Csa4G192230 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G192230
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRibonuclease 3-like protein 2; contains IPR011907 (Ribonuclease III)
LocationChr4 : 9559584 .. 9561641 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCCTTTTTCTTTCCCTTCACTCCTCCATTCTTCTCACTCTCACCTTCCTCAACCATTCCTAAATCCATCCATCTCCTCTCATTATTGCTTCCACACCTTGTTTGATTTTCTACTTTCTTCTCTCTTGTATTTCCCTTTTAAACTTTCTTCTATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTGTTACTAATTACTTTTTTCTCGCTTCTCCCCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGATAAGGTCTTCAAATTAACCTTCACTTCTCCTTTGTTCCTAAAAATCTTCTTTTTTTTTTCTTTTTTTTTTTTGCCCTGTTTTAACTTCATGTCTGTATTTTTTTTATTGTTCAGGTTAAAGAGTTTGTTGATTCTGTTGCCCTAGAAGGTAGCTCCGTTCCTTATGGTGGGATGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGGTAAGTTCTTAGTTACATTTGAAGTATGACTATTGTTACTTTATTAGCTGGGCACCAATTAGTTTTCTTTTCGTCTTCAATCTTTTGTAGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCCATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCACGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGGTATATATTTTTATTGTATGATATTTGAGATGTTGCATACTTGCATTGTTTTGGACTCTGAATTAGGAGGTAGTTTTTATGTTGTAGTTGTCTCTTTTTCATTTAAAAGCATGCACCTTCACTTATATATTTGCTTTCTAACCAAGTAGGATGCTGAATTTTTCAGTAATTTATAATGAAATGCATTTTTTTTCTCTAAAGTCTGCCTGCTTCAATTGTAACCTTGTATCTTCATCGAACTATTTTCATTCTTTCTGTTCATTGTAAAAGTTGCAGCATTTTTTAAATTTAAGATTCATTTCACTGATCAATGCTCACTTATTTTAGAGAAATTAGTTTCAGCAACGACAGTGACCTTCTCAATTAATTTTAATGTTATTATATCTGTACACTTATTTGTTTAAAACTTATTTTCTTTTGAATCTCCACCCTCTGTGCATACCTTATCAACTAAAGGCCTGTTTCCCTTCCTTTTCCATCTTACACATTGATTTTTTATGTGAATAGAACTCTTCGATATCTGTGGGGATTATCTCGAGTCGTTTTGTGCGGGTCATAAACAAAAGATAAAACTCAGAGAGATCATTTACATACCATGAAGTTATTTGACTATCTTTTTCCCTTCTCCTTGTCCTCCTTTTTCAAACGTGTTCTAGTGCTAAATACTTTATGAATTTCTTACTTGCAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCGGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCATCTCTAA

mRNA sequence

ATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTGTTACTAATTACTTTTTTCTCGCTTCTCCCCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGATAAGGTTAAAGAGTTTGTTGATTCTGTTGCCCTAGAAGGTAGCTCCGTTCCTTATGGTGGGATGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCCATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCACGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCGGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCATCTCTAA

Coding sequence (CDS)

ATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTGTTACTAATTACTTTTTTCTCGCTTCTCCCCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGATAAGGTTAAAGAGTTTGTTGATTCTGTTGCCCTAGAAGGTAGCTCCGTTCCTTATGGTGGGATGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCCATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCACGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCGGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCATCTCTAA

Protein sequence

MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL*
Homology
[Close]
BLAST of Csa4G192230 vs. Swiss-Prot
Match: RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.4e-98
Identity = 187/337 (55.49%), Postives = 255/337 (75.67%), Query Frame = 1 

Query: 4   SVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHL 63
           S+ A+E+IL+Y F+NKSLL+EA+TH S +   SYERLEF+GDSAIGLA++NY +L  P L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGS-SVPYG 123
               LSLLRAANVSTEKLARV++ HGLY+++RR++P++D+KVKEF ++V  E   SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 GMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQ 183
           G++KAPKVLAD+ ES+AGAVYVDVNFDLQ+LWVI RGLLEPI TL++LQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDT 243
           +C ++ K++DIK+WK+G+ SIA +++D + +ASG +  K+IARL AA+EAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 RIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI-A 303
                + ID      ++  AK KL+++C K+KW KP YSVE+D      + FVCS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           T   T Y+ GDE+S++K AE+S+A  MIRAL++  +L
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]
BLAST of Csa4G192230 vs. Swiss-Prot
Match: RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 259.2 bits (661), Expect = 6.2e-68
Identity = 143/277 (51.62%), Postives = 189/277 (68.23%), Query Frame = 1 

