CSPI04G11360 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G11360
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ribonuclease 3-like protein 2
Location	Chr4 : 9622654 .. 9624560 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTATTACTAATTACTTTTTTCTCGCTTCTCCTCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGTTAAGGTCTTCAAATTAACCTTCACTTCTCCTTTGTTCCTAAAAATCTTCTTTTTTTTTTCTTTTTTTTTTTTTTGCCCTGTTTTAACTTCATGTCTGTATTTTTTTTATTGTTCAGGTTAAAGAGTTTGTTGATTCTGTTGACCTAGAAGGTAGCTCCGTTCCTTATGGTAGGTTGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGGTAAGTTCTTAGTTACATTTGAAGTATGACTATTGTTACTTTATTAGCTGGGCACCAATTAGTTTTCTTTTCGTCTTCAATCTTTTGTAGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGGTATATATTTTTATTGTATGATATTTGAGATGTTGCATACTTGCATTGTTTTGGACTCTGAATTAGGAGGTAGTTTTTATGTCGTAGTTGTCTCTTTTTCATTTAAAAGCATGCACCTTCACTTATATATTTGCTTTCTAACCAAGTAGGATGCTGAATTTTTCAGTAATTTATAATGAAATGCATTTTTTTTCTCTAAAGTCTGCCTGCTTCAATTGTAACCTTGTATCTTCATCGAACTATTTTCATTCTTTCTGTTCATTGTAAAAGTTGCAGCATTTTTTAAATTTAAGATTCATTTCACTGATCAATGCTCACTTATTTTAGAGAAATTAGTTTCAGCAACGACAGTGACCTTCTCAATTAATTTTAATGTTATTATATCTGTACACTTATTTGTTTAAAACTTATTTTCTTTTGAATCTCCACCCTCTGTGCATACCTTATCAACTAAAGGCCTGTTTCCCTTCCTTTTCCATCTTACACATTGATTTTTTATGTGAATAGAACTCTTCGATATCTGTGGGGATTATCTCGAGTCGTTTTGTGCGGGTCATAAACAAAAGATAAAACTCAGAGAGATCATTTACATACCATGAAGTTATTTGACTATCTTTTTCCCTTCTCCTTGTCCTCCTTTTTCAAACGTGTTCTAGTGCTAAATACTTTATGAATTTCTTACTTGCAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCAGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCCTCTCTAA

mRNA sequence

ATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTATTACTAATTACTTTTTTCTCGCTTCTCCTCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGTTAAGGTTAAAGAGTTTGTTGATTCTGTTGACCTAGAAGGTAGCTCCGTTCCTTATGGTAGGTTGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCAGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCCTCTCTAA

Coding sequence (CDS)

ATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTATTACTAATTACTTTTTTCTCGCTTCTCCTCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGTTAAGGTTAAAGAGTTTGTTGATTCTGTTGACCTAGAAGGTAGCTCCGTTCCTTATGGTAGGTTGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCAGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCCTCTCTAA

Homology

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BLAST of CSPI04G11360 vs. Swiss-Prot
Match: RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 8.3e-97
Identity = 188/333 (56.46%), Postives = 253/333 (75.98%), Query Frame = 1


Query: 4   SVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASPHL 63
           S+ A+E+IL+Y F+NKSLL+EA+TH S +   SYERLEF+GDSAIGLAI+NY +L  P L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGS-SVPYG 123
               LSLLRAANVSTEKLARV++ HGLY+++RR++P++D KVKEF ++V  E   SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 RLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQ 183
            L+KAPKVLAD+ ES+AGAVYVDVNFDLQ+LWVI RGLLEPI TL++LQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDT 243
           +C ++ K++DIK+WK+G+ SIA +Y+D + +ASG +  K+IARL AA+EAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 RIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI-A 303
                + ID      ++  AK KL+++C K+KW KP YSVE+D      + FVCS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TCYGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
           T   T Y+ GDE+S++K AE+S+A  MIRAL++
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRK 387

[Close]

BLAST of CSPI04G11360 vs. Swiss-Prot
Match: RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 1.8e-67
Identity = 142/277 (51.26%), Postives = 192/277 (69.31%), Query Frame = 1


