CSPI04G07030 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G07030
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTy3/Gypsy polyprotein/retrotransposon, putative
LocationChr4 : 4939863 .. 4941813 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATATTTTAAACAATTTTGTTGTTTGATAGTTTCAAAATTTGGGACAAAATAATAAAGAAATTTTGGAGCAGTGTGTATAGTACGTCGGGTTTTAGCGTAAGGCATAAGGCAGTAAATAGCACTAACGCCAAAATCGGTCACCCAATCCCGGGTTCGTATGAAAATCGTAGGTATGAAACTCTCTTAATCTTTTCCCCTTTTTTTTACCTCAATCGACATTCATCTTCCTCCACTTATCTACTGCCATTTTTCATTTAGGGTTTGGATTTTAGCATTCATCTCTTTCCGATCATCTAGTTTTCATTTCGTTCGTTGTTGTTCGTCACTTTTTTTTCTTCTTCTTTTTTTATCTCTCGATTGTAGTATCTTTTCGTGACTGTTCGTTGTTTCCATTGTTTGATTTTGTGGAACTCTGGGAGCTCGCGGTTTCCTTTTAATGATTTTTTTTTGTAATGTTCTCTTGTTGATAATGCCCTTCCGAAAAAAAAAAAAAATAAACACCCAGCCTGACCAAAACTAACGAACAGTCTAGCTATAGCCATGAGTTCAACTTTAGCCATAATTTGGAAATTTTACTCTAGAGCCGGACTTGGTTGAGATCGTCTATTTATTTTCCTGGTTGTATTTTCTCTGTACTGTTTGTTATGTTTATTTCAACAGATTGTGTGAAGTTATTGAAACTTTTTTACAGATTTTCTTTTCATGGTTTTATGTAATGATTGCTTTCTGGTTCTTCTTAGATGATCAAATTCTTTTTGCTGATTATACTGTCTATGTACTGTTTGTTAAGTTAATTTAAACAGATGATAAGAAATTATTTATCTATTATAGGTTCTCTGCTTTTAGTTGCATAATGTTTGGTGCTTGCTTTAAACTTAGATAAACATAGTAGGTTAACTGAGGTTTATCTTTTGTGTTGGAGACATACGAAAAACAATGGCTCAATTGGAAGAAGTTGTTTCTACAGTGAAGACTAACGATCACTTAGTTGCAGCTGAACCTTCAGTGAATTTGGGAAATGTTTATGACGAAATTTGCAACTTAGTAAGTGAAATGAGGATTATTGCAGCTAAACAGACTGATGAAGAACGTACCAACAAGTCTAGTATGTTTTTTGCCTGTGAACCTCCTAGTTTTGGAGAAGACACCGATCCCTTAGTTGCTCAACGCTGGATTTTGATTTTAGAGAATATCTTTGATTTGATACGATGTTCAGACGAGCACAAAGTTTCTTTCGCTTGTTTACGTCTGAAAGATGCTGCATTTTCTTGGTGGATGGTGATGCATACGGACTTGGAGGCTGATGGGGTTACAGTTACATGGCAGAAATTTAAGGAATTGTTTGAGAAGAGATATTTACCTAGTTGGTTGAAGCTCGAGAAGTTTCGTGAACTGTGTAATTTGGAGCAAGGAGATGGAACTGTAGCTGAGTATGACGAACAATTCATTAAGTTGGCTTCTCTTGCCCACGAGTTTATTCCAGATGAAGCTTGGGAAGCTCGCTTGTTTGGTGATGGTTTAAGGGCAGATATTAGAGGACAAGTTTGCGTCTTAAACAATGTCTCGTACGCCGAGATTAGAAACCTGGCATTAATGGTGGAACAGCGCATTAACAAATAATCAAAAAATTTGAAGTAGTAAGAAAAGGGGTAGTAGAAGCAAACAGATTTTGGAGGTTTCAGCTATGAATTATCTTCACTTCTCAATGTAGGTATTGACTGTTATTGTTAGTTCATTACTCCATCACTAGAAAGTTTCATAGCTTTAGGAAGTTTATTTTGATAGTGTTTTGTTCTTCCCCAAAAAAACAGAATTCCACGCCCCCCTCTCTGGTCTATAGGATTTATGGTAATGGTAGTCTTATATACTTTCGTTTGGTGTGAAGTTTATCAGCTTTGTGTAAACAGTTCTTTGTTTCATTTCTTCATCCCATTAATGTTTTCTATTGG

