CSPI04G13830 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G13830
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	E3 ubiquitin ligase BIG BROTHER
Location	Chr4 : 11757815 .. 11762054 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGAGCTGGAACTCAAACATCGAGGTTCATTGCATGAATAACGGTTATCCTTATAGTACTGCTTCTTTTATGGAATACTTTGAAGGTCTTACGTATGATCATGTGAATTTCATTTTTTCGGGTGCCTCACATTCTCAGGTACTATAAATCTTTTTTATTTTAGATGCTCTCCATGAATGTCTTGTCTGGAAGCTGGACTTATAGAACTTGTGGCATTTAAATGCTGCTTTATCTTTACCTTATAGACTTGATTCTCTGTTCTGTAGATTTTTTGACAATTGTCTCAAGTAAAAAAGGGGAAATCATGTGACATTTCATCTTCTAACTACTTTTGGCTTCTCAACTATGGCCTTTTCATTTTGCTTTAACTTCCTGATGCATGCTTGATTTGACATTTATTCTCAAGATCAAAGGGTCTTTATATCTGATTTTCATGATTCCAAATTAATAAACTTATTTTCCCGACATGGAAGTATAATATTTTAATTTCATTCAGGAGACTGTTTGTCCATCAACTAACTCAAGTTACAAGTTTGGGCATTCTGATTTATGGAGCGCATCATACTTTGATGCTCAATCGTTTGAGGTTCAAGATCATGAATCCACTATTGATGAACACAGGAGGCCGCTCTCGACAGTCCAGAATGAACAGAGTTCAGGAAATAGCGTGTGGGAAGAAAATGCCAATCCTAATATGTCCGGTAACAGCATGGAATGTAAGGGTTAATGCCTGTTTTGTTTCAAGCTTTTGAATGAACACTATAGTATGATTGTTTGTTAAACAGAAGTTTTCAAATAGTATGATTGTTTGTTAAACAGAAGTTGTCAAGTTAAGGTAATGGAACAAACATTCAGATATTGAATGTTACGGTTCTATAAAATCACACGCTGCAAAGAAGAGATACTTATTGACTCTTTATTTAGATTATTTTTCTCAGTTCATGAATGGAGGCATTTGTAAGAGAAAGCAGTTGATGTCATCCATTTCTGGTCAATCGACAAACTTCATTTTTAGGCTGTTTATTATTTCTCTCAGTTCATAAATGATAGTGCAATATGGTTCTGAGGGTTTTCTTATGCTACATGTAGAAAAATTGGCTTGTGCCATATTAGTCATGTTGTAAGATGGGTAACTTATTCAATGCACGAAATCAAATTTAGGGTGACTTAACGAGTATCTTGTAGATGAGATACAATCTTTCTCAGTTCATAAACGATAATGTAAAATATGTTCATTTGTTTTCTTATGCTACACATAGGAAAATGGCTTTAGACGTAGTAGTCATGCTGTAAAGTGGGAAGCTTATTTGATGCAACAATTGAATTTGGGGTGATTTAATGAGTATCCTGTAAATGAGATACAATCGCACCATCCATTTATACACATATCTTCTATCATATTTCAACGTTAACTTGTAATTACTTGGTGCATCTCATTTTACCAAGTACTGTTCTGTTGTAGTATTAACTATCCTGCTAGGTATAGTACCAAAGATATGCACAAAATCTAACAGCAAAATCATAATACAGAAAAATCCTATTTTATATCATTTTATTACTCATGATTGTTTGCTCCTTTTCTTCTTTCTGATTCAATTATAATGTTTATGGAAATTTAAATACCAGTTCCTAAACTCCGTTTTTCTTTATTACTTTTTCAGGCCCTCGGAGGCATTCAAATTATCATGAGTATCAGGTCTGCAGCTTATCGATTCATAAACATGTTATGCCACTAAGTTTCAGTTGTAGTGTTAAGGTTGTTTTCGGTGGAGTACATTTTTGGTTAGTGTCCTGTATTCTGTGGTTCATGCTGGCAACCAGTCACATACTTGTGTTAATACATAAAATAAAATTATTCCTGTAAGATATAAAACTGGCTTATCTGAAATCACAGAATAAAGGAAAAGATAGAGGATATTAGAATACAAATTCATTTCTAATCCAGTGGTGACAAACTTGGTGGCGGTTCAACTCCCTTAACATCTATTATTCCAGATTTTCTATTCCGCGCCAAATAGACCTGGAATTTACAGTTCCAATGCTTCAGAAGACAACTATAAATGCATGATTCCTAATCTGTTCCATCTTGAAATGTGCAGACTATTTGGCAAGAGATTGTTGATCCTGATAACATGACTTATGAGGTTAGAGCAGCTGATTTTCTTTCCTATTTACTTTTGTATATTACTGAACAAAATGTTTTCTCCTGTAACTTTATATGTTCTTATTGAAGCTATATTTACTTCAATGGCTATTTATTATGATGGATATTGCTAATTGAAATGTTATATTACGGCCAGTCAGTAAGAAGTCTGCTGTGTAGCAAAACCAGTAGCCATTACAGCTAATAGGCTAGGTGTTGGACGCTTTCTTGCTAAGGTAGAAAGGATAGAAATGATGGCAGAAGTTAACCTAATTGTTTATTCTGCGTTTTGGTTGTTGGTACACTTCGACGTAATTTTCTATCCTTGAACTTGGTTTCTTGGAGGGCCTTACATATATACCAAAGAAAGCTTGCTTCTTTGGAGCGCTCTGCCTGTTGACGCTGCTTTTTAAGAAGCTAAAATTGATTAGATAGGAGCATAGCTGCATAAGTAATCAGCTGTAAATCCACTCAATACATTCTGAAATCAAGTTCCATGTTTAATAAACGTAAAATTTGTCTGGCTAACTGTTATATGTAAAGTCAACTATATGCCTCCTGAATTATGTCGATTACTCTCTTCAATAAAGTGACGGTTTAAAGAAACTTATTTCAGGAATTAGTAGATTTAGGTGAGACAGTAGGAACTCAAAGTAGAGGCCTTACACAAGAACTAATTGCATTGCTTCCAGTATCGAGGTACAGATGGGGATTTTTCTCAAGGAAGAAATCACGAAATGAAAGGTAACACTAGATTGATTGATCATCTTATCTCGAAATATTTTAAACTTTGTATTATTTTTCGGTTGTTTTTTAGAATTGTTCCAGCTATCAAGATGTAGTAATTCTCACCAATGCCCTTATACTTAGTAACGCCTATAACAAGTGGGGTATCGGGGGGTTTGATAAGCAACACATAATAATTATTGCCAAGCTATGTTTATTTTGACTTGTGTACCTCATATTTTCATTTTCATTATTATTGTTAAGAACAATATACAGTTACGATGAATGATCCTTCTCAATATTATCTCATTTACTCAAAATCATCTCAATAAAGAGAGAAAACAAGTGGTTTGGCCGACTAGCCTGTCTGCTACTTGCAACGCCACCCTTTATTCAATGGGGAAGAAGGAAAACGATCAATAGATTCAAATTGGTGCACAAGCCTTCCTCATTAACTTTTTTGAGGAATTACCGATTGACAATGATATATTTCTTGCATTAATTTTTTTAACATTATATATATGAAGACACATCTTGATTTGTATACAGGTGTGTGATATGCCAAATGGAATACAAACGTGGGGATAAAATAATTACTCTACCATGCAAACACAAGTACCATACAAGTTGCGGGACCAAGTGGCTTAGTATCAAGAAGGTGACTTTCTGATATCTTTTATCCCTCTTTTAGTAAAACGTACAATCAGCAATTTTACTCAATATTGCATAATCTCTCTCCTCCAGGCATGTCCCATTTGCTACACTGAGGTTTTTGGTGACACTTCAAAACGATAAAGAAAAGAAGGAAAAGAAAAAAAAGGCTTTGATTAATTGTCATGAGAAAGGGAACCCTTAAAAAGGTTTGGAGTATACTTATTTCGTTTCCTTTCTCATTTACAGCTTTACACAATCGTCGTTTGATGTTAAAGATTAGGAGAAATCTTTGATTTCAATACAGAGGATGATAGAGCCAGATAGTAGAATTTGATTGAAATCAATTTGTTTGTTTGTTTGTTTGGTTTTGTTTTTGTTATTTTTTCAACTTGGCTCATATTGAACCACGACGACTTGGTTTTTGGCTCTACCGATTATAAATATTTCTTATTAGTTGGAGCCTGGAGGGGGCAGAATTTGATGGACAAAAATGGTCAAACTCAAAACTCAAATCCAGTTCATTTTTTTGCCTCAACGTGCTTCCTAGTTGAAGCTATGGGGGAAATAGTCTTCTTCTTCTTCTTCTTCTTCTTTTTTCTTCTTTGTTTTTTTTTTTTTTCCATTTTATATAAGCAAGTTGAGTTATACACCATAGCTTTTAATTATATAGAAAATCACCATCTCACACCTTGGAATTATCTTCTAAGAAAATCG

