CsaV3_4G013380 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G013380
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRibonuclease 3-like protein
Locationchr4 : 9712507 .. 9715548 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATAGAAGAGTATAAGATGGCTGGTGAGAGATGGTATTGTGTAGGTGTGTGACTAATTAATCACTAACTTTTGTTGTATGTGTAAAAGAAAAAGCACATAAATAAACTATAAAAGAAAAAGATATATGGTATAGATTAATAAAAGATTTAAAAATGGTAGGAAAGAAAGGGACGGGATGGGCTTCAACGGGGTTCCCAAATATGGTCTACACTTTCCTTTTCTCCCAATTTCCCTCTACGTAAACCCTAGAAAAACCCTTTTTCTTTCCCTTCACTCCTCCATTCTTCTCACTCTCACCTTCCTCAACCATTCCTAAATCCATCCATCTCCTCTCATTATTGCTTCCACACCTTGTTTGATTTTCTACTTTCTTCTATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTATTACTAATTACTTTTTTCTCGCTTCTCCTCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGTTAAGGTCTTCAAATTAACCTTCACTTCTCCTTTGTTCCTAAAAATCTTCTTTTTTTTTTCTTTTTTTTTTTGCCCTGTTTTAACTTCATGTCTGTATTTTTTTTATTGTTCAGGTTAAAGAGTTTGTTGATTCTGTTGCCCTAGAAGGTAGCTCCGTTCATTATGGTAGGTTGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGGTAAGTTCTTAGTTACATTTGAAGTATGACTATTGTTACTTTATTAGCTGGGCACCAATTAGTTTTCTTTTCGTCTTCAATCTTTTGTAGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGGTATATATTTTTATTGTATGATATTTGAGATGTTGCATACTTGCATTGTTTTGGACTCTGAATTAGGAGGTAGTTTTTATGTTGTAGTTGTCTCTTTTTCATTTAAAAGCATGCACCTTCACTTATATATTTGCTTTCTAACCAAGTAGGATGCTGAATTTTTCAGTAATTTATAATGAAATGCATTTTTTTTCTCTAAAGTCTGCCTGCTTCAATTGTAACCTTGTATCTTCATCGAACTATTTTCATTCTTTCTGTTCATTGTAAAAGTTGCAGCATTTTTTAAATTTAAGATTCATTTCACTGATCAATGCTCACTTATTTTAGAGAAATTAGTTTCAGCAACGACAGTGACCTTCTCAATTAATTTTAATGTTATTATATCTGTACACTTATTTGTTTAAAACTTATTTTCTTTTGAATCTCCACCCTCTGTGCATACCTTATCAACTAAAGGCCTGTTTCCCTTCCTTTTCCATCTTACACATTGATTTTTTATGTGAATAGAACTCTTCGATATCTGTGGGGATTATCTCGAGTCGTTTTGTGCGGGTCATAAACAAAAGATAAAACTCAGAGAGATCATTTACATACCATGAAGTTATTTGACTATCTTTTTCCCTTCTCCTTGTCCTCCTTTTTCAAACGTGTTCTAGTGCTAAATACTTTATGAATTTCTTACTTGCAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCGGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCATCTCTAATGCATATATATTTATTCAATTTGGGTTGAATCTAACATAAGTACAGTGAGTTTATGCTTCCTGATGCCCTCATTTTCCTTAGATATCATGGAGGTAGGTATGTTGTAAATCATGATTCTACTTGCCTTTCCTAGTGAAGTTATGGTATCTAAATGATAATTTTTTGCTATGTAAAGTTCAAACCAACCGGTTTAGGTTGTCAAGATCTGTAAATATTATCTATCTGTTTTTATATTTAGTGCATGTTTGTGTGATTCTACCTAATAGAATAACACTTAAAATACCCCAACAATGGCTAAACAAAGACAGTACTATGATGATCCTTAATTTATATATAAGCCAAAAAATGATTACAACAGTCACAATATAACAATAATAAAGAAAACATATCAGAACACATACCAGCCTTCTAATATCAAGCTTGGAGACCCTTTTCGGCTACAGCAACCTTTACACCACAAAGAAGAAAAGAAATAACCTAGCTACCCTATCCCTAACTATATATATTTATAGCCCCTCCTATCTTTCATCCCAGTTGGATCGTGCATGTGTGAATAATTGGGGACCTTACAATTTGTTGGAAACAATTTTAGAATTTAGGGGCATTGTGGATGGTTGTAATTTATAGTCTCAAATTGAAAAGTTTACTATAGTTTTATATCTTGTATGCATTGGTCTTCCATGGTTTATCCCAATGGTTTATCCAACTTTAGTGTTAACAGTTTGGAACTTTTGATTTTTAACCAACTTTAAGTATTTTG