Query: 8   LERILSYNFNNKSLLEEALTHPSYSASA-SYERLEFVGDSAIGLAITNYFFLASPHLHQG 67
           +ER+L Y F +  LLEEALTH S++  A SY+RLEFVGDSA+GLA +N+ +L +P L  G
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPG 99

Query: 68  HLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEG----SSVPY- 127
            LS LRAAN+STEKLARVAV H LY  +RR+ P +D+ V +F+++V  E     S+VPY 
Sbjct: 100 PLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYG 159

Query: 128 GRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 187
           G ++KAPKVLADIVE++A AVYVD  FDL+KLW + R L EPI T E   ++ QPVT+L 
Sbjct: 160 GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE--TIDEQPVTMLH 219

Query: 188 QVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMD 247
           ++CQ++GK    K W+ G  ++ +V+V G+ V  GSS QK IA+LNAAR+A  KL+ +  
Sbjct: 220 ELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKK 279

Query: 248 TRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKP 279
             + T V     DE  E+   KQKL++ CS++ W KP
Sbjct: 280 QVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKP 314

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BLAST of CSPI04G11360 vs. Swiss-Prot
Match: DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.6e-47
Identity = 122/338 (36.09%), Postives = 187/338 (55.33%), Query Frame = 1


Query: 8    LERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAITNYFFLASPHLHQ 67
            L+ +L   F NK LL EA+TH S  +S  + Y+RLEFVGD+ +   IT + F     L  
Sbjct: 1541 LKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPP 1600

Query: 68   GHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVPYGRL- 127
            G L+ LRAA V+ E  ARVAV H L+ ++R  S A++ +++EFV  V  E     +    
Sbjct: 1601 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFG 1660

Query: 128  ---MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 187
                KAPKVL DIVES+AGA+++D  +D   +W + + LL P+ T E L +   PV  L 
Sbjct: 1661 LGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM--HPVRELQ 1720

Query: 188  QVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMD 247
            + CQ+  + ++ K  + G+ +   V+VDG  +    + QK++A+  AAR AL+ L +  +
Sbjct: 1721 ERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEK-E 1780

Query: 248  TRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIA 307
            T  K     DG  ++      +Q L+D+C +R+W  P Y    + GP+H + FV SV++ 
Sbjct: 1781 TATKKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVN 1840

Query: 308  TC--YGTFYIVGDEKSRVKDAENSAASLMIRALQERKP 338
            T     T   +G+    VK A++SAA L++  L    P
Sbjct: 1841 TSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNRDFP 1875

[Close]

BLAST of CSPI04G11360 vs. Swiss-Prot
Match: DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 1.6e-47
Identity = 122/349 (34.96%), Postives = 190/349 (54.44%), Query Frame = 1


Query: 6    IALERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAITNYFFLASPHL 65
            + LER L Y F  K LL EA+TH S  +S  + Y+RLEFVGD+ +   IT + F     L
Sbjct: 1560 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1619

Query: 66   HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVPYGR 125
              G L+ LRAA V+ E  ARVAV H L+ Y+R  S A++ +++EFV  V  E S   +  
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679

Query: 126  L----MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 185
                  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1680 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1739

Query: 186  LFQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREAL--IKLS 245
            L + CQ+  + ++ K  ++G+ +   V++DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1740 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1799

Query: 246  DSMDTRIKTFVTIDGIDESFEIEG----------AKQKLHDVCSKRKWQKPNYSVEKDLG 305
            +  +++ K     +  ++  E E            +Q L+D+C ++ W  P+Y   K+ G
Sbjct: 1800 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1859

Query: 306  PSHERIFVCSVKIATC--YGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
            P+H + F   V++ T     T   +G+    VK A++SAA L++  L +
Sbjct: 1860 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]

BLAST of CSPI04G11360 vs. Swiss-Prot
Match: RTL3_ARATH (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.6e-44
Identity = 108/257 (42.02%), Postives = 168/257 (65.37%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           M+SSV A+E+IL+Y+F NK+LL+E LTH +   S  ++ L FVG+SA+ LA T + +L  
Sbjct: 411 MDSSVEAVEKILNYSFVNKTLLKELLTHNN---SPLFQGLMFVGESALSLAFTKHLYLTY 470