mRNA sequence

ATGAGCTGGAACTCAAACATCGAGGTTCATTGCATGAATAACGGTTATCCTTATAGTACTGCTTCTTTTATGGAATACTTTGAAGGTCTTACGTATGATCATGTGAATTTCATTTTTTCGGGTGCCTCACATTCTCAGGAGACTGTTTGTCCATCAACTAACTCAAGTTACAAGTTTGGGCATTCTGATTTATGGAGCGCATCATACTTTGATGCTCAATCGTTTGAGGTTCAAGATCATGAATCCACTATTGATGAACACAGGAGGCCGCTCTCGACAGTCCAGAATGAACAGAGTTCAGGAAATAGCGTGTGGGAAGAAAATGCCAATCCTAATATGTCCGGTAACAGCATGGAATGCCCTCGGAGGCATTCAAATTATCATGAGTATCAGGTCTGCAGCTTATCGATTCATAAACATGTTATGCCACTAAGTTTCAGTTGTAGTGTTAAGGTTGTTTTCGGTGGAACTATTTGGCAAGAGATTGTTGATCCTGATAACATGACTTATGAGGAATTAGTAGATTTAGGTGAGACAGTAGGAACTCAAAGTAGAGGCCTTACACAAGAACTAATTGCATTGCTTCCAGTATCGAGGTACAGATGGGGATTTTTCTCAAGGAAGAAATCACGAAATGAAAGGTGTGTGATATGCCAAATGGAATACAAACGTGGGGATAAAATAATTACTCTACCATGCAAACACAAGTACCATACAAGTTGCGGGACCAAGTGGCTTAGTATCAAGAAGGCATGTCCCATTTGCTACACTGAGGTTTTTGGTGACACTTCAAAACGATAA