mRNA sequence

ATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTATTACTAATTACTTTTTTCTCGCTTCTCCTCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGTTAAGGTTAAAGAGTTTGTTGATTCTGTTGCCCTAGAAGGTAGCTCCGTTCATTATGGTAGGTTGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCGGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCATCTCTAA

Coding sequence (CDS)

ATGGAATCCTCCGTCATTGCCCTTGAGCGCATTCTTTCCTATAACTTTAACAACAAGAGTCTCTTAGAAGAAGCCCTCACTCACCCCTCTTACTCTGCCTCTGCCTCCTATGAGCGTCTTGAGTTTGTCGGCGATTCAGCTATTGGCCTTGCTATTACTAATTACTTTTTTCTCGCTTCTCCTCACCTCCATCAAGGCCATCTCTCTTTACTTAGAGCTGCTAATGTTAGCACTGAGAAGCTTGCTCGTGTTGCAGTCACCCATGGATTGTATAACTATGTTAGGCGCGATTCACCTGCTATGGATGTTAAGGTTAAAGAGTTTGTTGATTCTGTTGCCCTAGAAGGTAGCTCCGTTCATTATGGTAGGTTGATGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCAGTGGCTGGTGCTGTCTATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAGCAGAAGCTACATGATGTTTGTTCCAAGAGAAAGTGGCAGAAACCAAATTACAGTGTGGAGAAAGATCTAGGACCTTCACATGAAAGGATATTTGTTTGCTCGGTTAAAATTGCCACTTGTTATGGTACGTTCTATATTGTGGGAGATGAGAAATCAAGAGTAAAAGATGCAGAGAACTCGGCAGCCTCATTGATGATTCGTGCTTTACAGGAAAGAAAGCATCTCTAA

Protein sequence

MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASPHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHYGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Homology
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BLAST of CsaV3_4G013380 vs. NCBI nr
Match: KGN53951.1 (hypothetical protein Csa_4G192230 [Cucumis sativus])

HSP 1 Score: 650.2 bits (1676), Expect = 3.9e-183
Identity = 332/338 (98.22%), Postives = 335/338 (99.11%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLA+TNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMD KVKEFVDSVALEGSSV 
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG +MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of CsaV3_4G013380 vs. NCBI nr
Match: XP_011654357.1 (PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus])

HSP 1 Score: 650.2 bits (1676), Expect = 3.9e-183
Identity = 332/338 (98.22%), Postives = 335/338 (99.11%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLA+TNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMD KVKEFVDSVALEGSSV 
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG +MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of CsaV3_4G013380 vs. NCBI nr
Match: XP_008449146.1 (PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo])

HSP 1 Score: 581.6 bits (1498), Expect = 1.7e-162
Identity = 299/338 (88.46%), Postives = 312/338 (92.31%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           M SSVIA+ERILSY F NK LLEEALTH SY  SASYERLEF+GDSAIGLA+TNYFFLA 
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           P+LHQG LSLLRAANVSTEKLARVAVTHGLYNYVRR++  MD KVKEFVDSVALEGSSV 
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG LMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F VCQRNGKQVDIK+WKNGS +IASVYVDG FVASGSSMQKEIARLNAAREALIKLS SM
Sbjct: 181 FDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DT+IKT VTI+GIDESFEIEGAKQKLHD C ++KWQKP YS+EK LGPSH R FVCSVKI
Sbjct: 241 DTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
            TCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 PTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of CsaV3_4G013380 vs. NCBI nr
Match: XP_022965096.1 (ribonuclease 3-like protein 2 [Cucurbita maxima])