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           P L    LS+LR AN   +K A VAV  G+Y       P  +    +F++ +  E    P
Sbjct: 471 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDD--P 530

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVE-PQPVTV 180
           Y R++KAPK+L +++  VAGAVY+DV +++Q+L  I R LLEPIYTL++L+++  QP  +
Sbjct: 531 Y-RVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLM 590

Query: 181 LFQVCQRNGKQVDIKHWKNGSN--SIASVYVDGKFVASGSSMQKEIARLNAAREALIKLS 240
           LF++  ++GKQ+D ++ K+G +  +IA VY+D  F+ASG + + + A+L AA EA+ KLS
Sbjct: 591 LFRLADKHGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLS 650

Query: 241 DSMDTRIKTFVTIDGID 255
           + M   I+  +  D +D
Sbjct: 651 ECMP--IEKIIHQDNLD 659

[Close]

BLAST of CSPI04G11360 vs. TrEMBL
Match: A0A0A0L1E2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 9.0e-183
Identity = 331/338 (97.93%), Postives = 334/338 (98.82%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLA+TNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMD KVKEFVDSV LEGSSVP
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG +MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKPL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERK L
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of CSPI04G11360 vs. TrEMBL
Match: A0A067F3Y1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.6e-121
Identity = 219/334 (65.57%), Postives = 267/334 (79.94%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           ME +V  +E I++YNF NK LLEEALTH SY+ S SY+RLEF+GD+A+GLA++NY FLA 
Sbjct: 32  MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAY 91

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           P L  G LSLLRAAN+STEKLARVAV HG Y +VR  + A+D KVKEF ++V  E ++  
Sbjct: 92  PQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAV 151

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG  +KAPKVLADIVES+A A+YVD++FDLQKLW+I RGLLEPI TLEELQ +PQPVT+L
Sbjct: 152 YGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLL 211

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F++CQ+NGKQVDIKHW+    +IASVYVDG FVAS SS QKEIA+LNAAREAL KL+ SM
Sbjct: 212 FKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSM 271

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
                     D IDE FEIE AKQKLH++C K+KW KP+Y +EKD GPSH++ F+ +V+I
Sbjct: 272 PVNCDVCEIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQI 331

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
           AT  G  +I GDEKSRVKDAENSAAS+M+RAL+E
Sbjct: 332 ATTDGVLFITGDEKSRVKDAENSAASMMLRALRE 365

[Close]

BLAST of CSPI04G11360 vs. TrEMBL
Match: V4TYN2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008694mg PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 5.7e-121
Identity = 218/334 (65.27%), Postives = 267/334 (79.94%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           ME +V  +E I++YNF NK LLEEALTH SY+ S SY+RLEF+GD+A+GLA++NY FLA 
Sbjct: 32  MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAY 91

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           P L  G LSLLRAAN+STEKLARVAV HG Y +VR  + A+D KV+EF ++V  E ++  
Sbjct: 92  PQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVREFAEAVSQEDNTAV 151

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG  +KAPKVLADIVES+A A+YVD++FDLQKLW+I RGLLEPI TLEELQ +PQPVT+L
Sbjct: 152 YGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLL 211

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F++CQ+NGKQVDIKHW+    +IASVYVDG FVAS SS QKEIA+LNAAREAL KL+ SM
Sbjct: 212 FKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSM 271

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
                     D IDE FEIE AKQKLH++C K+KW KP+Y +EKD GPSH++ F+ +V+I
Sbjct: 272 PVNCDVCEIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQI 331

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
           AT  G  +I GDEKSRVKDAENSAAS+M+RAL+E
Sbjct: 332 ATTDGVLFITGDEKSRVKDAENSAASMMLRALRE 365

[Close]

BLAST of CSPI04G11360 vs. TrEMBL
Match: B9I149_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s08700g PE=4 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 2.2e-120
Identity = 221/337 (65.58%), Postives = 273/337 (81.01%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           ME+SV A+E+IL+Y F NK  LEEALTH SY+ SASY+R+EF+GD+A+GLA++NY +LA 
Sbjct: 1   MEASVFAVEKILNYKFKNKRHLEEALTHSSYTDSASYQRMEFLGDAALGLALSNYVYLAY 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGS--S 120
           P L  GHLSLLRAAN+STEKLARVA+ HGLY +VR ++ A+D KVKEF D+V  E    +
Sbjct: 61  PQLDPGHLSLLRAANISTEKLARVAIKHGLYRFVRHNATALDDKVKEFSDAVSGEDDDDA 120