Coding sequence (CDS)

ATGAGCTGGAACTCAAACATCGAGGTTCATTGCATGAATAACGGTTATCCTTATAGTACTGCTTCTTTTATGGAATACTTTGAAGGTCTTACGTATGATCATGTGAATTTCATTTTTTCGGGTGCCTCACATTCTCAGGAGACTGTTTGTCCATCAACTAACTCAAGTTACAAGTTTGGGCATTCTGATTTATGGAGCGCATCATACTTTGATGCTCAATCGTTTGAGGTTCAAGATCATGAATCCACTATTGATGAACACAGGAGGCCGCTCTCGACAGTCCAGAATGAACAGAGTTCAGGAAATAGCGTGTGGGAAGAAAATGCCAATCCTAATATGTCCGGTAACAGCATGGAATGCCCTCGGAGGCATTCAAATTATCATGAGTATCAGGTCTGCAGCTTATCGATTCATAAACATGTTATGCCACTAAGTTTCAGTTGTAGTGTTAAGGTTGTTTTCGGTGGAACTATTTGGCAAGAGATTGTTGATCCTGATAACATGACTTATGAGGAATTAGTAGATTTAGGTGAGACAGTAGGAACTCAAAGTAGAGGCCTTACACAAGAACTAATTGCATTGCTTCCAGTATCGAGGTACAGATGGGGATTTTTCTCAAGGAAGAAATCACGAAATGAAAGGTGTGTGATATGCCAAATGGAATACAAACGTGGGGATAAAATAATTACTCTACCATGCAAACACAAGTACCATACAAGTTGCGGGACCAAGTGGCTTAGTATCAAGAAGGCATGTCCCATTTGCTACACTGAGGTTTTTGGTGACACTTCAAAACGATAA

Homology

[Close]

BLAST of CSPI04G13830 vs. Swiss-Prot
Match: BB_ARATH (E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.1e-41
Identity = 95/265 (35.85%), Postives = 145/265 (54.72%), Query Frame = 1


Query: 8   EVHCMNNGYPYS-TASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSS-YKFGHSDLW 67
           + H    G+PY+ T S+M+++ G     +N+  +   H Q+ +  + N++ YKFG S   
Sbjct: 10  DAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFGFSGSD 69

Query: 68  SASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMECPRRH- 127
           +AS++   S+++ DH S +              S G + W+ +   N++ +      R  
Sbjct: 70  NASFYG--SYDMNDHLSRM--------------SIGRTNWDYHPMVNVADDPENTVARSV 129

Query: 128 -----SNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEELVDLGET 187
                  + E + C  + H    P               WQ+ +DPD MTYEELV+LGE 
Sbjct: 130 QIGDTDEHSEAEECIANEHDPDSPQ------------VSWQDDIDPDTMTYEELVELGEA 189

Query: 188 VGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHT 247
           VGT+SRGL+QELI  LP  +Y++G    +K   ERCVICQ++YK G++ + LPCKH YH+
Sbjct: 190 VGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHS 246

Query: 248 SCGTKWLSIKKACPICYTEVFGDTS 265
            C +KWLSI K CP+C +EVFG+ S
Sbjct: 250 ECISKWLSINKVCPVCNSEVFGEPS 246

[Close]

BLAST of CSPI04G13830 vs. Swiss-Prot
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 1


Query: 159 WQEIVDPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVIC 218
           W E+ DPD ++YEEL+ LG+ VGT+SRGL+ + IA LP  RY+ G    +   NE CVIC
Sbjct: 235 WDEM-DPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEG--DNQNGTNESCVIC 294

Query: 219 QMEYKRGDKIITLPCKHKYHTSCGTKWLSIKKACPICYTEVFGDTS 265
           +++Y+  + +I LPCKH YH+ C   WL I K CP+C  EV   TS
Sbjct: 295 RLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337

[Close]

BLAST of CSPI04G13830 vs. Swiss-Prot
Match: MBR2_ARATH (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.7e-17
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 1


Query: 163 VDPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEY 222
           +D DNM+YEEL+ LGE +G  S GL++E+I  +          +      E C +CQ EY
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEY 626

Query: 223 KRGDKIITLPCKHKYHTSCGTKWLSIKKACPICYT 258
             GD + TL C H++HT+C  +WL +K  CPIC T
Sbjct: 627 AEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKT 661

[Close]

BLAST of CSPI04G13830 vs. Swiss-Prot
Match: MBR1_ARATH (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 1


