CSPI04G06490 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G06490
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 4509518 .. 4509706 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTGAGACGTTTGAGGAATCTGAGACAGATGTTAGTCCTCATTCTGAAAATCATATGCAATTGATAAACGATCATATATCGATTGCAACAAATGTTGAATGTCCGTTTAGTGTAGAATCAAGTGAAGAAAGAGGACATGTGGGTGATAGAAACCCAACTCGGGATGATCAGTCGATGTGTTAG

mRNA sequence

ATGGATGTTGAGACGTTTGAGGAATCTGAGACAGATGTTAGTCCTCATTCTGAAAATCATATGCAATTGATAAACGATCATATATCGATTGCAACAAATGTTGAATGTCCGTTTAGTGTAGAATCAAGTGAAGAAAGAGGACATGTGGGTGATAGAAACCCAACTCGGGATGATCAGTCGATGTGTTAG

Coding sequence (CDS)

ATGGATGTTGAGACGTTTGAGGAATCTGAGACAGATGTTAGTCCTCATTCTGAAAATCATATGCAATTGATAAACGATCATATATCGATTGCAACAAATGTTGAATGTCCGTTTAGTGTAGAATCAAGTGAAGAAAGAGGACATGTGGGTGATAGAAACCCAACTCGGGATGATCAGTCGATGTGTTAG
Homology
[Close]
BLAST of CSPI04G06490 vs. TrEMBL
Match: A0A0A0KV41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052680 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.8e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS 60
          MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS
Sbjct: 1  MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS 60

Query: 61 MC 63
          MC
Sbjct: 61 MC 62

[Close]
BLAST of CSPI04G06490 vs. NCBI nr
Match: gi|700198260|gb|KGN53418.1| (hypothetical protein Csa_4G052680 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 9.8e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS 60
          MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS
Sbjct: 1  MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS 60

Query: 61 MC 63
          MC
Sbjct: 61 MC 62

The following BLAST results are available for this feature:
BLAST of CSPI04G06490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G06490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV41_CUCSA6.8e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052680 PE=4 SV=1[more]
BLAST of CSPI04G06490 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G06490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198260|gb|KGN53418.1|9.8e-28100.00hypothetical protein Csa_4G052680 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G06490.1CSPI04G06490.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G06490Csa4G052680Cucumber (Chinese Long) v2cpicuB182
CSPI04G06490CsaV3_4G006710Cucumber (Chinese Long) v3cpicucB213
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G06490Melon (DHL92) v3.6.1cpimedB256
CSPI04G06490Melon (DHL92) v3.6.1cpimedB285
CSPI04G06490Melon (DHL92) v3.6.1cpimedB305
CSPI04G06490Cucumber (Gy14) v2cgybcpiB125
CSPI04G06490Cucumber (Gy14) v2cgybcpiB168
CSPI04G06490Cucumber (Gy14) v2cgybcpiB224
CSPI04G06490Silver-seed gourdcarcpiB0048
CSPI04G06490Silver-seed gourdcarcpiB0687
CSPI04G06490Cucumber (Chinese Long) v3cpicucB210
CSPI04G06490Cucumber (Chinese Long) v3cpicucB236
CSPI04G06490Watermelon (97103) v2cpiwmbB276
CSPI04G06490Watermelon (97103) v2cpiwmbB321
CSPI04G06490Watermelon (97103) v2cpiwmbB331
CSPI04G06490Wax gourdcpiwgoB365
CSPI04G06490Wax gourdcpiwgoB367
CSPI04G06490Wild cucumber (PI 183967)cpicpiB108
CSPI04G06490Wild cucumber (PI 183967)cpicpiB157
CSPI04G06490Cucumber (Gy14) v1cgycpiB147
CSPI04G06490Cucumber (Gy14) v1cgycpiB456
CSPI04G06490Cucurbita maxima (Rimu)cmacpiB342
CSPI04G06490Cucurbita maxima (Rimu)cmacpiB721
CSPI04G06490Cucurbita moschata (Rifu)cmocpiB285
CSPI04G06490Cucurbita moschata (Rifu)cmocpiB332
CSPI04G06490Cucurbita moschata (Rifu)cmocpiB715
CSPI04G06490Cucumber (Chinese Long) v2cpicuB179
CSPI04G06490Cucumber (Chinese Long) v2cpicuB195
CSPI04G06490Melon (DHL92) v3.5.1cpimeB260
CSPI04G06490Melon (DHL92) v3.5.1cpimeB310
CSPI04G06490Watermelon (Charleston Gray)cpiwcgB299
CSPI04G06490Watermelon (Charleston Gray)cpiwcgB341
CSPI04G06490Watermelon (97103) v1cpiwmB308
CSPI04G06490Watermelon (97103) v1cpiwmB329
CSPI04G06490Watermelon (97103) v1cpiwmB334
CSPI04G06490Cucurbita pepo (Zucchini)cpecpiB175
CSPI04G06490Cucurbita pepo (Zucchini)cpecpiB223
CSPI04G06490Cucurbita pepo (Zucchini)cpecpiB405
CSPI04G06490Bottle gourd (USVL1VR-Ls)cpilsiB244
CSPI04G06490Bottle gourd (USVL1VR-Ls)cpilsiB298
CSPI04G06490Bottle gourd (USVL1VR-Ls)cpilsiB304