Query: 121 VPYGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVT 180
           + YG  +KAPK+LADIVESVA AVYVDV+FDLQ  WVI RG+LEPI TLE+LQ +PQPVT
Sbjct: 121 LVYGGSIKAPKILADIVESVAAAVYVDVDFDLQTFWVIFRGILEPIVTLEDLQQQPQPVT 180

Query: 181 VLFQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSD 240
           +LF+ CQ+ GK VDIKHWKN + SIASVYVDG+F+AS SS QKEIA+LNAA+ AL+KLS+
Sbjct: 181 MLFERCQKQGKNVDIKHWKNEAKSIASVYVDGQFIASSSSEQKEIAKLNAAKGALLKLSN 240

Query: 241 SMDTRIKTFVTIDGID-ESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCS 300
           S  T +     +D  D  SFEIEGAKQKLH++C K+KW KPNY++E D+GP HE+ FVCS
Sbjct: 241 SFPTNLNNVSLLDIFDGSSFEIEGAKQKLHELCGKKKWPKPNYNIENDMGPPHEKKFVCS 300

Query: 301 VKIATCYGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
           V+IAT  G  Y+ GDE++RVKDAENSAAS MIRALQ+
Sbjct: 301 VQIATVDGILYVTGDERTRVKDAENSAASSMIRALQD 337

[Close]

BLAST of CSPI04G11360 vs. TrEMBL
Match: A0A061F5X1_THECC (Ribonuclease 3-like protein 2 OS=Theobroma cacao GN=TCM_030826 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 6.3e-120
Identity = 228/334 (68.26%), Postives = 265/334 (79.34%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           ME+S+ A+ERIL+Y+F NK LLEEALTH SYS S SY+RLEFVGD+A+GLA+TN+ FLA 
Sbjct: 43  MEASIAAVERILNYSFRNKRLLEEALTHSSYSDSTSYQRLEFVGDAALGLALTNHVFLAY 102

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           P L  G LSL+RAAN+STEKLARVA+ H L+ +VR ++ +++ KV+EF   V  E   V 
Sbjct: 103 PELDPGLLSLIRAANISTEKLARVAIKHRLFQFVRHNATSLEDKVREFAKVVSQEDDPVS 162

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG  MKAPKVLADIVESVA AVYVDVNFDL KLWVIIRGLLEPI TLE+LQ +PQPVTVL
Sbjct: 163 YGGSMKAPKVLADIVESVAAAVYVDVNFDLSKLWVIIRGLLEPIVTLEDLQQQPQPVTVL 222

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F+ CQ+ GK VDIKHWK G  ++ASVYVDG FVASGSS QK+IA+LNAAR AL KL  SM
Sbjct: 223 FEFCQKQGKHVDIKHWKKGLRNVASVYVDGSFVASGSSEQKDIAKLNAARGALHKLLQSM 282

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
              +  F  I GI+ SFEI+GAKQKLH++C K+KW KP Y +EKD G  HERIFV SVKI
Sbjct: 283 PVDVNPF-GIGGINGSFEIDGAKQKLHELCGKKKWPKPIYELEKDEGRPHERIFVSSVKI 342

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
            T  G  YI GDEKSRVK+AENSAAS MIRALQE
Sbjct: 343 PTVDGALYITGDEKSRVKEAENSAASFMIRALQE 375

[Close]

BLAST of CSPI04G11360 vs. TAIR10
Match: AT3G20420.1 (AT3G20420.1 RNAse THREE-like protein 2)

HSP 1 Score: 355.1 bits (910), Expect = 4.7e-98
Identity = 188/333 (56.46%), Postives = 253/333 (75.98%), Query Frame = 1