Query: 8   LERILSYNFNNKSLLEEALTHPSYSASA-SYERLEFVGDSAIGLAVTNYFFLASPHLHQG 67
           +ER+L Y F +  LLEEALTH S++  A SY+RLEFVGDSA+GLA +N+ +L +P L  G
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPG 99

Query: 68  HLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEG----SSVPYG 127
            LS LRAAN+STEKLARVAV H LY  +RR+ P +D  V +F+++V  E     S+VPYG
Sbjct: 100 PLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYG 159

Query: 128 G-MMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 187
           G ++KAPKVLADIVE++A AVYVD  FDL+KLW + R L EPI T E   ++ QPVT+L 
Sbjct: 160 GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE--TIDEQPVTMLH 219

Query: 188 QVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMD 247
           ++CQ++GK    K W+ G  ++ +V V G+ V  GSS QK IA+LNAAR+A  KL+ +  
Sbjct: 220 ELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKK 279

Query: 248 TRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKP 279
             + T V     DE  E+   KQKL++ CS++ W KP
Sbjct: 280 QVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKP 314

[Close]
BLAST of Csa4G192230 vs. Swiss-Prot
Match: DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47
Identity = 122/349 (34.96%), Postives = 188/349 (53.87%), Query Frame = 1 

Query: 6    IALERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAVTNYFFLASPHL 65
            + LER L Y F  K LL EA+TH S  +S  + Y+RLEFVGD+ +   +T + F     L
Sbjct: 1560 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1619

Query: 66   HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYG- 125
              G L+ LRAA V+ E  ARVAV H L+ Y+R  S A++ +++EFV  V  E S   +  
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679

Query: 126  ---GMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 185
               G  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1680 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1739

Query: 186  LFQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREAL--IKLS 245
            L + CQ+  + ++ K  ++G+ +   V +DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1740 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1799

Query: 246  DSMDTRIKTFVTIDGIDESFEIEG----------AKQKLHDVCSKRKWQKPNYSVEKDLG 305
            +  +++ K     +  ++  E E            +Q L+D+C ++ W  P+Y   K+ G
Sbjct: 1800 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1859

Query: 306  PSHERIFVCSVKIATC--YGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
            P+H + F   V++ T     T   +G+    VK A++SAA L++  L +
Sbjct: 1860 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]
BLAST of Csa4G192230 vs. Swiss-Prot
Match: DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.5e-47
Identity = 122/333 (36.64%), Postives = 186/333 (55.86%), Query Frame = 1 

Query: 8    LERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAVTNYFFLASPHLHQ 67
            L+ +L   F NK LL EA+TH S  +S  + Y+RLEFVGD+ +   +T + F     L  
Sbjct: 1541 LKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPP 1600

Query: 68   GHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSV---ALEGSSVPYG 127
            G L+ LRAA V+ E  ARVAV H L+ ++R  S A++ +++EFV  V    L+     +G
Sbjct: 1601 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFG 1660

Query: 128  -GMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 187
             G  KAPKVL DIVES+AGA+++D  +D   +W + + LL P+ T E L +   PV  L 
Sbjct: 1661 LGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM--HPVRELQ 1720

Query: 188  QVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMD 247
            + CQ+  + ++ K  + G+ +   V VDG  +    + QK++A+  AAR AL+ L +  +
Sbjct: 1721 ERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEK-E 1780

Query: 248  TRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIA 307
            T  K     DG  ++      +Q L+D+C +R+W  P Y    + GP+H + FV SV++ 
Sbjct: 1781 TATKKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVN 1840

Query: 308  TC--YGTFYIVGDEKSRVKDAENSAASLMIRAL 333
            T     T   +G+    VK A++SAA L++  L
Sbjct: 1841 TSDRGWTDECIGEPMPSVKKAKDSAAVLLLELL 1870

[Close]
BLAST of Csa4G192230 vs. Swiss-Prot
Match: RTL3_ARATH (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-43
Identity = 106/257 (41.25%), Postives = 165/257 (64.20%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           M+SSV A+E+IL+Y+F NK+LL+E LTH +   S  ++ L FVG+SA+ LA T + +L  
Sbjct: 411 MDSSVEAVEKILNYSFVNKTLLKELLTHNN---SPLFQGLMFVGESALSLAFTKHLYLTY 470

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           P L    LS+LR AN   +K A VAV  G+Y       P  +    +F++ +  E    P
Sbjct: 471 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDD--P 530

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVE-PQPVTV 180
           Y  ++KAPK+L +++  VAGAVY+DV +++Q+L  I R LLEPIYTL++L+++  QP  +
Sbjct: 531 YR-VVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLM 590

Query: 181 LFQVCQRNGKQVDIKHWKNGSN--SIASVHVDGKFVASGSSMQKEIARLNAAREALIKLS 240
           LF++  ++GKQ+D ++ K+G +  +IA V++D  F+ASG + + + A+L AA EA+ KLS
Sbjct: 591 LFRLADKHGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLS 650