Query: 163 VDPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKK----SRNERCVIC 222
           +D DNM+YEEL+ LGE +G  S GL++E+I L  + +++    S          E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEPCCIC 660

Query: 223 QMEYKRGDKIITLPCKHKYHTSCGTKWLSIKKACPICYTE 259
           Q EY  GD + TL C H++H  C  +W+ IK  CPIC TE
Sbjct: 661 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

[Close]

BLAST of CSPI04G13830 vs. Swiss-Prot
Match: HIP1_ORYSJ (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP1 PE=1 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 8.1e-15
Identity = 39/93 (41.94%), Postives = 51/93 (54.84%), Query Frame = 1


Query: 163 VDPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEY 222
           +D DNM+YEEL+ L E +G  S GL++E +  L   R    +        E C ICQ EY
Sbjct: 568 LDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEASVEEEPCCICQEEY 627

Query: 223 KRGDKIITLPCKHKYHTSCGTKWLSIKKACPIC 256
             GD + TL C H +H  C  +WL +K  CPIC
Sbjct: 628 VDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]

BLAST of CSPI04G13830 vs. TrEMBL
Match: A0A0A0L1Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G290860 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 6.9e-138
Identity = 241/266 (90.60%), Postives = 241/266 (90.60%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG 60
           MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG
Sbjct: 9   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG 68

Query: 61  HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC 120
           HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC
Sbjct: 69  HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC 128

Query: 121 PRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEELVDLGETV 180
           PRRHSNYHEYQ                         TIWQEIVDPDNMTYEELVDLGETV
Sbjct: 129 PRRHSNYHEYQ-------------------------TIWQEIVDPDNMTYEELVDLGETV 188

Query: 181 GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS 240
           GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS
Sbjct: 189 GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS 248

Query: 241 CGTKWLSIKKACPICYTEVFGDTSKR 267
           CGTKWLSIKKACPICYTEVFGDTSKR
Sbjct: 249 CGTKWLSIKKACPICYTEVFGDTSKR 249

[Close]

BLAST of CSPI04G13830 vs. TrEMBL
Match: A0A0A0LX98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613470 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 6.8e-85
Identity = 170/273 (62.27%), Postives = 196/273 (71.79%), Query Frame = 1


Query: 1   MSWNSN--IEVHCMNNGYPYSTA-SFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSS- 60
           MSWNS    EVH +N  YPY+TA SF+EYFEGLTY+HVNFIFSGASHSQE V P  NS+ 
Sbjct: 1   MSWNSTPQTEVHHVNTNYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQENVYPPLNSNF 60

Query: 61  YKFGHSDLWSASYFDA-QSFEVQDHESTIDEHRR--PLSTVQNEQSSGNSVWEENANPNM 120
           YKFG SD  S SY++  Q++ + DHE  I EHRR    +T  N QS+ N  +EE  N   
Sbjct: 61  YKFGFSDFGSPSYYNPPQAYRMHDHEPIIYEHRRLENSATQPNLQSTVNPEFEEITNTIA 120

Query: 121 SGNSMECPRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEEL 180
             N +ECPRRH N H++QV                         +WQ+ VDPDNMTYEEL
Sbjct: 121 FDNHVECPRRHHNSHDFQV-------------------------VWQDNVDPDNMTYEEL 180

Query: 181 VDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPC 240
           ++LGETVGTQSRGL+QELIALLP+S+Y++ FFSRKKSR ERCVICQMEYKRGD+ ITLPC
Sbjct: 181 LELGETVGTQSRGLSQELIALLPISKYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPC 240

Query: 241 KHKYHTSCGTKWLSIKKACPICYTEVFGDTSKR 267
           KH YH  CGTKWLSI KACPICYTEVFGDTSKR
Sbjct: 241 KHIYHAGCGTKWLSINKACPICYTEVFGDTSKR 248

[Close]

BLAST of CSPI04G13830 vs. TrEMBL
Match: A0A067F1T9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025212mg PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.9e-83
Identity = 164/272 (60.29%), Postives = 196/272 (72.06%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTA-SFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSS-YK 60
           MSWN +IEVH  N  YPY++A SFMEYFEGLTY+HVNFIF GASH QE+V PST++S YK
Sbjct: 1   MSWNPHIEVHYYNTSYPYNSAGSFMEYFEGLTYEHVNFIFDGASHVQESVYPSTHTSFYK 60

Query: 61  FGHSDLWSASYFD-AQSFEVQDHESTIDEHRRP---LSTVQNEQSSG-NSVWEENANPNM 120
           FG SD  S SY+D    +EV  HE   DE+RRP    S   NEQ++  N+V E N N   
Sbjct: 61  FGLSDYGSNSYYDYGHPYEVNYHEPRNDEYRRPSENTSRSNNEQTAAVNAVPERNMNTTT 120

Query: 121 SGNSMECPRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEEL 180
             + +ECPRRH N HE+QV                         +WQ+ +DPD MTYEEL
Sbjct: 121 RESPIECPRRHQNTHEHQV-------------------------VWQDNIDPDQMTYEEL 180