Query: 4   SVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASPHL 63
           S+ A+E+IL+Y F+NKSLL+EA+TH S +   SYERLEF+GDSAIGLAI+NY +L  P L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGS-SVPYG 123
               LSLLRAANVSTEKLARV++ HGLY+++RR++P++D KVKEF ++V  E   SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 RLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQ 183
            L+KAPKVLAD+ ES+AGAVYVDVNFDLQ+LWVI RGLLEPI TL++LQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDT 243
           +C ++ K++DIK+WK+G+ SIA +Y+D + +ASG +  K+IARL AA+EAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 RIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI-A 303
                + ID      ++  AK KL+++C K+KW KP YSVE+D      + FVCS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TCYGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
           T   T Y+ GDE+S++K AE+S+A  MIRAL++
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRK 387

[Close]

BLAST of CSPI04G11360 vs. TAIR10
Match: AT1G01040.2 (AT1G01040.2 dicer-like 1)

HSP 1 Score: 191.4 bits (485), Expect = 8.9e-49
Identity = 122/349 (34.96%), Postives = 190/349 (54.44%), Query Frame = 1


Query: 6    IALERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAITNYFFLASPHL 65
            + LER L Y F  K LL EA+TH S  +S  + Y+RLEFVGD+ +   IT + F     L
Sbjct: 1561 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1620

Query: 66   HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVPYGR 125
              G L+ LRAA V+ E  ARVAV H L+ Y+R  S A++ +++EFV  V  E S   +  
Sbjct: 1621 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1680

Query: 126  L----MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 185
                  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1681 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1740

Query: 186  LFQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREAL--IKLS 245
            L + CQ+  + ++ K  ++G+ +   V++DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1741 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1800

Query: 246  DSMDTRIKTFVTIDGIDESFEIEG----------AKQKLHDVCSKRKWQKPNYSVEKDLG 305
            +  +++ K     +  ++  E E            +Q L+D+C ++ W  P+Y   K+ G
Sbjct: 1801 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1860

Query: 306  PSHERIFVCSVKIATC--YGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
            P+H + F   V++ T     T   +G+    VK A++SAA L++  L +
Sbjct: 1861 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1907

[Close]

BLAST of CSPI04G11360 vs. TAIR10
Match: AT5G45150.1 (AT5G45150.1 RNAse THREE-like protein 3)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-45
Identity = 108/257 (42.02%), Postives = 168/257 (65.37%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           M+SSV A+E+IL+Y+F NK+LL+E LTH +   S  ++ L FVG+SA+ LA T + +L  
Sbjct: 411 MDSSVEAVEKILNYSFVNKTLLKELLTHNN---SPLFQGLMFVGESALSLAFTKHLYLTY 470

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           P L    LS+LR AN   +K A VAV  G+Y       P  +    +F++ +  E    P
Sbjct: 471 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDD--P 530

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVE-PQPVTV 180
           Y R++KAPK+L +++  VAGAVY+DV +++Q+L  I R LLEPIYTL++L+++  QP  +
Sbjct: 531 Y-RVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLM 590

Query: 181 LFQVCQRNGKQVDIKHWKNGSN--SIASVYVDGKFVASGSSMQKEIARLNAAREALIKLS 240
           LF++  ++GKQ+D ++ K+G +  +IA VY+D  F+ASG + + + A+L AA EA+ KLS
Sbjct: 591 LFRLADKHGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLS 650

Query: 241 DSMDTRIKTFVTIDGID 255
           + M   I+  +  D +D
Sbjct: 651 ECMP--IEKIIHQDNLD 659

[Close]

BLAST of CSPI04G11360 vs. TAIR10
Match: AT4G15417.1 (AT4G15417.1 RNAse II-like 1)

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-36
Identity = 97/231 (41.99%), Postives = 139/231 (60.17%), Query Frame = 1


Query: 7   ALERILSYNFNNKSLLEEALTHPSY--SASASYERLEFVGDSAIGLAITNYFFLASPHLH 66
           +LE+IL+Y F +KSLL +A T  SY    S SYE LE +GDS + + I   F    P   
Sbjct: 31  SLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLYPKEA 90

Query: 67  QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVPYGRL 126
            G L+ LRA NV TEKLARVAV H LY+Y+R   P ++ ++ EFV++  +E   +    L
Sbjct: 91  PGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEA--MEKYPLHSNGL 150

