CSPI04G02750 (gene) Wild cucumber (PI 183967)

NameCSPI04G02750
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransmembrane protein, putative
LocationChr4 : 1669672 .. 1670612 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAGAAAACAATACCCATTGATTCACACACGAACAAGATGAAGTTTCAACACTATGGGGCGTTTTGGTTTATCCAGCAAGAAGAAGAAAGTACCTGGAAATAGCCAATAGTCAAACCAACAGCCTCAGCATCAAGCAATTACAGTCCCAACTCCAAGCGCCATAGCAAGAACAAGACCAAGTAAAATTCAAAATTCCTTTGTCAACACGCAACCTACTCTCTCTACTTCTCTACTTCTCAACAACAACACCCATTCAAACACCAACCCTTTTTCATTTTACCTATAAATTAAGCTTCAACCCCCTTAGCCATTTCATCAAACACCTTCTCTTCATTTCACCCTTAACACCTCTCAGACATATCACCAAACACCTTCTCTTCATTTCACTGTTTTTTTTCTCCACGCTTTGTTTATCCTCAGTCATATCATCAAACACCTTCCTTTTCGTTCAACCTTTGCTTCTCTTAACCCCAATTTCTCTCAGACGCATCGTCCAACACATTACCTTCGTTCCAGATTCCACTTCAACCCAGAGACTTCTAAAATGAATTTCGGAAAATTAAGTGTCCTTTTGATCGTTCTTGTCGTCGCTTTGGCGTTGCTGAGCAACAGCTCCACCGTGGACGCTGCCAGAGTGGTGCCCGGAGACTTCGCGAGCGTCAATCACTTGGAGATGTACCCGTCGGCGTACGAGCAAGCGAAGCATACGGTGTCGTGTTGGCTTGGGCGGTTATCGTCCGGCCCCAGCCCCAAGGGTCCTGGGCACTGATTGCTCCCCCGCCGGGCCACCGTCCACCGAAACAGACCTTTGGCGAGGAGGCTCATTTTTTCCTTTTGTTAATTCTTTGATACGTACATGACACAGACTGGCCGAAGACCGTCTTGACCAAATCTATAGTTTGAAGAAATATTTTATTTCATTTTCTCTCTCTTTTTTTAC

mRNA sequence

ATGAATTTCGGAAAATTAAGTGTCCTTTTGATCGTTCTTGTCGTCGCTTTGGCGTTGCTGAGCAACAGCTCCACCGTGGACGCTGCCAGAGTGGTGCCCGGAGACTTCGCGAGCGTCAATCACTTGGAGATGTACCCGTCGGCGTACGAGCAAGCGAAGCATACGGTGTCGTGTTGGCTTGGGCGGTTATCGTCCGGCCCCAGCCCCAAGGGTCCTGGGCACTGA

Coding sequence (CDS)

ATGAATTTCGGAAAATTAAGTGTCCTTTTGATCGTTCTTGTCGTCGCTTTGGCGTTGCTGAGCAACAGCTCCACCGTGGACGCTGCCAGAGTGGTGCCCGGAGACTTCGCGAGCGTCAATCACTTGGAGATGTACCCGTCGGCGTACGAGCAAGCGAAGCATACGGTGTCGTGTTGGCTTGGGCGGTTATCGTCCGGCCCCAGCCCCAAGGGTCCTGGGCACTGA
BLAST of CSPI04G02750 vs. TrEMBL
Match: A0A0A0KU27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011070 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.2e-32
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60
          MNFGKLSVLLIVLVVAL LLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL
Sbjct: 1  MNFGKLSVLLIVLVVALTLLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60

Query: 61 GRLSSGPSPKGPGH 75
          GRLSSGPSPKGPGH
Sbjct: 61 GRLSSGPSPKGPGH 74

BLAST of CSPI04G02750 vs. TrEMBL
Match: A0A0D2UTQ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G137700 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-15
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60
          MN  KL+ LLI+ V+++A+LS+   V+A RV+  DFA  NHLE Y S YE+AK T+SCWL
Sbjct: 1  MNSRKLNTLLIIFVISMAILSHVG-VEATRVLAEDFAKANHLETYSSVYEKAKFTMSCWL 60

Query: 61 GRLSSGPSPKGPGH 75
           RL+SGPSP+GPGH
Sbjct: 61 ERLASGPSPRGPGH 73

BLAST of CSPI04G02750 vs. TrEMBL
Match: A0A067L755_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05738 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.1e-15
Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60
          M+F K ++LL++ ++ +A +S    V+A RV+P DFAS NHLE Y S YE+A+ T++CWL
Sbjct: 1  MSFKKATLLLVIFLIYMAFISQVQ-VEATRVLPEDFASANHLETYSSVYEKARSTMACWL 60

Query: 61 GRLSSGPSPKGPGH 75
          G+L+SGPSP+GPGH
Sbjct: 61 GKLASGPSPRGPGH 73

BLAST of CSPI04G02750 vs. TrEMBL
Match: M5XL61_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019653mg PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-13
Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSA-------YEQAK 60
          MNF K+S +LI+ ++++A+   S+ V+A+RV+  DFA  NHLE + S+       YE+AK
Sbjct: 1  MNFPKMSSILIIFMISVAIWVGSAPVEASRVLQEDFAGANHLETFSSSSLSSSSVYEKAK 60