Query: 181 VDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPC 240
           ++LGETVGTQSRGL+QELI+LLP+S+Y+ GFF+RK+SRNERCVICQMEYKRGD+ +TLPC
Sbjct: 181 LELGETVGTQSRGLSQELISLLPISKYKCGFFTRKRSRNERCVICQMEYKRGDRRMTLPC 240

Query: 241 KHKYHTSCGTKWLSIKKACPICYTEVFGDTSK 266
           KH YH  CGT+WLSI KACPICYTEVFGD+SK
Sbjct: 241 KHVYHAGCGTRWLSINKACPICYTEVFGDSSK 247

[Close]

BLAST of CSPI04G13830 vs. TrEMBL
Match: A0A061GTY3_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_040623 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.3e-80
Identity = 160/272 (58.82%), Postives = 194/272 (71.32%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTA-SFMEYFEGLTYDHVNFIFSGASHSQETVCPS-TNSSYK 60
           MSWN ++EV  +N+ YPY++A SFMEYFEGLTY HVNFIF GASH QE+V PS T+S YK
Sbjct: 1   MSWNPHMEVQYINSSYPYNSAGSFMEYFEGLTYQHVNFIFDGASHVQESVYPSMTSSFYK 60

Query: 61  FGHSDLWSASYFD-AQSFEVQDHESTIDEHRRPL---STVQNEQSSG-NSVWEENANPNM 120
           FG SD  + SY+D   ++EV +HE  +DE+RR     S++ NEQ++  N  WE N N   
Sbjct: 61  FGLSDSGNISYYDHGHNYEVNNHELCVDEYRRASENSSSMSNEQTAAMNMEWEGNVNTMS 120

Query: 121 SGNSMECPRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEEL 180
             N ++CPRR  N  +YQV                         +WQ+ VDPDNMTYEEL
Sbjct: 121 RENPVDCPRRQHNGLDYQV-------------------------VWQDSVDPDNMTYEEL 180

Query: 181 VDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPC 240
           ++LGETVGTQSRGL+QELI+LLPVS+Y+   FSRKKSRNERCVICQMEYKRG++ ITLPC
Sbjct: 181 LELGETVGTQSRGLSQELISLLPVSKYKCSLFSRKKSRNERCVICQMEYKRGERRITLPC 240

Query: 241 KHKYHTSCGTKWLSIKKACPICYTEVFGDTSK 266
           KH YH  CG++WLSI KACPICYTEVFGD SK
Sbjct: 241 KHVYHAGCGSRWLSINKACPICYTEVFGDASK 247

[Close]

BLAST of CSPI04G13830 vs. TrEMBL
Match: A0A0D2TL58_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G072700 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.3e-80
Identity = 162/274 (59.12%), Postives = 195/274 (71.17%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTA-SFMEYFEGLTYDHVNFIFSGASHSQETVCPS-TNSSYK 60
           MSW+ ++EV  +N+ YPY++A SF+EYFEGLTY HVNFIF GASH QE+V PS T+S YK
Sbjct: 1   MSWDPHMEVQYINSNYPYNSAGSFIEYFEGLTYQHVNFIFDGASHVQESVYPSMTSSFYK 60

Query: 61  FGHSDLWSASYFDAQ---SFEVQDHESTIDEHRRPLSTV---QNEQSSGNSV-WEENANP 120
           FG SD  S SY+D +   S+EV +HE  IDE+RR         NEQ++  +V WE NA+ 
Sbjct: 61  FGPSDSGSISYYDHRNDHSYEVNNHELCIDEYRRASENSLSGSNEQTAAMNVEWERNAHA 120

Query: 121 NMSGNSMECPRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYE 180
               NS++CPRR  N H+YQV                         IWQ+ VDPDNMTYE
Sbjct: 121 TSLENSVDCPRRQHNAHDYQV-------------------------IWQDCVDPDNMTYE 180

Query: 181 ELVDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITL 240
           EL++LGE+VGTQSRGLTQELI+LLPVS+Y+   FSRKKSR ERCVICQMEYKRG++ ITL
Sbjct: 181 ELLELGESVGTQSRGLTQELISLLPVSKYKCSLFSRKKSRKERCVICQMEYKRGERQITL 240

Query: 241 PCKHKYHTSCGTKWLSIKKACPICYTEVFGDTSK 266
           PCKH YH  CGT+WLSI KACPICYTEVFG+ SK
Sbjct: 241 PCKHVYHAGCGTRWLSINKACPICYTEVFGNGSK 249

[Close]

BLAST of CSPI04G13830 vs. TAIR10
Match: AT3G63530.1 (AT3G63530.1 RING/U-box superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-42
Identity = 95/265 (35.85%), Postives = 145/265 (54.72%), Query Frame = 1


Query: 8   EVHCMNNGYPYS-TASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSS-YKFGHSDLW 67
           + H    G+PY+ T S+M+++ G     +N+  +   H Q+ +  + N++ YKFG S   
Sbjct: 10  DAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFGFSGSD 69

Query: 68  SASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMECPRRH- 127
           +AS++   S+++ DH S +              S G + W+ +   N++ +      R  
Sbjct: 70  NASFYG--SYDMNDHLSRM--------------SIGRTNWDYHPMVNVADDPENTVARSV 129