Query: 241 DSMDTRIKTFVTIDGID 255
           + M   I+  +  D +D
Sbjct: 651 ECMP--IEKIIHQDNLD 659


HSP 2 Score: 174.1 bits (440), Expect = 2.6e-42
Identity = 88/189 (46.56%), Postives = 130/189 (68.78%), Query Frame = 1 

Query: 3   SSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPH 62
           +SV A+E+IL+Y+F NK+LL+EA+T  S      ++RLEF GDS + +A TNY     P+
Sbjct: 2   NSVEAVEKILNYSFVNKTLLKEAITQKS----PLFDRLEFFGDSILEVAFTNYICHTYPN 61

Query: 63  LHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYG 122
           L    L  LR ANVS EK AR+AV H L++++   +P++  KVK F ++V  E   VPYG
Sbjct: 62  LKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYG 121

Query: 123 GMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQ-PVTVLF 182
           G++KAPK+LAD +ES+A  V++DVN+D+++LW I R LLEPIYT ++L ++P+ P   LF
Sbjct: 122 GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTLF 181

Query: 183 QVCQRNGKQ 191
           ++  ++G +
Sbjct: 182 RLADKHGSE 186


HSP 3 Score: 74.3 bits (181), Expect = 2.8e-12
Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = 1 

Query: 248 VTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVK--IATCYG 307
           + +D      E E  K KL ++C+K KW  P +SVE++ G  +E+  VCSVK  I    G
Sbjct: 824 MVVDKDSPHVEPEDEKGKLFEICAKNKWPNPIFSVEEERGQQNEQKIVCSVKIEIPNIEG 883

Query: 308 TFYIVGDEKSRVKDAENSAASLMIRALQ 334
           TF+I GD K   K+AENS+A  MIRAL+
Sbjct: 884 TFHIKGDAKPTKKEAENSSADHMIRALE 911


HSP 4 Score: 71.2 bits (173), Expect = 2.4e-11
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 1 

Query: 255 ESFEIE--GAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVK--IATCYGTFYIV 314
           +S  +E    + +L ++C+K KW +P +SV+++ GP +E  FVCSVK  I    GTF++ 
Sbjct: 299 DSLHVEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPNIEGTFHMK 358

Query: 315 GDEKSRVKDAENSAASLMIRALQ 334
           GD KS+ K AENS A  MIRAL+
Sbjct: 359 GDIKSKKKQAENSLAYHMIRALE 381

[Close]
BLAST of Csa4G192230 vs. TrEMBL
Match: A0A0A0L1E2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 664.8 bits (1714), Expect = 5.4e-188
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of Csa4G192230 vs. TrEMBL
Match: A0A067F3Y1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-123
Identity = 221/338 (65.38%), Postives = 272/338 (80.47%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           ME +V  +E I++YNF NK LLEEALTH SY+ S SY+RLEF+GD+A+GLA++NY FLA 
Sbjct: 32  MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAY 91

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           P L  G LSLLRAAN+STEKLARVAV HG Y +VR  + A+DDKVKEF ++V+ E ++  
Sbjct: 92  PQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAV 151

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YGG +KAPKVLADIVES+A A+YVD++FDLQKLW+I RGLLEPI TLEELQ +PQPVT+L
Sbjct: 152 YGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLL 211

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F++CQ+NGKQVDIKHW+    +IASV+VDG FVAS SS QKEIA+LNAAREAL KL+ SM
Sbjct: 212 FKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSM 271

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
                     D IDE FEIE AKQKLH++C K+KW KP+Y +EKD GPSH++ F+ +V+I
Sbjct: 272 PVNCDVCEIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQI 331

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           AT  G  +I GDEKSRVKDAENSAAS+M+RAL+E  +L
Sbjct: 332 ATTDGVLFITGDEKSRVKDAENSAASMMLRALRESTYL 369

[Close]
BLAST of Csa4G192230 vs. TrEMBL
Match: V4TYN2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008694mg PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 3.6e-123
Identity = 220/338 (65.09%), Postives = 272/338 (80.47%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           ME +V  +E I++YNF NK LLEEALTH SY+ S SY+RLEF+GD+A+GLA++NY FLA 
Sbjct: 32  MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAY 91

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           P L  G LSLLRAAN+STEKLARVAV HG Y +VR  + A+DDKV+EF ++V+ E ++  
Sbjct: 92  PQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVREFAEAVSQEDNTAV 151

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YGG +KAPKVLADIVES+A A+YVD++FDLQKLW+I RGLLEPI TLEELQ +PQPVT+L
Sbjct: 152 YGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLL 211