Query: 127 MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVC 186
           +K PKVLADIVES  GA+++D N   + +W +I+ LLEPI  L+++  +  P+T L ++C
Sbjct: 151 LKVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLDKM--KSHPMTELNEMC 210

Query: 187 Q-RNGKQVDIKHWKNGSNSIASVYVDGKFVASG-SSMQKEIARLNAAREAL 234
           Q RN K      W+   N     +++ KFV  G   ++KE AR  AA+ A+
Sbjct: 211 QKRNLKLTSKDTWE--ENQTYCFHIEDKFVGCGHHPVKKETARNFAAKNAI 254

[Close]

BLAST of CSPI04G11360 vs. TAIR10
Match: AT3G43920.2 (AT3G43920.2 dicer-like 3)

HSP 1 Score: 127.1 bits (318), Expect = 2.1e-29
Identity = 80/241 (33.20%), Postives = 132/241 (54.77%), Query Frame = 1


Query: 2    ESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASP 61
            E  +I LER + + F+ K LL+EA+TH S   S SYERLEF+GDS +   IT + F    
Sbjct: 1195 EDELIELERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYE 1254

Query: 62   HLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSV---DLEGSS 121
                G ++ LR+A V+ E  A+VAV + L+ +++R +  ++ ++ +++ S    D  G S
Sbjct: 1255 QTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRS 1314

Query: 122  VPYGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVT 181
            +P    ++ PK L D+VES+AGA+ +D   DL ++W +   LL P+ T ++LQ+   P  
Sbjct: 1315 IP---SIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQL--PPYR 1374

Query: 182  VLFQVCQRNGKQVDIKHWKNGSNSIASVYV---DGKFVASGSSMQKEIARLNAAREALIK 237
             L ++C   G    +K   +G  + A++ +   D      GS    ++A   AA   L +
Sbjct: 1375 ELNELCDSLGYFFRVKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQ 1430

[Close]

BLAST of CSPI04G11360 vs. NCBI nr
Match: gi|778697607|ref|XP_011654357.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus])

HSP 1 Score: 647.5 bits (1669), Expect = 1.3e-182
Identity = 331/338 (97.93%), Postives = 334/338 (98.82%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLA+TNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMD KVKEFVDSV LEGSSVP
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG +MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKPL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERK L
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of CSPI04G11360 vs. NCBI nr
Match: gi|700198793|gb|KGN53951.1| (hypothetical protein Csa_4G192230 [Cucumis sativus])

HSP 1 Score: 647.5 bits (1669), Expect = 1.3e-182
Identity = 331/338 (97.93%), Postives = 334/338 (98.82%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLA+TNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMD KVKEFVDSV LEGSSVP
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG +MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKPL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERK L
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of CSPI04G11360 vs. NCBI nr
Match: gi|659096529|ref|XP_008449146.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo])

HSP 1 Score: 578.9 bits (1491), Expect = 5.6e-162
Identity = 298/338 (88.17%), Postives = 311/338 (92.01%), Query Frame = 1


Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           M SSVIA+ERILSY F NK LLEEALTH SY  SASYERLEF+GDSAIGLA+TNYFFLA 
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVP 120
           P+LHQG LSLLRAANVSTEKLARVAVTHGLYNYVRR++  MD KVKEFVDSV LEGSSVP
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG LMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F VCQRNGKQVDIK+WKNGS +IASVYVDG FVASGSSMQKEIARLNAAREALIKLS SM
Sbjct: 181 FDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DT+IKT VTI+GIDESFEIEGAKQKLHD C ++KWQKP YS+EK LGPSH R FVCSVKI
Sbjct: 241 DTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKPL 339
            TCYGTFYIVGDEKSRVKDAENSAASLMIRALQERK L
Sbjct: 301 PTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of CSPI04G11360 vs. NCBI nr
Match: gi|659096531|ref|XP_008449147.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 459.5 bits (1181), Expect = 5.0e-126
Identity = 240/332 (72.29%), Postives = 275/332 (82.83%), Query Frame = 1


Query: 7   ALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASPHLHQG 66
           A+ER LSY F NK LLE ALTH SY  +ASY+RLEF+GDSAIGLAI+NYFF   P L QG
Sbjct: 3   AIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLDQG 62