Query: 128 -----SNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEELVDLGET 187
                  + E + C  + H    P               WQ+ +DPD MTYEELV+LGE 
Sbjct: 130 QIGDTDEHSEAEECIANEHDPDSPQ------------VSWQDDIDPDTMTYEELVELGEA 189

Query: 188 VGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHT 247
           VGT+SRGL+QELI  LP  +Y++G    +K   ERCVICQ++YK G++ + LPCKH YH+
Sbjct: 190 VGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHS 246

Query: 248 SCGTKWLSIKKACPICYTEVFGDTS 265
            C +KWLSI K CP+C +EVFG+ S
Sbjct: 250 ECISKWLSINKVCPVCNSEVFGEPS 246

[Close]

BLAST of CSPI04G13830 vs. TAIR10
Match: AT3G19910.1 (AT3G19910.1 RING/U-box superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 9.9e-27
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 1


Query: 159 WQEIVDPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVIC 218
           W E+ DPD ++YEEL+ LG+ VGT+SRGL+ + IA LP  RY+ G    +   NE CVIC
Sbjct: 235 WDEM-DPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEG--DNQNGTNESCVIC 294

Query: 219 QMEYKRGDKIITLPCKHKYHTSCGTKWLSIKKACPICYTEVFGDTS 265
           +++Y+  + +I LPCKH YH+ C   WL I K CP+C  EV   TS
Sbjct: 295 RLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337

[Close]

BLAST of CSPI04G13830 vs. TAIR10
Match: AT5G52140.1 (AT5G52140.1 RING/U-box superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1


Query: 164 DPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSRY-----RWGFFSRKK---SRNERC 223
           DP+NMTYEEL +LG++VG   +GL+QE I+ L   +Y      W     KK   + + +C
Sbjct: 175 DPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQC 234

Query: 224 VICQMEYKRGDKIITLPCKHKYHTSCGTKWLSIKKACPICYTEVF 261
            IC MEY +GDKI TLPCKH YH  C ++WL   K C IC  EV+
Sbjct: 235 SICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279

[Close]

BLAST of CSPI04G13830 vs. TAIR10
Match: AT3G47180.1 (AT3G47180.1 RING/U-box superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-22
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 1


Query: 160 QEIVDPDNMTYEELVDLGETVGTQSRGLTQ-ELIALLPVSRYRWGFFSRKKSRNERCVIC 219
           ++ +DPD ++YEEL+ LG+ +G ++RGLT  E+   L  S Y    FS  K+  +RCV+C
Sbjct: 109 EDEIDPDQLSYEELIALGDFIGVENRGLTPIEISTCLNASTY---VFSHNKNEIDRCVVC 168

Query: 220 QMEYKRGDKIITL-PCKHKYHTSCGTKWLSIKKACPICYTE 259
           QME++  + ++ L PC H YH+ C TKWL  KK CPIC +E
Sbjct: 169 QMEFEERESLVVLRPCDHPYHSECITKWLETKKICPICCSE 206

[Close]

BLAST of CSPI04G13830 vs. TAIR10
Match: AT5G24870.1 (AT5G24870.1 RING/U-box superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 1


Query: 163 VDPDNMTYEELVDLGETVGTQSRGLTQE-LIALLPVSRYRWGFFSR----KKSRNERCVI 222
           +D DNM+YEEL+ L E +GT S  L++E L+  L  S YR    S      K  + +C I
Sbjct: 411 LDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCSI 470

Query: 223 CQMEYKRGDKIITLPCKHKYHTSCGTKWLSIKKACPICYT 258
           CQ EY  GD++ TLPC+HKYH SC  +WL +K  CPIC T
Sbjct: 471 CQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKT 510

[Close]

BLAST of CSPI04G13830 vs. NCBI nr
Match: gi|449448944|ref|XP_004142225.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis sativus])

HSP 1 Score: 498.0 bits (1281), Expect = 9.9e-138
Identity = 241/266 (90.60%), Postives = 241/266 (90.60%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG 60
           MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG 60

Query: 61  HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC 120
           HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC
Sbjct: 61  HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC 120

Query: 121 PRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEELVDLGETV 180
           PRRHSNYHEYQ                         TIWQEIVDPDNMTYEELVDLGETV
Sbjct: 121 PRRHSNYHEYQ-------------------------TIWQEIVDPDNMTYEELVDLGETV 180

Query: 181 GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS 240
           GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS
Sbjct: 181 GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS 240

Query: 241 CGTKWLSIKKACPICYTEVFGDTSKR 267
           CGTKWLSIKKACPICYTEVFGDTSKR
Sbjct: 241 CGTKWLSIKKACPICYTEVFGDTSKR 241

[Close]

BLAST of CSPI04G13830 vs. NCBI nr
Match: gi|700199013|gb|KGN54171.1| (hypothetical protein Csa_4G290860 [Cucumis sativus])

HSP 1 Score: 498.0 bits (1281), Expect = 9.9e-138
Identity = 241/266 (90.60%), Postives = 241/266 (90.60%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG 60
           MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG
Sbjct: 9   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG 68