HSP 1 Score: 523.5 bits (1347), Expect = 5.4e-145
Identity = 264/338 (78.11%), Postives = 297/338 (87.87%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           MESSV+A+E I+SYNF NK LLEEALTH SY  SASY+RLEF+GDSAIGLA TNYFFLA 
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           P L QG LSLLRAAN+STEKLARVAV HGLY+YVRR + A+D KV+EFVDSVALE +SV 
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG LMKAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT E+L+VEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F+VCQ+NGKQVDIK+W NGS +++SV+VDG FVASGSS  KEIARLNAAREAL KLS +M
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGTFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           D  I+T VTIDGIDESFEIEGAKQKLHD C K+KW KPNYS EKD GPSH++ F CSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           +T  G  Y+VGDEKSRVKD+ENSAAS+MIRALQE+ +L
Sbjct: 301 STSSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]
BLAST of CsaV3_4G013380 vs. NCBI nr
Match: XP_023551903.1 (ribonuclease 3-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 522.7 bits (1345), Expect = 9.3e-145
Identity = 264/338 (78.11%), Postives = 297/338 (87.87%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           MESSV+A+E I+SYNF NK LLEEALTH SY  SASY+RLEF+GDSAIGLA TNYFFLA 
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           P L QG LSLLRAAN+STEKLARVAV HGLY+YVRR + A+D KV+EFVDSVALE +SV 
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG LMKAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT E+L+VEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F+VCQ+NGKQVDIK+W NGS +++SV+VDG FVASGSS  KEIARLNAAREAL KLS +M
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           D  I+T VTIDGIDESFEIEGAKQKLHD C K+KW KPNYS EKD GPSH++ F CSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           +T  G  Y+VGDEKSRVKD+ENSAAS+MIRALQE+ +L
Sbjct: 301 STSSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]
BLAST of CsaV3_4G013380 vs. TAIR10
Match: AT3G20420.1 (RNAse THREE-like protein 2)

HSP 1 Score: 357.1 bits (915), Expect = 1.2e-98
Identity = 189/337 (56.08%), Postives = 255/337 (75.67%), Query Frame = 0 

Query: 4   SVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASPHL 63
           S+ A+E+IL+Y F+NKSLL+EA+TH S +   SYERLEF+GDSAIGLAI+NY +L  P L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGS-SVHYG 123
               LSLLRAANVSTEKLARV++ HGLY+++RR++P++D KVKEF ++V  E   SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 RLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQ 183
            L+KAPKVLAD+ ES+AGAVYVDVNFDLQ+LWVI RGLLEPI TL++LQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDT 243
           +C ++ K++DIK+WK+G+ SIA +Y+D + +ASG +  K+IARL AA+EAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 RIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI-A 303
                + ID      ++  AK KL+++C K+KW KP YSVE+D      + FVCS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           T   T Y+ GDE+S++K AE+S+A  MIRAL++  +L
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]
BLAST of CsaV3_4G013380 vs. TAIR10
Match: AT1G01040.2 (dicer-like 1)

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-48
Identity = 122/349 (34.96%), Postives = 190/349 (54.44%), Query Frame = 0 

Query: 6    IALERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAITNYFFLASPHL 65
            + LER L Y F  K LL EA+TH S  +S  + Y+RLEFVGD+ +   IT + F     L
Sbjct: 1561 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1620

Query: 66   HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHYGR 125
              G L+ LRAA V+ E  ARVAV H L+ Y+R  S A++ +++EFV  V  E S   +  
Sbjct: 1621 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1680

Query: 126  L----MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 185
                  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1681 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1740

Query: 186  LFQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREAL--IKLS 245
            L + CQ+  + ++ K  ++G+ +   V++DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1741 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1800

Query: 246  DSMDTRIKTFVTIDGIDESFEIEG----------AKQKLHDVCSKRKWQKPNYSVEKDLG 305
            +  +++ K     +  ++  E E            +Q L+D+C ++ W  P+Y   K+ G
Sbjct: 1801 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1860

Query: 306  PSHERIFVCSVKIATC--YGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
            P+H + F   V++ T     T   +G+    VK A++SAA L++  L +
Sbjct: 1861 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1907

[Close]
BLAST of CsaV3_4G013380 vs. TAIR10
Match: AT5G45150.1 (RNAse THREE-like protein 3)

HSP 1 Score: 177.9 bits (450), Expect = 1.0e-44
Identity = 106/257 (41.25%), Postives = 166/257 (64.59%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           M+SSV A+E+IL+Y+F NK+LL+E LTH   + S  ++ L FVG+SA+ LA T + +L  
Sbjct: 411 MDSSVEAVEKILNYSFVNKTLLKELLTH---NNSPLFQGLMFVGESALSLAFTKHLYLTY 470