mRNA sequence

ATGAAAATCGTAGACATACGAAAAACAATGGCTCAATTGGAAGAAGTTGTTTCTACAGTGAAGACTAACGATCACTTAGTTGCAGCTGAACCTTCAGTGAATTTGGGAAATGTTTATGACGAAATTTGCAACTTAGTAAGTGAAATGAGGATTATTGCAGCTAAACAGACTGATGAAGAACGTACCAACAAGTCTAGTATGTTTTTTGCCTGTGAACCTCCTAGTTTTGGAGAAGACACCGATCCCTTAGTTGCTCAACGCTGGATTTTGATTTTAGAGAATATCTTTGATTTGATACGATGTTCAGACGAGCACAAAGTTTCTTTCGCTTGTTTACGTCTGAAAGATGCTGCATTTTCTTGGTGGATGGTGATGCATACGGACTTGGAGGCTGATGGGGTTACAGTTACATGGCAGAAATTTAAGGAATTGTTTGAGAAGAGATATTTACCTAGTTGGTTGAAGCTCGAGAAGTTTCGTGAACTGTGTAATTTGGAGCAAGGAGATGGAACTGTAGCTGAGTATGACGAACAATTCATTAAGTTGGCTTCTCTTGCCCACGAGTTTATTCCAGATGAAGCTTGGGAAGCTCGCTTGTTTGGTGATGGTTTAAGGGCAGATATTAGAGGACAAGTTTGCGTCTTAAACAATGTCTCGTACGCCGAGATTAGAAACCTGGCATTAATGGTGGAACAGCGCATTAACAAATAA

Coding sequence (CDS)

ATGAAAATCGTAGACATACGAAAAACAATGGCTCAATTGGAAGAAGTTGTTTCTACAGTGAAGACTAACGATCACTTAGTTGCAGCTGAACCTTCAGTGAATTTGGGAAATGTTTATGACGAAATTTGCAACTTAGTAAGTGAAATGAGGATTATTGCAGCTAAACAGACTGATGAAGAACGTACCAACAAGTCTAGTATGTTTTTTGCCTGTGAACCTCCTAGTTTTGGAGAAGACACCGATCCCTTAGTTGCTCAACGCTGGATTTTGATTTTAGAGAATATCTTTGATTTGATACGATGTTCAGACGAGCACAAAGTTTCTTTCGCTTGTTTACGTCTGAAAGATGCTGCATTTTCTTGGTGGATGGTGATGCATACGGACTTGGAGGCTGATGGGGTTACAGTTACATGGCAGAAATTTAAGGAATTGTTTGAGAAGAGATATTTACCTAGTTGGTTGAAGCTCGAGAAGTTTCGTGAACTGTGTAATTTGGAGCAAGGAGATGGAACTGTAGCTGAGTATGACGAACAATTCATTAAGTTGGCTTCTCTTGCCCACGAGTTTATTCCAGATGAAGCTTGGGAAGCTCGCTTGTTTGGTGATGGTTTAAGGGCAGATATTAGAGGACAAGTTTGCGTCTTAAACAATGTCTCGTACGCCGAGATTAGAAACCTGGCATTAATGGTGGAACAGCGCATTAACAAATAA
Homology
[Close]
BLAST of CSPI04G07030 vs. TrEMBL
Match: A0A0A0L042_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056700 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 6.2e-130
Identity = 232/236 (98.31%), Postives = 233/236 (98.73%), Query Frame = 1 

Query: 1   MKIVDIRKTMAQLEEVVSTVKTNDHLVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEE 60
           MKIVDIRKTMAQLEEVVSTVKTND LVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEE
Sbjct: 1   MKIVDIRKTMAQLEEVVSTVKTNDRLVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEE 60

Query: 61  RTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFS 120
           RTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFS
Sbjct: 61  RTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFS 120

Query: 121 WWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFI 180
           WWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFI
Sbjct: 121 WWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFI 180

Query: 181 KLASLAHEFIPDEAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLALMVEQRINK 237
           KLASLAHEFIPDEAWEARLFGDGLRADIRGQVC+LNN S AEIRNLALMVEQRINK
Sbjct: 181 KLASLAHEFIPDEAWEARLFGDGLRADIRGQVCLLNNASDAEIRNLALMVEQRINK 236

[Close]
BLAST of CSPI04G07030 vs. TrEMBL
Match: F6HMZ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04430 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1 

