 1  MGPAEAERPIVRTTPR--------------FSFLHVFPSHSLIPSVLPPRSPLLWSKRLP 60

Query: 61 LDACRPVLVPRVAEREPT 79
          LDACRPVLVPRVAEREPT
Sbjct: 61 LDACRPVLVPRVAEREPT 64

The following BLAST results are available for this feature:
BLAST of CSPI04G26510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G26510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0H7_CUCSA2.8e-2682.05Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652720 PE=4 SV=1[more]
BLAST of CSPI04G26510 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G26510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200302|gb|KGN55460.1|4.0e-2682.05hypothetical protein Csa_4G652720 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G26510.1CSPI04G26510.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G26510Csa4G652720Cucumber (Chinese Long) v2cpicuB181
CSPI04G26510CsaV3_4G036870Cucumber (Chinese Long) v3cpicucB212
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G26510Cucurbita pepo (Zucchini)cpecpiB111
CSPI04G26510Cucurbita pepo (Zucchini)cpecpiB577
CSPI04G26510Cucurbita pepo (Zucchini)cpecpiB682
CSPI04G26510Cucurbita pepo (Zucchini)cpecpiB784
CSPI04G26510Cucurbita pepo (Zucchini)cpecpiB834
CSPI04G26510Bottle gourd (USVL1VR-Ls)cpilsiB285
CSPI04G26510Bottle gourd (USVL1VR-Ls)cpilsiB318
CSPI04G26510Melon (DHL92) v3.6.1cpimedB277
CSPI04G26510Melon (DHL92) v3.6.1cpimedB302
CSPI04G26510Cucumber (Gy14) v2cgybcpiB027
CSPI04G26510Cucumber (Gy14) v2cgybcpiB075
CSPI04G26510Cucumber (Gy14) v2cgybcpiB169
CSPI04G26510Cucumber (Gy14) v2cgybcpiB321
CSPI04G26510Silver-seed gourdcarcpiB0161
CSPI04G26510Silver-seed gourdcarcpiB0666
CSPI04G26510Silver-seed gourdcarcpiB0700
CSPI04G26510Silver-seed gourdcarcpiB1017
CSPI04G26510Cucumber (Chinese Long) v3cpicucB207
CSPI04G26510Watermelon (97103) v2cpiwmbB315
CSPI04G26510Watermelon (97103) v2cpiwmbB341
CSPI04G26510Watermelon (97103) v2cpiwmbB348
CSPI04G26510Wax gourdcpiwgoB390
CSPI04G26510Wax gourdcpiwgoB421
CSPI04G26510Wax gourdcpiwgoB429
CSPI04G26510Wild cucumber (PI 183967)cpicpiB075
CSPI04G26510Wild cucumber (PI 183967)cpicpiB168
CSPI04G26510Cucumber (Gy14) v1cgycpiB246
CSPI04G26510Cucumber (Gy14) v1cgycpiB409
CSPI04G26510Cucurbita maxima (Rimu)cmacpiB020
CSPI04G26510Cucurbita maxima (Rimu)cmacpiB078
CSPI04G26510Cucurbita maxima (Rimu)cmacpiB131
CSPI04G26510Cucurbita maxima (Rimu)cmacpiB189
CSPI04G26510Cucurbita maxima (Rimu)cmacpiB472
CSPI04G26510Cucurbita maxima (Rimu)cmacpiB809
CSPI04G26510Cucurbita moschata (Rifu)cmocpiB011
CSPI04G26510Cucurbita moschata (Rifu)cmocpiB071
CSPI04G26510Cucurbita moschata (Rifu)cmocpiB122
CSPI04G26510Cucurbita moschata (Rifu)cmocpiB173
CSPI04G26510Cucurbita moschata (Rifu)cmocpiB461
CSPI04G26510Cucurbita moschata (Rifu)cmocpiB794
CSPI04G26510Cucumber (Chinese Long) v2cpicuB176
CSPI04G26510Cucumber (Chinese Long) v2cpicuB206
CSPI04G26510Melon (DHL92) v3.5.1cpimeB271
CSPI04G26510Melon (DHL92) v3.5.1cpimeB281
CSPI04G26510Melon (DHL92) v3.5.1cpimeB311
CSPI04G26510Watermelon (Charleston Gray)cpiwcgB326
CSPI04G26510Watermelon (Charleston Gray)cpiwcgB352
CSPI04G26510Watermelon (97103) v1cpiwmB302
CSPI04G26510Watermelon (97103) v1cpiwmB325