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F++CQ+NGKQVDIKHW+    +IASV+VDG FVAS SS QKEIA+LNAAREAL KL+ SM
Sbjct: 212 FKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSM 271

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
                     D IDE FEIE AKQKLH++C K+KW KP+Y +EKD GPSH++ F+ +V+I
Sbjct: 272 PVNCDVCEIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQI 331

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           AT  G  +I GDEKSRVKDAENSAAS+M+RAL+E  +L
Sbjct: 332 ATTDGVLFITGDEKSRVKDAENSAASMMLRALRESTYL 369

[Close]
BLAST of Csa4G192230 vs. TrEMBL
Match: B9I149_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s08700g PE=4 SV=2)

HSP 1 Score: 447.6 bits (1150), Expect = 1.4e-122
Identity = 223/341 (65.40%), Postives = 278/341 (81.52%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           ME+SV A+E+IL+Y F NK  LEEALTH SY+ SASY+R+EF+GD+A+GLA++NY +LA 
Sbjct: 1   MEASVFAVEKILNYKFKNKRHLEEALTHSSYTDSASYQRMEFLGDAALGLALSNYVYLAY 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGS--S 120
           P L  GHLSLLRAAN+STEKLARVA+ HGLY +VR ++ A+DDKVKEF D+V+ E    +
Sbjct: 61  PQLDPGHLSLLRAANISTEKLARVAIKHGLYRFVRHNATALDDKVKEFSDAVSGEDDDDA 120

Query: 121 VPYGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVT 180
           + YGG +KAPK+LADIVESVA AVYVDV+FDLQ  WVI RG+LEPI TLE+LQ +PQPVT
Sbjct: 121 LVYGGSIKAPKILADIVESVAAAVYVDVDFDLQTFWVIFRGILEPIVTLEDLQQQPQPVT 180

Query: 181 VLFQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSD 240
           +LF+ CQ+ GK VDIKHWKN + SIASV+VDG+F+AS SS QKEIA+LNAA+ AL+KLS+
Sbjct: 181 MLFERCQKQGKNVDIKHWKNEAKSIASVYVDGQFIASSSSEQKEIAKLNAAKGALLKLSN 240

Query: 241 SMDTRIKTFVTIDGID-ESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCS 300
           S  T +     +D  D  SFEIEGAKQKLH++C K+KW KPNY++E D+GP HE+ FVCS
Sbjct: 241 SFPTNLNNVSLLDIFDGSSFEIEGAKQKLHELCGKKKWPKPNYNIENDMGPPHEKKFVCS 300

Query: 301 VKIATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           V+IAT  G  Y+ GDE++RVKDAENSAAS MIRALQ+  +L
Sbjct: 301 VQIATVDGILYVTGDERTRVKDAENSAASSMIRALQDTDYL 341

[Close]
BLAST of Csa4G192230 vs. TrEMBL
Match: A0A061F5X1_THECC (Ribonuclease 3-like protein 2 OS=Theobroma cacao GN=TCM_030826 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.2e-122
Identity = 230/338 (68.05%), Postives = 270/338 (79.88%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           ME+S+ A+ERIL+Y+F NK LLEEALTH SYS S SY+RLEFVGD+A+GLA+TN+ FLA 
Sbjct: 43  MEASIAAVERILNYSFRNKRLLEEALTHSSYSDSTSYQRLEFVGDAALGLALTNHVFLAY 102

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           P L  G LSL+RAAN+STEKLARVA+ H L+ +VR ++ +++DKV+EF   V+ E   V 
Sbjct: 103 PELDPGLLSLIRAANISTEKLARVAIKHRLFQFVRHNATSLEDKVREFAKVVSQEDDPVS 162

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YGG MKAPKVLADIVESVA AVYVDVNFDL KLWVIIRGLLEPI TLE+LQ +PQPVTVL
Sbjct: 163 YGGSMKAPKVLADIVESVAAAVYVDVNFDLSKLWVIIRGLLEPIVTLEDLQQQPQPVTVL 222

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F+ CQ+ GK VDIKHWK G  ++ASV+VDG FVASGSS QK+IA+LNAAR AL KL  SM
Sbjct: 223 FEFCQKQGKHVDIKHWKKGLRNVASVYVDGSFVASGSSEQKDIAKLNAARGALHKLLQSM 282

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
              +  F  I GI+ SFEI+GAKQKLH++C K+KW KP Y +EKD G  HERIFV SVKI
Sbjct: 283 PVDVNPF-GIGGINGSFEIDGAKQKLHELCGKKKWPKPIYELEKDEGRPHERIFVSSVKI 342

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
            T  G  YI GDEKSRVK+AENSAAS MIRALQE  +L
Sbjct: 343 PTVDGALYITGDEKSRVKEAENSAASFMIRALQESGYL 379