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           P L    LS+LR AN   +K A VAV  G+Y       P  +    +F++ +  E     
Sbjct: 471 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDDPY- 530

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVE-PQPVTV 180
             R++KAPK+L +++  VAGAVY+DV +++Q+L  I R LLEPIYTL++L+++  QP  +
Sbjct: 531 --RVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLM 590

Query: 181 LFQVCQRNGKQVDIKHWKNGSN--SIASVYVDGKFVASGSSMQKEIARLNAAREALIKLS 240
           LF++  ++GKQ+D ++ K+G +  +IA VY+D  F+ASG + + + A+L AA EA+ KLS
Sbjct: 591 LFRLADKHGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLS 650

Query: 241 DSMDTRIKTFVTIDGID 255
           + M   I+  +  D +D
Sbjct: 651 ECMP--IEKIIHQDNLD 659


HSP 2 Score: 54.3 bits (129), Expect = 1.7e-07
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 0 

Query: 280 YSVEKDLGPSHERIFVCSVK--IATCYGTFYIVGDEKSRVKDAENSAASLMIRALQ 334
           +SVE++ G  +E+  VCSVK  I    GTF+I GD K   K+AENS+A  MIRAL+
Sbjct: 856 FSVEEERGQQNEQKIVCSVKIEIPNIEGTFHIKGDAKPTKKEAENSSADHMIRALE 911

[Close]
BLAST of CsaV3_4G013380 vs. TAIR10
Match: AT4G15417.1 (RNAse II-like 1)

HSP 1 Score: 154.8 bits (390), Expect = 9.2e-38
Identity = 99/231 (42.86%), Postives = 140/231 (60.61%), Query Frame = 0 

Query: 7   ALERILSYNFNNKSLLEEALTHPSY--SASASYERLEFVGDSAIGLAITNYFFLASPHLH 66
           +LE+IL+Y F +KSLL +A T  SY    S SYE LE +GDS + + I   F    P   
Sbjct: 31  SLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLYPKEA 90

Query: 67  QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHYGRL 126
            G L+ LRA NV TEKLARVAV H LY+Y+R   P ++ ++ EFV+  A+E   +H   L
Sbjct: 91  PGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVE--AMEKYPLHSNGL 150

Query: 127 MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVC 186
           +K PKVLADIVES  GA+++D N   + +W +I+ LLEPI  L+++  +  P+T L ++C
Sbjct: 151 LKVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLDKM--KSHPMTELNEMC 210

Query: 187 Q-RNGKQVDIKHWKNGSNSIASVYVDGKFVASG-SSMQKEIARLNAAREAL 234
           Q RN K      W+   N     +++ KFV  G   ++KE AR  AA+ A+
Sbjct: 211 QKRNLKLTSKDTWE--ENQTYCFHIEDKFVGCGHHPVKKETARNFAAKNAI 254

[Close]
BLAST of CsaV3_4G013380 vs. TAIR10
Match: AT3G43920.2 (dicer-like 3)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 76/238 (31.93%), Postives = 128/238 (53.78%), Query Frame = 0 

Query: 2    ESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASP 61
            E  +I LER + + F+ K LL+EA+TH S   S SYERLEF+GDS +   IT + F    
Sbjct: 1195 EDELIELERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYE 1254

Query: 62   HLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHY 121
                G ++ LR+A V+ E  A+VAV + L+ +++R +  ++ ++ +++ S      +   
Sbjct: 1255 QTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRS 1314

Query: 122  GRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 181
               ++ PK L D+VES+AGA+ +D   DL ++W +   LL P+ T ++LQ+   P   L 
Sbjct: 1315 IPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQL--PPYRELN 1374

Query: 182  QVCQRNGKQVDIKHWKNGSNSIASVYV---DGKFVASGSSMQKEIARLNAAREALIKL 237
            ++C   G    +K   +G  + A++ +   D      GS    ++A   AA   L +L
Sbjct: 1375 ELCDSLGYFFRVKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQL 1430

[Close]
BLAST of CsaV3_4G013380 vs. Swiss-Prot
Match: sp|Q9LTQ0|RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.2e-97
Identity = 189/337 (56.08%), Postives = 255/337 (75.67%), Query Frame = 0 