Query: 67  HLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVPYGRLMK 126
            L+LLRAANVSTEKLARVAV HGLY+YVRR +  +D  V+EF D+V LE +S+PYG L K
Sbjct: 63  RLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGLKK 122

Query: 127 APKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQR 186
           APKVLADIVESVAGA+YVDV FDLQKLW II+ LL+PIYT E+L+ EPQPVT+LF+VCQ+
Sbjct: 123 APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVCQK 182

Query: 187 NGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKT 246
           NGKQV IK+ + GS ++A VYVD   VASGSS QK IARLNAAR+ALI LSDSMDT+IKT
Sbjct: 183 NGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKIKT 242

Query: 247 FVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIATCYGT 306
            VTIDGID SFEIEGA QKLHD CS++KWQ P+YSVE+ LG  HER FVCSVKI+T   T
Sbjct: 243 VVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYSVEEVLGRPHERRFVCSVKISTYDDT 302

Query: 307 FYIVGDEKSRVKDAENSAASLMIRALQERKPL 339
             I+GDEKSRVK+A+NSAASLMIR LQERK L
Sbjct: 303 HSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 334

[Close]

BLAST of CSPI04G11360 vs. NCBI nr
Match: gi|659096533|ref|XP_008449148.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 453.4 bits (1165), Expect = 3.6e-124
Identity = 239/332 (71.99%), Postives = 274/332 (82.53%), Query Frame = 1


Query: 7   ALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASPHLHQG 66
           A+ER LSY F NK LLE ALTH SY  +ASY+RLEF+GDSAIGLAI+NYFF   P L QG
Sbjct: 3   AIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLDQG 62

Query: 67  HLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVDLEGSSVPYGRLMK 126
            L+LLRAANVSTEKLARVAV HGLY+YVRR +  +D  V+EF D+V LE +S+PYG L K
Sbjct: 63  RLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGLKK 122

Query: 127 APKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQR 186
           APKVLADIVESVAGA+YVDV FDLQKLW II+ LL+PIYT E+L+ EPQPVT+LF+VCQ+
Sbjct: 123 APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVCQK 182

Query: 187 NGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKT 246
           NGKQV IK+ + GS ++A VYVD   VASGSS QK IARLNAAR+ALI LSDSMDT+IKT
Sbjct: 183 NGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKIKT 242

Query: 247 FVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIATCYGT 306
            VTIDGID SFEIEGA QKLHD CS++KWQ P+YS E+ LG  HER FVCSVKI+T   T
Sbjct: 243 VVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYS-EEVLGRPHERRFVCSVKISTYDDT 302

Query: 307 FYIVGDEKSRVKDAENSAASLMIRALQERKPL 339
             I+GDEKSRVK+A+NSAASLMIR LQERK L
Sbjct: 303 HSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 333

The following BLAST results are available for this feature:

BLAST of CSPI04G11360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTL2_ARATH	8.3e-97	56.46	Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1	[more]
RTL2_ORYSJ	1.8e-67	51.26	Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE...	[more]
DCL1_ORYSJ	1.6e-47	36.09	Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV...	[more]
DCL1_ARATH	1.6e-47	34.96	Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2	[more]
RTL3_ARATH	3.6e-44	42.02	Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2 SV=1	[more]

BLAST of CSPI04G11360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1E2_CUCSA	9.0e-183	97.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192230 PE=4 SV=1	[more]
A0A067F3Y1_CITSI	2.6e-121	65.57	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1	[more]
V4TYN2_9ROSI	5.7e-121	65.27	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008694mg PE=4 SV=1	[more]
B9I149_POPTR	2.2e-120	65.58	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s08700g PE=4 SV=2	[more]
A0A061F5X1_THECC	6.3e-120	68.26	Ribonuclease 3-like protein 2 OS=Theobroma cacao GN=TCM_030826 PE=4 SV=1	[more]

BLAST of CSPI04G11360 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20420.1	4.7e-98	56.46	RNAse THREE-like protein 2	[more]
AT1G01040.2	8.9e-49	34.96	dicer-like 1	[more]
AT5G45150.1	2.1e-45	42.02	RNAse THREE-like protein 3	[more]
AT4G15417.1	2.3e-36	41.99	RNAse II-like 1	[more]
AT3G43920.2	2.1e-29	33.20	dicer-like 3	[more]