Query: 56  QTDEERTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLK 115
           QT   R N    F    PP F   TDP  A+ WIL +E  F +I CS+E K S+A   L 
Sbjct: 253 QTSSSRGNSFDDFKKLGPPYFSGATDPTEAEAWILKVEKFFGVIDCSEEQKASYAAFMLD 312

Query: 116 DAAFSWWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEY 175
             A  WW +    LE  G  +TW++FKE F K+Y P  ++ +K  E  +LE+GD TVA+Y
Sbjct: 313 KEADHWWRMTRRLLEDQG-PITWRQFKEAFYKKYFPDSVRRQKVGEFIHLERGDMTVAQY 372

Query: 176 DEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLALMVEQ 233
           + +F +L+  + + I  E  +A  F DGL+  ++ ++ +L    Y+E+ + AL+ E+
Sbjct: 373 EAKFTELSCFSPQLIATEEEKALKFQDGLKPYLKNKISILKLGVYSEVVDRALIAEK 428

[Close]
BLAST of CSPI04G07030 vs. TrEMBL
Match: C7J7N6_ORYSJ (Os10g0357350 protein OS=Oryza sativa subsp. japonica GN=Os10g0357350 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-24
Identity = 59/185 (31.89%), Postives = 102/185 (55.14%), Query Frame = 1 

Query: 48  EMRIIAAKQTDEERTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKV 107
           +M I+      +   N    F   +PP+F    +PL A+ WI+ +E  F+ + C+D+ K+
Sbjct: 142 QMEILERITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKI 201

Query: 108 SFACLRLKDAAFSWWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQ 167
            +A   L+ +AF WW   H    ++ + +TW+ FKE F K+Y P  +K  K +E   L+Q
Sbjct: 202 IYATYMLQSSAFEWWDA-HKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQ 261

Query: 168 GDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLA 227
           G+ +VAEY+ +F +LA  A EF+  +  +AR F  GLR  ++ +V       + E+ + A
Sbjct: 262 GNKSVAEYEIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKA 321

Query: 228 LMVEQ 233
            ++E+
Sbjct: 322 QLLEK 325

[Close]
BLAST of CSPI04G07030 vs. TrEMBL
Match: Q7G6A5_ORYSJ (Putative 22 kDa kafirin cluster; Ty3-Gypsy type OS=Oryza sativa subsp. japonica GN=OSJNAb0075K12.33 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-24
Identity = 59/185 (31.89%), Postives = 102/185 (55.14%), Query Frame = 1 

Query: 48  EMRIIAAKQTDEERTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKV 107
           +M I+      +   N    F   +PP+F    +PL A+ WI+ +E  F+ + C+D+ K+
Sbjct: 54  QMEILERITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKI 113

Query: 108 SFACLRLKDAAFSWWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQ 167
            +A   L+ +AF WW   H    ++ + +TW+ FKE F K+Y P  +K  K +E   L+Q
Sbjct: 114 IYATYMLQSSAFEWWDA-HKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQ 173

Query: 168 GDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLA 227
           G+ +VAEY+ +F +LA  A EF+  +  +AR F  GLR  ++ +V       + E+ + A
Sbjct: 174 GNKSVAEYEIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKA 233

Query: 228 LMVEQ 233
            ++E+
Sbjct: 234 QLLEK 237

[Close]
BLAST of CSPI04G07030 vs. TrEMBL
Match: Q8RU68_ORYSA (Putative 22 kDa kafirin cluster; Ty3-Gypsy type OS=Oryza sativa GN=OSJNBa0022D10.4 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-24
Identity = 59/185 (31.89%), Postives = 102/185 (55.14%), Query Frame = 1 

Query: 48  EMRIIAAKQTDEERTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKV 107
           +M I+      +   N    F   +PP+F    +PL A+ WI+ +E  F+ + C+D+ K+
Sbjct: 54  QMEILERITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKI 113

Query: 108 SFACLRLKDAAFSWWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQ 167
            +A   L+ +AF WW   H    ++ + +TW+ FKE F K+Y P  +K  K +E   L+Q
Sbjct: 114 IYATYMLQSSAFEWWDA-HKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQ 173

Query: 168 GDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLA 227
           G+ +VAEY+ +F +LA  A EF+  +  +AR F  GLR  ++ +V       + E+ + A
Sbjct: 174 GNKSVAEYEIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKA 233

Query: 228 LMVEQ 233
            ++E+
Sbjct: 234 QLLEK 237

[Close]
BLAST of CSPI04G07030 vs. NCBI nr
Match: gi|449459990|ref|XP_004147729.1| (PREDICTED: uncharacterized protein LOC101209793 isoform X1 [Cucumis sativus])