Query: 4   SVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASPHL 63
           S+ A+E+IL+Y F+NKSLL+EA+TH S +   SYERLEF+GDSAIGLAI+NY +L  P L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGS-SVHYG 123
               LSLLRAANVSTEKLARV++ HGLY+++RR++P++D KVKEF ++V  E   SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 RLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQ 183
            L+KAPKVLAD+ ES+AGAVYVDVNFDLQ+LWVI RGLLEPI TL++LQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDT 243
           +C ++ K++DIK+WK+G+ SIA +Y+D + +ASG +  K+IARL AA+EAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 RIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI-A 303
                + ID      ++  AK KL+++C K+KW KP YSVE+D      + FVCS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           T   T Y+ GDE+S++K AE+S+A  MIRAL++  +L
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]
BLAST of CsaV3_4G013380 vs. Swiss-Prot
Match: sp|Q6ATG6|RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 2.0e-66
Identity = 141/277 (50.90%), Postives = 191/277 (68.95%), Query Frame = 0 

Query: 8   LERILSYNFNNKSLLEEALTHPSYSASA-SYERLEFVGDSAIGLAITNYFFLASPHLHQG 67
           +ER+L Y F +  LLEEALTH S++  A SY+RLEFVGDSA+GLA +N+ +L +P L  G
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPG 99

Query: 68  HLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEG----SSVHY- 127
            LS LRAAN+STEKLARVAV H LY  +RR+ P +D+ V +F+++V  E     S+V Y 
Sbjct: 100 PLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYG 159

Query: 128 GRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 187
           G ++KAPKVLADIVE++A AVYVD  FDL+KLW + R L EPI T E   ++ QPVT+L 
Sbjct: 160 GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE--TIDEQPVTMLH 219

Query: 188 QVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMD 247
           ++CQ++GK    K W+ G  ++ +V+V G+ V  GSS QK IA+LNAAR+A  KL+ +  
Sbjct: 220 ELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKK 279

Query: 248 TRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKP 279
             + T V     DE  E+   KQKL++ CS++ W KP
Sbjct: 280 QVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKP 314

[Close]
BLAST of CsaV3_4G013380 vs. Swiss-Prot
Match: sp|Q9SP32|DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 2.1e-47
Identity = 122/349 (34.96%), Postives = 190/349 (54.44%), Query Frame = 0 

Query: 6    IALERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAITNYFFLASPHL 65
            + LER L Y F  K LL EA+TH S  +S  + Y+RLEFVGD+ +   IT + F     L
Sbjct: 1560 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1619

Query: 66   HQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHYGR 125
              G L+ LRAA V+ E  ARVAV H L+ Y+R  S A++ +++EFV  V  E S   +  
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679

Query: 126  L----MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 185
                  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1680 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1739

Query: 186  LFQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREAL--IKLS 245
            L + CQ+  + ++ K  ++G+ +   V++DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1740 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1799

Query: 246  DSMDTRIKTFVTIDGIDESFEIEG----------AKQKLHDVCSKRKWQKPNYSVEKDLG 305
            +  +++ K     +  ++  E E            +Q L+D+C ++ W  P+Y   K+ G
Sbjct: 1800 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1859

Query: 306  PSHERIFVCSVKIATC--YGTFYIVGDEKSRVKDAENSAASLMIRALQE 335
            P+H + F   V++ T     T   +G+    VK A++SAA L++  L +
Sbjct: 1860 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]
BLAST of CsaV3_4G013380 vs. Swiss-Prot
Match: sp|Q8LMR2|DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-47
Identity = 121/333 (36.34%), Postives = 186/333 (55.86%), Query Frame = 0 

Query: 8    LERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAITNYFFLASPHLHQ 67
            L+ +L   F NK LL EA+TH S  +S  + Y+RLEFVGD+ +   IT + F     L  
Sbjct: 1541 LKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPP 1600

Query: 68   GHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHYGRL- 127
            G L+ LRAA V+ E  ARVAV H L+ ++R  S A++ +++EFV  V  E     +    
Sbjct: 1601 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFG 1660

Query: 128  ---MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 187
                KAPKVL DIVES+AGA+++D  +D   +W + + LL P+ T E L +   PV  L 
Sbjct: 1661 LGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM--HPVRELQ 1720