Query: 61  HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC 120
           HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC
Sbjct: 69  HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC 128

Query: 121 PRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEELVDLGETV 180
           PRRHSNYHEYQ                         TIWQEIVDPDNMTYEELVDLGETV
Sbjct: 129 PRRHSNYHEYQ-------------------------TIWQEIVDPDNMTYEELVDLGETV 188

Query: 181 GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS 240
           GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS
Sbjct: 189 GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS 248

Query: 241 CGTKWLSIKKACPICYTEVFGDTSKR 267
           CGTKWLSIKKACPICYTEVFGDTSKR
Sbjct: 249 CGTKWLSIKKACPICYTEVFGDTSKR 249

[Close]

BLAST of CSPI04G13830 vs. NCBI nr
Match: gi|778693179|ref|XP_011653591.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis sativus])

HSP 1 Score: 481.1 bits (1237), Expect = 1.3e-132
Identity = 236/266 (88.72%), Postives = 236/266 (88.72%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG 60
           MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSYKFG 60

Query: 61  HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSMEC 120
           HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSG     
Sbjct: 61  HSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSG----- 120

Query: 121 PRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEELVDLGETV 180
           PRRHSNYHEYQ                         TIWQEIVDPDNMTYEELVDLGETV
Sbjct: 121 PRRHSNYHEYQ-------------------------TIWQEIVDPDNMTYEELVDLGETV 180

Query: 181 GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS 240
           GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS
Sbjct: 181 GTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTS 236

Query: 241 CGTKWLSIKKACPICYTEVFGDTSKR 267
           CGTKWLSIKKACPICYTEVFGDTSKR
Sbjct: 241 CGTKWLSIKKACPICYTEVFGDTSKR 236

[Close]

BLAST of CSPI04G13830 vs. NCBI nr
Match: gi|659097625|ref|XP_008449725.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X1 [Cucumis melo])

HSP 1 Score: 473.4 bits (1217), Expect = 2.6e-130
Identity = 231/267 (86.52%), Postives = 235/267 (88.01%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSY-KF 60
           MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQ+TVCPSTNSSY KF
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQDTVCPSTNSSYYKF 60

Query: 61  GHSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSME 120
           G+SDLWS SYFDAQ FEVQDHES I EHRRPLSTVQNEQS GNSVWEENANPNMSGNSME
Sbjct: 61  GNSDLWSTSYFDAQLFEVQDHESAIYEHRRPLSTVQNEQSLGNSVWEENANPNMSGNSME 120

Query: 121 CPRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEELVDLGET 180
           CPRRHSNYHEYQ                         TIWQ+IVDPDNMTYEELVDLGET
Sbjct: 121 CPRRHSNYHEYQ-------------------------TIWQDIVDPDNMTYEELVDLGET 180

Query: 181 VGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHT 240
           VGTQSRGLTQELIALLPVS YRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKH+YHT
Sbjct: 181 VGTQSRGLTQELIALLPVSSYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHRYHT 240

Query: 241 SCGTKWLSIKKACPICYTEVFGDTSKR 267
           SCGTKWLSIKKACPICYTEVFGDTSKR
Sbjct: 241 SCGTKWLSIKKACPICYTEVFGDTSKR 242

[Close]

BLAST of CSPI04G13830 vs. NCBI nr
Match: gi|659097627|ref|XP_008449726.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X2 [Cucumis melo])

HSP 1 Score: 456.4 bits (1173), Expect = 3.3e-125
Identity = 226/267 (84.64%), Postives = 230/267 (86.14%), Query Frame = 1


Query: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSSY-KF 60
           MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQ+TVCPSTNSSY KF
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQDTVCPSTNSSYYKF 60

Query: 61  GHSDLWSASYFDAQSFEVQDHESTIDEHRRPLSTVQNEQSSGNSVWEENANPNMSGNSME 120
           G+SDLWS SYFDAQ FEVQDHES I EHRRPLSTVQNEQS GNSVWEENANPNMSG    
Sbjct: 61  GNSDLWSTSYFDAQLFEVQDHESAIYEHRRPLSTVQNEQSLGNSVWEENANPNMSG---- 120

Query: 121 CPRRHSNYHEYQVCSLSIHKHVMPLSFSCSVKVVFGGTIWQEIVDPDNMTYEELVDLGET 180
            PRRHSNYHEYQ                         TIWQ+IVDPDNMTYEELVDLGET
Sbjct: 121 -PRRHSNYHEYQ-------------------------TIWQDIVDPDNMTYEELVDLGET 180

Query: 181 VGTQSRGLTQELIALLPVSRYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHT 240
           VGTQSRGLTQELIALLPVS YRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKH+YHT
Sbjct: 181 VGTQSRGLTQELIALLPVSSYRWGFFSRKKSRNERCVICQMEYKRGDKIITLPCKHRYHT 237

Query: 241 SCGTKWLSIKKACPICYTEVFGDTSKR 267
           SCGTKWLSIKKACPICYTEVFGDTSKR
Sbjct: 241 SCGTKWLSIKKACPICYTEVFGDTSKR 237