[Close]
BLAST of Csa4G192230 vs. TAIR10
Match: AT3G20420.1 (AT3G20420.1 RNAse THREE-like protein 2)

HSP 1 Score: 359.4 bits (921), Expect = 2.5e-99
Identity = 187/337 (55.49%), Postives = 255/337 (75.67%), Query Frame = 1 

Query: 4   SVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHL 63
           S+ A+E+IL+Y F+NKSLL+EA+TH S +   SYERLEF+GDSAIGLA++NY +L  P L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGS-SVPYG 123
               LSLLRAANVSTEKLARV++ HGLY+++RR++P++D+KVKEF ++V  E   SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 GMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQ 183
           G++KAPKVLAD+ ES+AGAVYVDVNFDLQ+LWVI RGLLEPI TL++LQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDT 243
           +C ++ K++DIK+WK+G+ SIA +++D + +ASG +  K+IARL AA+EAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 RIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI-A 303
                + ID      ++  AK KL+++C K+KW KP YSVE+D      + FVCS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           T   T Y+ GDE+S++K AE+S+A  MIRAL++  +L
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]
BLAST of Csa4G192230 vs. TAIR10
Match: AT1G01040.2 (AT1G01040.2 dicer-like 1)

HSP 1 Score: 191.8 bits (486), Expect = 6.8e-49
Identity = 122/349 (34.96%), Postives = 188/349 (53.87%), Query Frame = 1 

Query: 6    IALERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAVTNYFFLASPHL 65
            + LER L Y F  K LL EA+TH S  +S  + Y+RLEFVGD+ +   +T + F     L
Sbjct: 1561 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1620

Query: 66   HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYG- 125
              G L+ LRAA V+ E  ARVAV H L+ Y+R  S A++ +++EFV  V  E S   +  
Sbjct: 1621 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1680

Query: 126  ---GMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 185
               G  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1681 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1740

Query: 186  LFQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREAL--IKLS 245
            L + CQ+  + ++ K  ++G+ +   V +DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1741 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1800

Query: 246  DSMDTRIKTFVTIDGIDESFEIEG----------AKQKLHDVCSKRKWQKPNYSVEKDLG 305
            +  +++ K     +  ++  E E            +Q L+D+C ++ W  P+Y   K+ G
Sbjct: 1801 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1860

Query: 306  PSHERIFVCSVKIATC--YGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
            P+H + F   V++ T     T   +G+    VK A++SAA L++  L +
Sbjct: 1861 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1907

[Close]
BLAST of Csa4G192230 vs. TAIR10
Match: AT5G45150.1 (AT5G45150.1 RNAse THREE-like protein 3)

HSP 1 Score: 178.3 bits (451), Expect = 7.8e-45
Identity = 106/257 (41.25%), Postives = 165/257 (64.20%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           M+SSV A+E+IL+Y+F NK+LL+E LTH +   S  ++ L FVG+SA+ LA T + +L  
Sbjct: 411 MDSSVEAVEKILNYSFVNKTLLKELLTHNN---SPLFQGLMFVGESALSLAFTKHLYLTY 470

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           P L    LS+LR AN   +K A VAV  G+Y       P  +    +F++ +  E    P
Sbjct: 471 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDD--P 530

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVE-PQPVTV 180
           Y  ++KAPK+L +++  VAGAVY+DV +++Q+L  I R LLEPIYTL++L+++  QP  +
Sbjct: 531 YR-VVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLM 590

Query: 181 LFQVCQRNGKQVDIKHWKNGSN--SIASVHVDGKFVASGSSMQKEIARLNAAREALIKLS 240
           LF++  ++GKQ+D ++ K+G +  +IA V++D  F+ASG + + + A+L AA EA+ KLS
Sbjct: 591 LFRLADKHGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLS 650

Query: 241 DSMDTRIKTFVTIDGID 255
           + M   I+  +  D +D
Sbjct: 651 ECMP--IEKIIHQDNLD 659


HSP 2 Score: 174.1 bits (440), Expect = 1.5e-43
Identity = 88/189 (46.56%), Postives = 130/189 (68.78%), Query Frame = 1 

Query: 3   SSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPH 62
           +SV A+E+IL+Y+F NK+LL+EA+T  S      ++RLEF GDS + +A TNY     P+
Sbjct: 2   NSVEAVEKILNYSFVNKTLLKEAITQKS----PLFDRLEFFGDSILEVAFTNYICHTYPN 61

Query: 63  LHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYG 122
           L    L  LR ANVS EK AR+AV H L++++   +P++  KVK F ++V  E   VPYG
Sbjct: 62  LKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYG 121

Query: 123 GMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQ-PVTVLF 182
           G++KAPK+LAD +ES+A  V++DVN+D+++LW I R LLEPIYT ++L ++P+ P   LF
Sbjct: 122 GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTLF 181