HSP 1 Score: 471.5 bits (1212), Expect = 8.8e-130
Identity = 232/236 (98.31%), Postives = 233/236 (98.73%), Query Frame = 1 

Query: 1   MKIVDIRKTMAQLEEVVSTVKTNDHLVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEE 60
           MKIVDIRKTMAQLEEVVSTVKTND LVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEE
Sbjct: 1   MKIVDIRKTMAQLEEVVSTVKTNDRLVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEE 60

Query: 61  RTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFS 120
           RTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFS
Sbjct: 61  RTNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFS 120

Query: 121 WWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFI 180
           WWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFI
Sbjct: 121 WWMVMHTDLEADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFI 180

Query: 181 KLASLAHEFIPDEAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLALMVEQRINK 237
           KLASLAHEFIPDEAWEARLFGDGLRADIRGQVC+LNN S AEIRNLALMVEQRINK
Sbjct: 181 KLASLAHEFIPDEAWEARLFGDGLRADIRGQVCLLNNASDAEIRNLALMVEQRINK 236

[Close]
BLAST of CSPI04G07030 vs. NCBI nr
Match: gi|778691251|ref|XP_011653248.1| (PREDICTED: uncharacterized protein LOC101209793 isoform X2 [Cucumis sativus])

HSP 1 Score: 456.1 bits (1172), Expect = 3.8e-125
Identity = 223/227 (98.24%), Postives = 224/227 (98.68%), Query Frame = 1 

Query: 10  MAQLEEVVSTVKTNDHLVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEERTNKSSMFF 69
           MAQLEEVVSTVKTND LVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEERTNKSSMFF
Sbjct: 1   MAQLEEVVSTVKTNDRLVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEERTNKSSMFF 60

Query: 70  ACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFSWWMVMHTDL 129
           ACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFSWWMVMHTDL
Sbjct: 61  ACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFSWWMVMHTDL 120

Query: 130 EADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEF 189
           EADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEF
Sbjct: 121 EADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEF 180

Query: 190 IPDEAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLALMVEQRINK 237
           IPDEAWEARLFGDGLRADIRGQVC+LNN S AEIRNLALMVEQRINK
Sbjct: 181 IPDEAWEARLFGDGLRADIRGQVCLLNNASDAEIRNLALMVEQRINK 227

[Close]
BLAST of CSPI04G07030 vs. NCBI nr
Match: gi|659101972|ref|XP_008451886.1| (PREDICTED: uncharacterized protein LOC103493045 [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 8.3e-120
Identity = 212/227 (93.39%), Postives = 220/227 (96.92%), Query Frame = 1 

Query: 10  MAQLEEVVSTVKTNDHLVAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEERTNKSSMFF 69
           MAQLEEVVSTVKTN+HLVAAEPSVNLGNVYDEICNLVSE+RIIAAKQTDEER+NKSSMFF
Sbjct: 1   MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFF 60

Query: 70  ACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFSWWMVMHTDL 129
           ACEPPSFGEDTDPLVAQRWILILENIFDLIRCSD+ KVSFA LRLKDAAFSWWMV+HTDL
Sbjct: 61  ACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAAFSWWMVLHTDL 120

Query: 130 EADGVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEF 189
           EADGVTVTW+KFKELFEKRYLP WLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEF
Sbjct: 121 EADGVTVTWEKFKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEF 180

Query: 190 IPDEAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLALMVEQRINK 237
           IPDEAWEARLFGDGLRADIR Q+C  NNVSYAE+RNLALM EQRINK
Sbjct: 181 IPDEAWEARLFGDGLRADIRAQICFSNNVSYAEVRNLALMEEQRINK 227

[Close]
BLAST of CSPI04G07030 vs. NCBI nr
Match: gi|695044776|ref|XP_009410153.1| (PREDICTED: uncharacterized protein LOC103992242 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 132.5 bits (332), Expect = 9.7e-28
Identity = 73/205 (35.61%), Postives = 110/205 (53.66%), Query Frame = 1 

Query: 37  NVYDEICNLVSEMRIIAAKQTDEE-----RTNKSSMFFACEPPSFGEDTDPLVAQRWILI 96
           N  D++  +++ +R    +Q + +     R N    F    PP F    DP+ A+RWI  
Sbjct: 32  NAQDDVHGVLNAIRGYFERQEERDEIPRGRNNTLDHFKRLGPPIFEGKPDPIFAERWIRQ 91