Query: 188  QVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMD 247
            + CQ+  + ++ K  + G+ +   V+VDG  +    + QK++A+  AAR AL+ L +  +
Sbjct: 1721 ERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEK-E 1780

Query: 248  TRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIA 307
            T  K     DG  ++      +Q L+D+C +R+W  P Y    + GP+H + FV SV++ 
Sbjct: 1781 TATKKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVN 1840

Query: 308  TC--YGTFYIVGDEKSRVKDAENSAASLMIRAL 333
            T     T   +G+    VK A++SAA L++  L
Sbjct: 1841 TSDRGWTDECIGEPMPSVKKAKDSAAVLLLELL 1870

[Close]
BLAST of CsaV3_4G013380 vs. Swiss-Prot
Match: sp|Q9FKF0|RTL3_ARATH (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-43
Identity = 106/257 (41.25%), Postives = 166/257 (64.59%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           M+SSV A+E+IL+Y+F NK+LL+E LTH   + S  ++ L FVG+SA+ LA T + +L  
Sbjct: 411 MDSSVEAVEKILNYSFVNKTLLKELLTH---NNSPLFQGLMFVGESALSLAFTKHLYLTY 470

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           P L    LS+LR AN   +K A VAV  G+Y       P  +    +F++ +  E     
Sbjct: 471 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDDPY- 530

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVE-PQPVTV 180
             R++KAPK+L +++  VAGAVY+DV +++Q+L  I R LLEPIYTL++L+++  QP  +
Sbjct: 531 --RVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLM 590

Query: 181 LFQVCQRNGKQVDIKHWKNGSN--SIASVYVDGKFVASGSSMQKEIARLNAAREALIKLS 240
           LF++  ++GKQ+D ++ K+G +  +IA VY+D  F+ASG + + + A+L AA EA+ KLS
Sbjct: 591 LFRLADKHGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLS 650

Query: 241 DSMDTRIKTFVTIDGID 255
           + M   I+  +  D +D
Sbjct: 651 ECMP--IEKIIHQDNLD 659

[Close]
BLAST of CsaV3_4G013380 vs. TrEMBL
Match: tr|A0A0A0L1E2|A0A0A0L1E2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 2.6e-183
Identity = 332/338 (98.22%), Postives = 335/338 (99.11%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLA+TNYFFLAS
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMD KVKEFVDSVALEGSSV 
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG +MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAAREALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of CsaV3_4G013380 vs. TrEMBL
Match: tr|A0A1S3BM12|A0A1S3BM12_CUCME (ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.1e-162
Identity = 299/338 (88.46%), Postives = 312/338 (92.31%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           M SSVIA+ERILSY F NK LLEEALTH SY  SASYERLEF+GDSAIGLA+TNYFFLA 
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           P+LHQG LSLLRAANVSTEKLARVAVTHGLYNYVRR++  MD KVKEFVDSVALEGSSV 
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVP 120

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG LMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F VCQRNGKQVDIK+WKNGS +IASVYVDG FVASGSSMQKEIARLNAAREALIKLS SM
Sbjct: 181 FDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSM 240

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
           DT+IKT VTI+GIDESFEIEGAKQKLHD C ++KWQKP YS+EK LGPSH R FVCSVKI
Sbjct: 241 DTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKI 300

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
            TCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL
Sbjct: 301 PTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]
BLAST of CsaV3_4G013380 vs. TrEMBL
Match: tr|A0A1S3BMA5|A0A1S3BMA5_CUCME (ribonuclease 3-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491098 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 3.7e-126
Identity = 240/332 (72.29%), Postives = 276/332 (83.13%), Query Frame = 0 

Query: 7   ALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLASPHLHQG 66
           A+ER LSY F NK LLE ALTH SY  +ASY+RLEF+GDSAIGLAI+NYFF   P L QG
Sbjct: 3   AIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLDQG 62

Query: 67  HLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHYGRLMK 126
            L+LLRAANVSTEKLARVAV HGLY+YVRR +  +D  V+EF D+VALE +S+ YG L K
Sbjct: 63  RLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGLKK 122

Query: 127 APKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVCQR 186
           APKVLADIVESVAGA+YVDV FDLQKLW II+ LL+PIYT E+L+ EPQPVT+LF+VCQ+
Sbjct: 123 APKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVCQK 182