Query: 183 QVCQRNGKQ 191
           ++  ++G +
Sbjct: 182 RLADKHGSE 186


HSP 3 Score: 74.3 bits (181), Expect = 1.6e-13
Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = 1 

Query: 248 VTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVK--IATCYG 307
           + +D      E E  K KL ++C+K KW  P +SVE++ G  +E+  VCSVK  I    G
Sbjct: 824 MVVDKDSPHVEPEDEKGKLFEICAKNKWPNPIFSVEEERGQQNEQKIVCSVKIEIPNIEG 883

Query: 308 TFYIVGDEKSRVKDAENSAASLMIRALQ 334
           TF+I GD K   K+AENS+A  MIRAL+
Sbjct: 884 TFHIKGDAKPTKKEAENSSADHMIRALE 911


HSP 4 Score: 71.2 bits (173), Expect = 1.3e-12
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 1 

Query: 255 ESFEIE--GAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVK--IATCYGTFYIV 314
           +S  +E    + +L ++C+K KW +P +SV+++ GP +E  FVCSVK  I    GTF++ 
Sbjct: 299 DSLHVEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPNIEGTFHMK 358

Query: 315 GDEKSRVKDAENSAASLMIRALQ 334
           GD KS+ K AENS A  MIRAL+
Sbjct: 359 GDIKSKKKQAENSLAYHMIRALE 381

[Close]
BLAST of Csa4G192230 vs. TAIR10
Match: AT4G15417.1 (AT4G15417.1 RNAse II-like 1)

HSP 1 Score: 158.3 bits (399), Expect = 8.4e-39
Identity = 98/231 (42.42%), Postives = 139/231 (60.17%), Query Frame = 1 

Query: 7   ALERILSYNFNNKSLLEEALTHPSY--SASASYERLEFVGDSAIGLAVTNYFFLASPHLH 66
           +LE+IL+Y F +KSLL +A T  SY    S SYE LE +GDS + + +   F    P   
Sbjct: 31  SLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLYPKEA 90

Query: 67  QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGM 126
            G L+ LRA NV TEKLARVAV H LY+Y+R   P +++++ EFV+  A+E   +   G+
Sbjct: 91  PGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVE--AMEKYPLHSNGL 150

Query: 127 MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVC 186
           +K PKVLADIVES  GA+++D N   + +W +I+ LLEPI  L+++  +  P+T L ++C
Sbjct: 151 LKVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLDKM--KSHPMTELNEMC 210

Query: 187 Q-RNGKQVDIKHWKNGSNSIASVHVDGKFVASG-SSMQKEIARLNAAREAL 234
           Q RN K      W+   N     H++ KFV  G   ++KE AR  AA+ A+
Sbjct: 211 QKRNLKLTSKDTWE--ENQTYCFHIEDKFVGCGHHPVKKETARNFAAKNAI 254

[Close]
BLAST of Csa4G192230 vs. TAIR10
Match: AT3G43920.2 (AT3G43920.2 dicer-like 3)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 78/241 (32.37%), Postives = 129/241 (53.53%), Query Frame = 1 

Query: 2    ESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASP 61
            E  +I LER + + F+ K LL+EA+TH S   S SYERLEF+GDS +   +T + F    
Sbjct: 1195 EDELIELERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYE 1254

Query: 62   HLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVAL---EGSS 121
                G ++ LR+A V+ E  A+VAV + L+ +++R +  ++ ++ +++ S       G S
Sbjct: 1255 QTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRS 1314

Query: 122  VPYGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVT 181
            +P    ++ PK L D+VES+AGA+ +D   DL ++W +   LL P+ T ++LQ+   P  
Sbjct: 1315 IP---SIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQL--PPYR 1374

Query: 182  VLFQVCQRNGKQVDIKHWKNGSNSIASVHV---DGKFVASGSSMQKEIARLNAAREALIK 237
             L ++C   G    +K   +G  + A++ +   D      GS    ++A   AA   L +
Sbjct: 1375 ELNELCDSLGYFFRVKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQ 1430

[Close]
BLAST of Csa4G192230 vs. NCBI nr
Match: gi|778697607|ref|XP_011654357.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus])

HSP 1 Score: 664.8 bits (1714), Expect = 7.8e-188
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of Csa4G192230 vs. NCBI nr
Match: gi|778697607|ref|XP_011654357.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 2.5e-101
Identity = 190/280 (67.86%), Postives = 229/280 (81.79%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           + +S+  +ERILSY F NK LLEEALTH SY  S SY+RLEF+GDSAIGLA++ YFF   
Sbjct: 376 LRNSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLY 435