BLAST of CSPI04G11360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778697607\|ref\|XP_011654357.1\|	1.3e-182	97.93	PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus]	[more]
gi\|700198793\|gb\|KGN53951.1\|	1.3e-182	97.93	hypothetical protein Csa_4G192230 [Cucumis sativus]	[more]
gi\|659096529\|ref\|XP_008449146.1\|	5.6e-162	88.17	PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo]	[more]
gi\|659096531\|ref\|XP_008449147.1\|	5.0e-126	72.29	PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo]	[more]
gi\|659096533\|ref\|XP_008449148.1\|	3.6e-124	71.99	PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000999	RNase_III_dom
IPR014720	dsRBD_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004525	ribonuclease III activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006396	RNA processing
biological_process	GO:0030422	production of siRNA involved in RNA interference
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016442	RISC complex
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G11360.1	CSPI04G11360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000999	Ribonuclease III domain	GENE3D	G3DSA:1.10.1520.10		coord: 5..166 score: 1.7
IPR000999	Ribonuclease III domain	PFAM	PF00636	Ribonuclease_3	coord: 38..145 score: 4.9
IPR000999	Ribonuclease III domain	SMART	SM00535	riboneu5	coord: 20..170 score: 1.3
IPR000999	Ribonuclease III domain	PROSITE	PS00517	RNASE_3_1	coord: 38..46 scor
IPR000999	Ribonuclease III domain	PROFILE	PS50142	RNASE_3_2	coord: 5..147 score: 33
IPR000999	Ribonuclease III domain	unknown	SSF69065	RNase III domain-like	coord: 127..166 score: 4.19E-39coord: 3..95 score: 4.19
IPR014720	Double-stranded RNA-binding domain	GENE3D	G3DSA:3.30.160.20		coord: 262..333 score: 3.5E-14coord: 176..236 score: 2.
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 176..236 score: 9.3E-6coord: 262..332 score: 4.1
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 262..333 score: 8.6E-11coord: 176..237 score: 0
IPR014720	Double-stranded RNA-binding domain	PROFILE	PS50137	DS_RBD	coord: 261..334 score: 10.63coord: 175..238 score: 9
None	No IPR available	PANTHER	PTHR14950	HELICASE-RELATED	coord: 3..257 score: 1.7E
None	No IPR available	PANTHER	PTHR14950:SF22	SUBFAMILY NOT NAMED	coord: 3..257 score: 1.7E
None	No IPR available	unknown	SSF54768	dsRNA-binding domain-like	coord: 129..236 score: 9.43E-9coord: 261..336 score: 2.83

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G11360	Csa4G192230	Cucumber (Chinese Long) v2	cpicuB183
CSPI04G11360	CsaV3_4G013380	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G11360	Cucsa.023960	Cucumber (Gy14) v1	cgycpiB513
CSPI04G11360	CsGy4G010900	Cucumber (Gy14) v2	cgybcpiB168

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G11360	Melon (DHL92) v3.6.1	cpimedB314
CSPI04G11360	Silver-seed gourd	carcpiB0314
CSPI04G11360	Silver-seed gourd	carcpiB0661
CSPI04G11360	Watermelon (97103) v2	cpiwmbB309
CSPI04G11360	Wax gourd	cpiwgoB408
CSPI04G11360	Cucurbita maxima (Rimu)	cmacpiB672
CSPI04G11360	Cucurbita maxima (Rimu)	cmacpiB877
CSPI04G11360	Cucurbita moschata (Rifu)	cmocpiB663
CSPI04G11360	Cucurbita moschata (Rifu)	cmocpiB857
CSPI04G11360	Melon (DHL92) v3.5.1	cpimeB323
CSPI04G11360	Watermelon (Charleston Gray)	cpiwcgB317
CSPI04G11360	Watermelon (97103) v1	cpiwmB346
CSPI04G11360	Cucurbita pepo (Zucchini)	cpecpiB076
CSPI04G11360	Cucurbita pepo (Zucchini)	cpecpiB498
CSPI04G11360	Bottle gourd (USVL1VR-Ls)	cpilsiB257