Query: 187 NGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSMDTRIKT 246
           NGKQV IK+ + GS ++A VYVD   VASGSS QK IARLNAAR+ALI LSDSMDT+IKT
Sbjct: 183 NGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKIKT 242

Query: 247 FVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKIATCYGT 306
            VTIDGID SFEIEGA QKLHD CS++KWQ P+YSVE+ LG  HER FVCSVKI+T   T
Sbjct: 243 VVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYSVEEVLGRPHERRFVCSVKISTYDDT 302

Query: 307 FYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
             I+GDEKSRVK+A+NSAASLMIR LQERK+L
Sbjct: 303 HSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 334

[Close]
BLAST of CsaV3_4G013380 vs. TrEMBL
Match: tr|A0A2H5QMR4|A0A2H5QMR4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_244710 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.6e-121
Identity = 220/338 (65.09%), Postives = 270/338 (79.88%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           ME +V  +E I++YNF NK LLEEALTH SY+ S SY+RLEF+GD+A+GLA++NY FLA 
Sbjct: 32  MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAY 91

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           P L  G LSLLRAAN+STEKLARVAV HG Y +VR  + A+D KVKEF ++V+ E ++  
Sbjct: 92  PQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAV 151

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG  +KAPKVLADIVES+A A+YVD++FDLQKLW+I RGLLEPI TLEELQ +PQPVT+L
Sbjct: 152 YGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLL 211

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F++CQ+NGKQVDIKHW+    +IASVYVDG FVAS SS QKEIA+LNAAREAL KL+ SM
Sbjct: 212 FKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSM 271

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
                     D IDE FEIE AKQKLH++C K+KW KP+Y +EKD GPSH++ F+ +V+I
Sbjct: 272 PVNCDVCEIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQI 331

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           AT  G  +I GDEKSRVKDAENSAAS+M+RAL+E  +L
Sbjct: 332 ATTDGVLFITGDEKSRVKDAENSAASMMLRALRESTYL 369

[Close]
BLAST of CsaV3_4G013380 vs. TrEMBL
Match: tr|A0A067F3Y1|A0A067F3Y1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g017515mg PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.6e-121
Identity = 220/338 (65.09%), Postives = 270/338 (79.88%), Query Frame = 0 

Query: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
           ME +V  +E I++YNF NK LLEEALTH SY+ S SY+RLEF+GD+A+GLA++NY FLA 
Sbjct: 32  MEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAY 91

Query: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVH 120
           P L  G LSLLRAAN+STEKLARVAV HG Y +VR  + A+D KVKEF ++V+ E ++  
Sbjct: 92  PQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAV 151

Query: 121 YGRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180
           YG  +KAPKVLADIVES+A A+YVD++FDLQKLW+I RGLLEPI TLEELQ +PQPVT+L
Sbjct: 152 YGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLL 211

Query: 181 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240
           F++CQ+NGKQVDIKHW+    +IASVYVDG FVAS SS QKEIA+LNAAREAL KL+ SM
Sbjct: 212 FKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSM 271

Query: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300
                     D IDE FEIE AKQKLH++C K+KW KP+Y +EKD GPSH++ F+ +V+I
Sbjct: 272 PVNCDVCEIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQI 331

Query: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 339
           AT  G  +I GDEKSRVKDAENSAAS+M+RAL+E  +L
Sbjct: 332 ATTDGVLFITGDEKSRVKDAENSAASMMLRALRESTYL 369