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           P L+QG L+LLRAANVSTEKLARVAV H LY+YVRR++  +DD V+EF D+VALE +S+P
Sbjct: 436 PDLNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIP 495

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           Y G++KAPKVLADIVESVAGA+YVDV FDLQKLW II+  L+PIYT E+L+ +PQPVT+L
Sbjct: 496 YVGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLL 555

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F+ CQ+ GKQV I++ + GS  +A V+VD + VASG S QK IARLNAAREALI LSDS 
Sbjct: 556 FEDCQKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDST 615

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNY 281
           DT+IK  VTIDGID SFEIEGAKQKLHD C ++KWQ P+Y
Sbjct: 616 DTKIKRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 655


HSP 2 Score: 664.8 bits (1714), Expect = 7.8e-188
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of Csa4G192230 vs. NCBI nr
Match: gi|659096529|ref|XP_008449146.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo])

HSP 1 Score: 585.1 bits (1507), Expect = 7.8e-164
Identity = 299/338 (88.46%), Postives = 314/338 (92.90%), Query Frame = 1 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
           M SSVIA+ERILSY F NK LLEEALTH SY  SASYERLEF+GDSAIGLA+TNYFFLA 
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120
           P+LHQG LSLLRAANVSTEKLARVAVTHGLYNYVRR++  MD KVKEFVDSVALEGSSVP
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVP 120

Query: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YGG+MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F VCQRNGKQVDIK+WKNGS +IASV+VDG FVASGSSMQKEIARLNAAREALIKLS SM
Sbjct: 181 FDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DT+IKT VTI+GIDESFEIEGAKQKLHD C ++KWQKP YS+EK LGPSH R FVCSVKI
Sbjct: 241 DTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
            TCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 PTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of Csa4G192230 vs. NCBI nr
Match: gi|659096531|ref|XP_008449147.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 468.0 bits (1203), Expect = 1.4e-128
Identity = 240/332 (72.29%), Postives = 279/332 (84.04%), Query Frame = 1 

Query: 7   ALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQG 66
           A+ER LSY F NK LLE ALTH SY  +ASY+RLEF+GDSAIGLA++NYFF   P L QG
Sbjct: 3   AIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLDQG 62

Query: 67  HLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGMMK 126
            L+LLRAANVSTEKLARVAV HGLY+YVRR +  +DD V+EF D+VALE +S+PYGG+ K
Sbjct: 63  RLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGLKK 122

Query: 127 APKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQR 186
           APKVLADIVESVAGA+YVDV FDLQKLW II+ LL+PIYT E+L+ EPQPVT+LF+VCQ+
Sbjct: 123 APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVCQK 182

Query: 187 NGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKT 246
           NGKQV IK+ + GS ++A V+VD   VASGSS QK IARLNAAR+ALI LSDSMDT+IKT
Sbjct: 183 NGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKIKT 242

Query: 247 FVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIATCYGT 306
            VTIDGID SFEIEGA QKLHD CS++KWQ P+YSVE+ LG  HER FVCSVKI+T   T
Sbjct: 243 VVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYSVEEVLGRPHERRFVCSVKISTYDDT 302

Query: 307 FYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
             I+GDEKSRVK+A+NSAASLMIR LQERK+L
Sbjct: 303 HSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 334

[Close]
BLAST of Csa4G192230 vs. NCBI nr
Match: gi|659096533|ref|XP_008449148.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 461.8 bits (1187), Expect = 1.0e-126
Identity = 239/332 (71.99%), Postives = 278/332 (83.73%), Query Frame = 1 

Query: 7   ALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQG 66
           A+ER LSY F NK LLE ALTH SY  +ASY+RLEF+GDSAIGLA++NYFF   P L QG
Sbjct: 3   AIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLDQG 62

Query: 67  HLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGMMK 126
            L+LLRAANVSTEKLARVAV HGLY+YVRR +  +DD V+EF D+VALE +S+PYGG+ K
Sbjct: 63  RLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGLKK 122

Query: 127 APKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQR 186
           APKVLADIVESVAGA+YVDV FDLQKLW II+ LL+PIYT E+L+ EPQPVT+LF+VCQ+
Sbjct: 123 APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVCQK 182

Query: 187 NGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKT 246
           NGKQV IK+ + GS ++A V+VD   VASGSS QK IARLNAAR+ALI LSDSMDT+IKT
Sbjct: 183 NGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKIKT 242

Query: 247 FVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIATCYGT 306
            VTIDGID SFEIEGA QKLHD CS++KWQ P+YS E+ LG  HER FVCSVKI+T   T
Sbjct: 243 VVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYS-EEVLGRPHERRFVCSVKISTYDDT 302

Query: 307 FYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
             I+GDEKSRVK+A+NSAASLMIR LQERK+L
Sbjct: 303 HSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 333

