CSPI04G14020 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G14020
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 11893756 .. 11893935 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAAACTACTGAACCAACAAGGTCCAAAGCAACGAAGGGCAGGCTGCCTCCTAAAAGAGGAAGTATCAAACTAAAAATAATATCCAAGCTCTATGCTGTGGTGATTGGCTTTGCATCAAAATTAGCAGGACGACAGAACAAAAAGAGTGTAGATCAAGCAACAACAGAAGAACCA

mRNA sequence

ATGGACAAAACTACTGAACCAACAAGGTCCAAAGCAACGAAGGGCAGGCTGCCTCCTAAAAGAGGAAGTATCAAACTAAAAATAATATCCAAGCTCTATGCTGTGGTGATTGGCTTTGCATCAAAATTAGCAGGACGACAGAACAAAAAGAGTGTAGATCAAGCAACAACAGAAGAACCA

Coding sequence (CDS)

ATGGACAAAACTACTGAACCAACAAGGTCCAAAGCAACGAAGGGCAGGCTGCCTCCTAAAAGAGGAAGTATCAAACTAAAAATAATATCCAAGCTCTATGCTGTGGTGATTGGCTTTGCATCAAAATTAGCAGGACGACAGAACAAAAAGAGTGTAGATCAAGCAACAACAGAAGAACCA
Homology
[Close]
BLAST of CSPI04G14020 vs. TrEMBL
Match: A0A0A0KZD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G292990 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.7e-23
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MDKTTEPTRSKATKGRLPPKRGSIKLKIISKLYAVVIGFASKLAGRQNKKSVDQATTEEP 60
          MDKTTEPTRSKATKGRLPPKRGSIKLKIISKLYAVVIGFASKLAGRQNKKSVDQATTEEP
Sbjct: 1  MDKTTEPTRSKATKGRLPPKRGSIKLKIISKLYAVVIGFASKLAGRQNKKSVDQATTEEP 60

[Close]
BLAST of CSPI04G14020 vs. NCBI nr
Match: gi|700199031|gb|KGN54189.1| (hypothetical protein Csa_4G292990 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 2.4e-23
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MDKTTEPTRSKATKGRLPPKRGSIKLKIISKLYAVVIGFASKLAGRQNKKSVDQATTEEP 60
          MDKTTEPTRSKATKGRLPPKRGSIKLKIISKLYAVVIGFASKLAGRQNKKSVDQATTEEP
Sbjct: 1  MDKTTEPTRSKATKGRLPPKRGSIKLKIISKLYAVVIGFASKLAGRQNKKSVDQATTEEP 60

The following BLAST results are available for this feature:
BLAST of CSPI04G14020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G14020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZD8_CUCSA1.7e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G292990 PE=4 SV=1[more]
BLAST of CSPI04G14020 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G14020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199031|gb|KGN54189.1|2.4e-23100.00hypothetical protein Csa_4G292990 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G14020.1CSPI04G14020.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G14020Csa4G292990Cucumber (Chinese Long) v2cpicuB181
CSPI04G14020CsaV3_4G024360Cucumber (Chinese Long) v3cpicucB212
CSPI04G14020Cp4.1LG10g09060Cucurbita pepo (Zucchini)cpecpiB065
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G14020Cucumber (Chinese Long) v3cpicucB209
CSPI04G14020Cucumber (Chinese Long) v3cpicucB241
CSPI04G14020Watermelon (97103) v2cpiwmbB280
CSPI04G14020Watermelon (97103) v2cpiwmbB295
CSPI04G14020Watermelon (97103) v2cpiwmbB307
CSPI04G14020Wax gourdcpiwgoB359
CSPI04G14020Wax gourdcpiwgoB410
CSPI04G14020Wild cucumber (PI 183967)cpicpiB107
CSPI04G14020Wild cucumber (PI 183967)cpicpiB153
CSPI04G14020Wild cucumber (PI 183967)cpicpiB162
CSPI04G14020Cucumber (Gy14) v1cgycpiB055
CSPI04G14020Cucumber (Gy14) v1cgycpiB460
CSPI04G14020Cucurbita maxima (Rimu)cmacpiB266
CSPI04G14020Cucurbita maxima (Rimu)cmacpiB852
CSPI04G14020Cucurbita maxima (Rimu)cmacpiB876
CSPI04G14020Cucurbita moschata (Rifu)cmocpiB254
CSPI04G14020Cucurbita moschata (Rifu)cmocpiB834
CSPI04G14020Cucurbita moschata (Rifu)cmocpiB856
CSPI04G14020Cucumber (Chinese Long) v2cpicuB178
CSPI04G14020Cucumber (Chinese Long) v2cpicuB191
CSPI04G14020Cucumber (Chinese Long) v2cpicuB200
CSPI04G14020Melon (DHL92) v3.5.1cpimeB264
CSPI04G14020Melon (DHL92) v3.5.1cpimeB288
CSPI04G14020Watermelon (Charleston Gray)cpiwcgB282
CSPI04G14020Watermelon (Charleston Gray)cpiwcgB304
CSPI04G14020Watermelon (Charleston Gray)cpiwcgB305
CSPI04G14020Watermelon (Charleston Gray)cpiwcgB316
CSPI04G14020Watermelon (97103) v1cpiwmB292
CSPI04G14020Watermelon (97103) v1cpiwmB345
CSPI04G14020Watermelon (97103) v1cpiwmB354
CSPI04G14020Watermelon (97103) v1cpiwmB355
CSPI04G14020Cucurbita pepo (Zucchini)cpecpiB497
CSPI04G14020Cucurbita pepo (Zucchini)cpecpiB621
CSPI04G14020Cucurbita pepo (Zucchini)cpecpiB873
CSPI04G14020Bottle gourd (USVL1VR-Ls)cpilsiB246
CSPI04G14020Bottle gourd (USVL1VR-Ls)cpilsiB247
CSPI04G14020Bottle gourd (USVL1VR-Ls)cpilsiB276
CSPI04G14020Melon (DHL92) v3.6.1cpimedB282
CSPI04G14020Cucumber (Gy14) v2cgybcpiB124
CSPI04G14020Cucumber (Gy14) v2cgybcpiB170
CSPI04G14020Cucumber (Gy14) v2cgybcpiB278
CSPI04G14020Silver-seed gourdcarcpiB0184
CSPI04G14020Silver-seed gourdcarcpiB0454
CSPI04G14020Silver-seed gourdcarcpiB1037