CSPI04G06490.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI04G06490.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 4509518 .. 4509706 (+)
Sequence length189
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTGAGACGTTTGAGGAATCTGAGACAGATGTTAGTCCTCATTCTGAAAATCATATGCAATTGATAAACGATCATATATCGATTGCAACAAATGTTGAATGTCCGTTTAGTGTAGAATCAAGTGAAGAAAGAGGACATGTGGGTGATAGAAACCCAACTCGGGATGATCAGTCGATGTGTTAG

mRNA sequence

ATGGATGTTGAGACGTTTGAGGAATCTGAGACAGATGTTAGTCCTCATTCTGAAAATCATATGCAATTGATAAACGATCATATATCGATTGCAACAAATGTTGAATGTCCGTTTAGTGTAGAATCAAGTGAAGAAAGAGGACATGTGGGTGATAGAAACCCAACTCGGGATGATCAGTCGATGTGTTAG

Coding sequence (CDS)

ATGGATGTTGAGACGTTTGAGGAATCTGAGACAGATGTTAGTCCTCATTCTGAAAATCATATGCAATTGATAAACGATCATATATCGATTGCAACAAATGTTGAATGTCCGTTTAGTGTAGAATCAAGTGAAGAAAGAGGACATGTGGGTGATAGAAACCCAACTCGGGATGATCAGTCGATGTGTTAG
Homology
[Close]
BLAST of CSPI04G06490.1 vs. TrEMBL
Match: A0A0A0KV41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052680 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.8e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS 60
          MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS
Sbjct: 1  MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS 60

Query: 61 MC 63
          MC
Sbjct: 61 MC 62

[Close]
BLAST of CSPI04G06490.1 vs. NCBI nr
Match: gi|700198260|gb|KGN53418.1| (hypothetical protein Csa_4G052680 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 9.8e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS 60
          MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS
Sbjct: 1  MDVETFEESETDVSPHSENHMQLINDHISIATNVECPFSVESSEERGHVGDRNPTRDDQS 60

Query: 61 MC 63
          MC
Sbjct: 61 MC 62

The following BLAST results are available for this feature:
BLAST of CSPI04G06490.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G06490.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV41_CUCSA6.8e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052680 PE=4 SV=1[more]
BLAST of CSPI04G06490.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G06490.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198260|gb|KGN53418.1|9.8e-28100.00hypothetical protein Csa_4G052680 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI04G06490CSPI04G06490gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI04G06490.1CSPI04G06490.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G06490.1.cds1CSPI04G06490.1.cds1CDS