The following BLAST results are available for this feature:
BLAST of Csa4G192230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTL2_ARATH4.4e-9855.49Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1[more]
RTL2_ORYSJ6.2e-6851.62Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE... [more]
DCL1_ARATH1.2e-4734.96Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2[more]
DCL1_ORYSJ3.5e-4736.64Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV... [more]
RTL3_ARATH1.4e-4341.25Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2 SV=1[more]
BLAST of Csa4G192230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1E2_CUCSA5.4e-188100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192230 PE=4 SV=1[more]
A0A067F3Y1_CITSI1.6e-12365.38Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1[more]
V4TYN2_9ROSI3.6e-12365.09Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008694mg PE=4 SV=1[more]
B9I149_POPTR1.4e-12265.40Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s08700g PE=4 SV=2[more]
A0A061F5X1_THECC5.2e-12268.05Ribonuclease 3-like protein 2 OS=Theobroma cacao GN=TCM_030826 PE=4 SV=1[more]
BLAST of Csa4G192230 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20420.12.5e-9955.49 RNAse THREE-like protein 2[more]
AT1G01040.26.8e-4934.96 dicer-like 1[more]
AT5G45150.17.8e-4541.25 RNAse THREE-like protein 3[more]
AT4G15417.18.4e-3942.42 RNAse II-like 1[more]
AT3G43920.21.6e-2932.37 dicer-like 3[more]
BLAST of Csa4G192230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778697607|ref|XP_011654357.1|7.8e-188100.00PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus][more]
gi|778697607|ref|XP_011654357.1|2.5e-10167.86PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus][more]
gi|659096529|ref|XP_008449146.1|7.8e-16488.46PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo][more]
gi|659096531|ref|XP_008449147.1|1.4e-12872.29PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo][more]
gi|659096533|ref|XP_008449148.1|1.0e-12671.99PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR014720dsRBD_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0006396 RNA processing
biological_process GO:0030422 production of siRNA involved in RNA interference
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0016442 RISC complex
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU084823cucumber EST collection version 3.0transcribed_cluster
CU123756cucumber EST collection version 3.0transcribed_cluster
CU159422cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G192230.1Csa4G192230.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU159422CU159422transcribed_cluster
CU123756CU123756transcribed_cluster
CU084823CU084823transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainGENE3DG3DSA:1.10.1520.10coord: 5..166
score: 1.6
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 38..145
score: 6.6
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 20..170
score: 1.0
IPR000999Ribonuclease III domainPROSITEPS00517RNASE_3_1coord: 38..46
scor
IPR000999Ribonuclease III domainPROFILEPS50142RNASE_3_2coord: 5..147
score: 34
IPR000999Ribonuclease III domainunknownSSF69065RNase III domain-likecoord: 3..166
score: 3.49
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 262..333
score: 3.5E-14coord: 176..237
score: 3.
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 262..332
score: 4.1E-12coord: 176..236
score: 5.
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 262..333
score: 8.6E-11coord: 176..237
score: 0
IPR014720Double-stranded RNA-binding domainPROFILEPS50137DS_RBDcoord: 261..334
score: 10.63coord: 175..238
score: 9
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 3..257
score: 1.6E
NoneNo IPR availablePANTHERPTHR14950:SF22SUBFAMILY NOT NAMEDcoord: 3..257
score: 1.6E
NoneNo IPR availableunknownSSF54768dsRNA-binding domain-likecoord: 261..335
score: 3.46E-13coord: 129..236
score: 8.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G192230CSPI04G11360Wild cucumber (PI 183967)cpicuB183
Csa4G192230Cucsa.023960Cucumber (Gy14) v1cgycuB487
Csa4G192230CsGy4G010900Cucumber (Gy14) v2cgybcuB168
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G192230Watermelon (97103) v2cuwmbB299
Csa4G192230Wax gourdcuwgoB406
Csa4G192230Cucurbita maxima (Rimu)cmacuB664
Csa4G192230Cucurbita maxima (Rimu)cmacuB860
Csa4G192230Cucurbita moschata (Rifu)cmocuB652
Csa4G192230Cucurbita moschata (Rifu)cmocuB848
Csa4G192230Melon (DHL92) v3.5.1cumeB324
Csa4G192230Watermelon (Charleston Gray)cuwcgB302
Csa4G192230Watermelon (97103) v1cuwmB339
Csa4G192230Cucurbita pepo (Zucchini)cpecuB079
Csa4G192230Cucurbita pepo (Zucchini)cpecuB497
Csa4G192230Bottle gourd (USVL1VR-Ls)culsiB258
Csa4G192230Melon (DHL92) v3.6.1cumedB311
Csa4G192230Silver-seed gourdcarcuB0310
Csa4G192230Silver-seed gourdcarcuB0651