The following BLAST results are available for this feature:
BLAST of CsaV3_4G013380 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53951.13.9e-18398.22hypothetical protein Csa_4G192230 [Cucumis sativus][more]
XP_011654357.13.9e-18398.22PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus][more]
XP_008449146.11.7e-16288.46PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo][more]
XP_022965096.15.4e-14578.11ribonuclease 3-like protein 2 [Cucurbita maxima][more]
XP_023551903.19.3e-14578.11ribonuclease 3-like protein 2 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_4G013380 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20420.11.2e-9856.08RNAse THREE-like protein 2[more]
AT1G01040.21.2e-4834.96dicer-like 1[more]
AT5G45150.11.0e-4441.25RNAse THREE-like protein 3[more]
AT4G15417.19.2e-3842.86RNAse II-like 1[more]
AT3G43920.21.3e-2831.93dicer-like 3[more]
BLAST of CsaV3_4G013380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LTQ0|RTL2_ARATH2.2e-9756.08Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1[more]
sp|Q6ATG6|RTL2_ORYSJ2.0e-6650.90Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0... [more]
sp|Q9SP32|DCL1_ARATH2.1e-4734.96Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV... [more]
sp|Q8LMR2|DCL1_ORYSJ2.7e-4736.34Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL... [more]
sp|Q9FKF0|RTL3_ARATH1.8e-4341.25Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1[more]
BLAST of CsaV3_4G013380 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L1E2|A0A0A0L1E2_CUCSA2.6e-18398.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1[more]
tr|A0A1S3BM12|A0A1S3BM12_CUCME1.1e-16288.46ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1[more]
tr|A0A1S3BMA5|A0A1S3BMA5_CUCME3.7e-12672.29ribonuclease 3-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491098... [more]
tr|A0A2H5QMR4|A0A2H5QMR4_CITUN1.6e-12165.09Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_244710 PE=4 SV=1[more]
tr|A0A067F3Y1|A0A067F3Y1_CITSI1.6e-12165.09Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g017515mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR036389RNase_III_sf
IPR014720dsRBD_dom
IPR000999RNase_III_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0030422 production of siRNA involved in RNA interference
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0016442 RISC complex
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G013380.1CsaV3_4G013380.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 20..170
e-value: 6.0E-32
score: 122.1
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 38..145
e-value: 7.2E-21
score: 74.7
IPR000999Ribonuclease III domainPROSITEPS00517RNASE_3_1coord: 38..46
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 5..147
score: 33.395
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 20..170
e-value: 1.0583E-37
score: 131.966
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 262..333
e-value: 8.6E-11
score: 51.8
coord: 176..237
e-value: 0.016
score: 22.1
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 262..332
e-value: 3.2E-12
score: 46.9
coord: 176..236
e-value: 1.2E-5
score: 25.8
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 175..238
score: 9.586
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 261..334
score: 10.63
IPR014720Double-stranded RNA-binding domainCDDcd00048DSRMcoord: 262..332
e-value: 1.57572E-15
score: 69.2235
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3DG3DSA:1.10.1520.10coord: 1..173
e-value: 4.7E-50
score: 171.8
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILYSSF69065RNase III domain-likecoord: 3..95
coord: 127..166
NoneNo IPR availableGENE3DG3DSA:3.30.160.20coord: 174..246
e-value: 1.1E-7
score: 33.8
NoneNo IPR availableGENE3DG3DSA:3.30.160.20coord: 268..334
e-value: 8.1E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 3..243
NoneNo IPR availablePANTHERPTHR14950:SF35RIBONUCLEASE 3-LIKE PROTEIN 2-RELATEDcoord: 3..243
NoneNo IPR availableSUPERFAMILYSSF54768dsRNA-binding domain-likecoord: 261..335
NoneNo IPR availableSUPERFAMILYSSF54768dsRNA-binding domain-likecoord: 129..236

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G013380CSPI04G11360Wild cucumber (PI 183967)cpicucB213
CsaV3_4G013380Cucsa.023960Cucumber (Gy14) v1cgycucB530
CsaV3_4G013380CsGy4G010900Cucumber (Gy14) v2cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G013380Silver-seed gourdcarcucB0313
CsaV3_4G013380Silver-seed gourdcarcucB0662
CsaV3_4G013380Cucurbita maxima (Rimu)cmacucB0792
CsaV3_4G013380Cucurbita maxima (Rimu)cmacucB1017
CsaV3_4G013380Cucurbita moschata (Rifu)cmocucB0774
CsaV3_4G013380Cucurbita moschata (Rifu)cmocucB1000
CsaV3_4G013380Cucurbita pepo (Zucchini)cpecucB0085
CsaV3_4G013380Cucurbita pepo (Zucchini)cpecucB0612
CsaV3_4G013380Bottle gourd (USVL1VR-Ls)cuclsiB280
CsaV3_4G013380Melon (DHL92) v3.5.1cucmeB328
CsaV3_4G013380Melon (DHL92) v3.6.1cucmedB321
CsaV3_4G013380Watermelon (Charleston Gray)cucwcgB320
CsaV3_4G013380Watermelon (97103) v1cucwmB356
CsaV3_4G013380Watermelon (97103) v2cucwmbB309
CsaV3_4G013380Wax gourdcucwgoB410