Query: 97  LENIFDLIRCSDEHKVSFACLRLKDAAFSWWMVMHTDLEADGVTVTWQKFKELFEKRYLP 156
           +E  F  I C +  KV FA   L+  A +WW      LEA G  VTW++FK+ F +++ P
Sbjct: 92  VEKTFKAIECRENQKVPFASFILEGKADTWWTSKRRMLEAGGNVVTWEQFKDAFYEQFFP 151

Query: 157 SWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRGQ 216
             ++ EK +E  ++ QG+ TV EYD  F +LA  +     +E+  AR F  GLR+ IR  
Sbjct: 152 DSVRFEKQQEFLSIRQGNRTVMEYDHHFTELAQFSPYIAFNESQRARHFERGLRSSIRKS 211

Query: 217 VCVLNNVSYAEIRNLALMVEQRINK 237
           V VL   +YAE+ N AL+VE+  N+
Sbjct: 212 VAVLILPTYAEVLNRALVVEKLDNE 236

[Close]
BLAST of CSPI04G07030 vs. NCBI nr
Match: gi|672209040|ref|XP_008780574.1| (PREDICTED: uncharacterized protein LOC103700405, partial [Phoenix dactylifera])

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 65/163 (39.88%), Postives = 95/163 (58.28%), Query Frame = 1 

Query: 73  PPSFGEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFSWWMVMHTDLEAD 132
           P +F   +DPL A+ W+  +E +F+ +RC DE +V+FA   L   A  WW V    +  +
Sbjct: 67  PSAFKGTSDPLEAETWLNEMEKVFNALRCPDEDRVTFATFMLLGEADIWWNVERGKMGQN 126

Query: 133 GVTVTWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPD 192
             ++TW+ FKELF  +Y+P  ++ +KFRE   LEQG+ TVAEY  +F +LA  A   + +
Sbjct: 127 ASSLTWEGFKELFRDKYIPQSVRRQKFREFTQLEQGNMTVAEYAAKFEELARYAPGQVEN 186

Query: 193 EAWEARLFGDGLRADIRGQVCVLNNVSYAEIRNLALMVEQRIN 236
           E   A  F  GLRA IR QV      SY ++ N A +VE+ +N
Sbjct: 187 ERERAEKFDSGLRARIRQQVSTFELSSYKDVVNKAWVVERGLN 229

The following BLAST results are available for this feature:
BLAST of CSPI04G07030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G07030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L042_CUCSA6.2e-13098.31Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056700 PE=4 SV=1[more]
F6HMZ9_VITVI3.7e-2636.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04430 PE=4 SV=... [more]
C7J7N6_ORYSJ1.6e-2431.89Os10g0357350 protein OS=Oryza sativa subsp. japonica GN=Os10g0357350 PE=4 SV=1[more]
Q7G6A5_ORYSJ1.6e-2431.89Putative 22 kDa kafirin cluster; Ty3-Gypsy type OS=Oryza sativa subsp. japonica ... [more]
Q8RU68_ORYSA1.6e-2431.89Putative 22 kDa kafirin cluster; Ty3-Gypsy type OS=Oryza sativa GN=OSJNBa0022D10... [more]
BLAST of CSPI04G07030 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G07030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459990|ref|XP_004147729.1|8.8e-13098.31PREDICTED: uncharacterized protein LOC101209793 isoform X1 [Cucumis sativus][more]
gi|778691251|ref|XP_011653248.1|3.8e-12598.24PREDICTED: uncharacterized protein LOC101209793 isoform X2 [Cucumis sativus][more]
gi|659101972|ref|XP_008451886.1|8.3e-12093.39PREDICTED: uncharacterized protein LOC103493045 [Cucumis melo][more]
gi|695044776|ref|XP_009410153.1|9.7e-2835.61PREDICTED: uncharacterized protein LOC103992242 [Musa acuminata subsp. malaccens... [more]
gi|672209040|ref|XP_008780574.1|1.8e-2639.88PREDICTED: uncharacterized protein LOC103700405, partial [Phoenix dactylifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G07030.1CSPI04G07030.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 109..204
score: 1.9
NoneNo IPR availablePANTHERPTHR10178GAG/POL/ENV POLYPROTEINcoord: 2..188
score: 2.7
NoneNo IPR availablePANTHERPTHR10178:SF283SUBFAMILY NOT NAMEDcoord: 2..188
score: 2.7