The following BLAST results are available for this feature:

BLAST of CSPI04G13830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BB_ARATH	5.1e-41	35.85	E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1	[more]
BBR_ARATH	1.7e-25	49.06	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1	[more]
MBR2_ARATH	8.7e-17	42.11	E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1	[more]
MBR1_ARATH	1.3e-15	43.00	E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1	[more]
HIP1_ORYSJ	8.1e-15	41.94	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP...	[more]

BLAST of CSPI04G13830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1Z5_CUCSA	6.9e-138	90.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G290860 PE=4 SV=1	[more]
A0A0A0LX98_CUCSA	6.8e-85	62.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613470 PE=4 SV=1	[more]
A0A067F1T9_CITSI	2.9e-83	60.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025212mg PE=4 SV=1	[more]
A0A061GTY3_THECC	2.3e-80	58.82	RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_040623 PE=4 S...	[more]
A0A0D2TL58_GOSRA	2.3e-80	59.12	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G072700 PE=4 SV=1	[more]

BLAST of CSPI04G13830 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63530.1	2.9e-42	35.85	RING/U-box superfamily protein	[more]
AT3G19910.1	9.9e-27	49.06	RING/U-box superfamily protein	[more]
AT5G52140.1	1.5e-22	47.62	RING/U-box superfamily protein	[more]
AT3G47180.1	2.5e-22	45.54	RING/U-box superfamily protein	[more]
AT5G24870.1	1.3e-18	48.00	RING/U-box superfamily protein	[more]

BLAST of CSPI04G13830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448944\|ref\|XP_004142225.1\|	9.9e-138	90.60	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis sativus]	[more]
gi\|700199013\|gb\|KGN54171.1\|	9.9e-138	90.60	hypothetical protein Csa_4G290860 [Cucumis sativus]	[more]
gi\|778693179\|ref\|XP_011653591.1\|	1.3e-132	88.72	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis sativus]	[more]
gi\|659097625\|ref\|XP_008449725.1\|	2.6e-130	86.52	PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X1 [Cucumis melo]	[more]
gi\|659097627\|ref\|XP_008449726.1\|	3.3e-125	84.64	PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination
GO:0046621	negative regulation of organ growth

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046621	negative regulation of organ growth
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0048437	floral organ development
biological_process	GO:0008285	negative regulation of cell proliferation
biological_process	GO:1900057	positive regulation of leaf senescence
biological_process	GO:0051865	protein autoubiquitination
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G13830.1	CSPI04G13830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 214..255 score: 7.2
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 215..255 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 215..255 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 211..259 score: 3.0
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..133 score: 6.4E-64coord: 158..262 score: 6.4
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 214..260 score: 9.89

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G13830	Cla008540	Watermelon (97103) v1	cpiwmB353
CSPI04G13830	Cla015236	Watermelon (97103) v1	cpiwmB289
CSPI04G13830	Csa4G290860	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G13830	MELO3C014603	Melon (DHL92) v3.5.1	cpimeB289
CSPI04G13830	MELO3C023546	Melon (DHL92) v3.5.1	cpimeB275
CSPI04G13830	ClCG02G023330	Watermelon (Charleston Gray)	cpiwcgB303
CSPI04G13830	Lsi10G010550	Bottle gourd (USVL1VR-Ls)	cpilsiB245
CSPI04G13830	Lsi02G025800	Bottle gourd (USVL1VR-Ls)	cpilsiB269
CSPI04G13830	MELO3C014603.2	Melon (DHL92) v3.6.1	cpimedB283
CSPI04G13830	MELO3C023546.2	Melon (DHL92) v3.6.1	cpimedB272
CSPI04G13830	CsaV3_4G024180	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G13830	CsaV3_7G031110	Cucumber (Chinese Long) v3	cpicucB251
CSPI04G13830	Cla97C02G049410	Watermelon (97103) v2	cpiwmbB294
CSPI04G13830	Bhi09G000526	Wax gourd	cpiwgoB420
CSPI04G13830	Bhi10G000248	Wax gourd	cpiwgoB394
CSPI04G13830	Cucsa.065490	Cucumber (Gy14) v1	cgycpiB055
CSPI04G13830	CmaCh20G000770	Cucurbita maxima (Rimu)	cmacpiB554
CSPI04G13830	Cp4.1LG05g05080	Cucurbita pepo (Zucchini)	cpecpiB730
CSPI04G13830	CsGy7G017660	Cucumber (Gy14) v2	cgybcpiB326
CSPI04G13830	Carg02717	Silver-seed gourd	carcpiB0958

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI04G13830	CSPI07G19300	Wild cucumber (PI 183967)	cpicpiB173

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G13830	Cucurbita maxima (Rimu)	cmacpiB612
CSPI04G13830	Cucurbita moschata (Rifu)	cmocpiB543
CSPI04G13830	Cucurbita moschata (Rifu)	cmocpiB603
CSPI04G13830	Cucurbita pepo (Zucchini)	cpecpiB282
CSPI04G13830	Cucumber (Gy14) v2	cgybcpiB170
CSPI04G13830	Silver-seed gourd	carcpiB0559