Query: 61 HTVSCWLGRLSSGPSPKGPGH 75
           T+ CWL RL+SGPSPKGPGH
Sbjct: 61 FTMECWLERLASGPSPKGPGH 81

BLAST of CSPI04G02750 vs. TrEMBL
Match: A0A0D2NBJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G124500 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-13
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSA-YEQAKHTVSCW 60
          MN  K+S L I+LV++L +LS+   V+  RV+P DFA  NHL  Y S+ YE+AK T+SCW
Sbjct: 1  MNSRKVSTLFIILVISLPILSHVG-VEGTRVLPEDFAKANHLHTYSSSVYEKAKFTMSCW 60

Query: 61 LGRLSSGPSPKGPGH 75
          L RL+SGPSP+GPGH
Sbjct: 61 LQRLASGPSPRGPGH 74

BLAST of CSPI04G02750 vs. NCBI nr
Match: gi|700197850|gb|KGN53008.1| (hypothetical protein Csa_4G011070 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-32
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60
          MNFGKLSVLLIVLVVAL LLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL
Sbjct: 1  MNFGKLSVLLIVLVVALTLLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60

Query: 61 GRLSSGPSPKGPGH 75
          GRLSSGPSPKGPGH
Sbjct: 61 GRLSSGPSPKGPGH 74

BLAST of CSPI04G02750 vs. NCBI nr
Match: gi|763804763|gb|KJB71701.1| (hypothetical protein B456_011G137700 [Gossypium raimondii])

HSP 1 Score: 88.6 bits (218), Expect = 5.1e-15
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60
          MN  KL+ LLI+ V+++A+LS+   V+A RV+  DFA  NHLE Y S YE+AK T+SCWL
Sbjct: 1  MNSRKLNTLLIIFVISMAILSHVG-VEATRVLAEDFAKANHLETYSSVYEKAKFTMSCWL 60

Query: 61 GRLSSGPSPKGPGH 75
           RL+SGPSP+GPGH
Sbjct: 61 ERLASGPSPRGPGH 73

BLAST of CSPI04G02750 vs. NCBI nr
Match: gi|643738283|gb|KDP44271.1| (hypothetical protein JCGZ_05738 [Jatropha curcas])

HSP 1 Score: 87.8 bits (216), Expect = 8.7e-15
Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60
          M+F K ++LL++ ++ +A +S    V+A RV+P DFAS NHLE Y S YE+A+ T++CWL
Sbjct: 1  MSFKKATLLLVIFLIYMAFISQVQ-VEATRVLPEDFASANHLETYSSVYEKARSTMACWL 60

Query: 61 GRLSSGPSPKGPGH 75
          G+L+SGPSP+GPGH
Sbjct: 61 GKLASGPSPRGPGH 73

BLAST of CSPI04G02750 vs. NCBI nr
Match: gi|590654806|ref|XP_007033805.1| (Uncharacterized protein TCM_019918 [Theobroma cacao])

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-13
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60
          M+  KLS LLI+ V+++A LS+   V+A RV+P DFA  NHL+ Y S Y++AK T++ WL
Sbjct: 1  MDSRKLSTLLIIFVISMAALSHVG-VEATRVLPEDFAKTNHLDTYSSVYQKAKFTMAYWL 60

Query: 61 GRLSSGPSPKGPGH 75
           RL SGPSPKGPGH
Sbjct: 61 ERLDSGPSPKGPGH 73

BLAST of CSPI04G02750 vs. NCBI nr
Match: gi|596268222|ref|XP_007225052.1| (hypothetical protein PRUPE_ppa019653mg [Prunus persica])

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-13
Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 1

Query: 1  MNFGKLSVLLIVLVVALALLSNSSTVDAARVVPGDFASVNHLEMYPSA-------YEQAK 60
          MNF K+S +LI+ ++++A+   S+ V+A+RV+  DFA  NHLE + S+       YE+AK
Sbjct: 1  MNFPKMSSILIIFMISVAIWVGSAPVEASRVLQEDFAGANHLETFSSSSLSSSSVYEKAK 60

Query: 61 HTVSCWLGRLSSGPSPKGPGH 75
           T+ CWL RL+SGPSPKGPGH
Sbjct: 61 FTMECWLERLASGPSPKGPGH 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KU27_CUCSA3.2e-3298.65Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011070 PE=4 SV=1[more]
A0A0D2UTQ2_GOSRA3.6e-1559.46Uncharacterized protein OS=Gossypium raimondii GN=B456_011G137700 PE=4 SV=1[more]
A0A067L755_JATCU6.1e-1554.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05738 PE=4 SV=1[more]
M5XL61_PRUPE1.9e-1350.62Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019653mg PE=4 SV=1[more]
A0A0D2NBJ8_GOSRA1.9e-1357.33Uncharacterized protein OS=Gossypium raimondii GN=B456_005G124500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700197850|gb|KGN53008.1|4.6e-3298.65hypothetical protein Csa_4G011070 [Cucumis sativus][more]
gi|763804763|gb|KJB71701.1|5.1e-1559.46hypothetical protein B456_011G137700 [Gossypium raimondii][more]
gi|643738283|gb|KDP44271.1|8.7e-1554.05hypothetical protein JCGZ_05738 [Jatropha curcas][more]
gi|590654806|ref|XP_007033805.1|2.8e-1356.76Uncharacterized protein TCM_019918 [Theobroma cacao][more]
gi|596268222|ref|XP_007225052.1|2.8e-1350.62hypothetical protein PRUPE_ppa019653mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G02750.1CSPI04G02750.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37245FAMILY NOT NAMEDcoord: 1..74
score: 9.0
NoneNo IPR availablePANTHERPTHR37245:SF1SUBFAMILY NOT NAMEDcoord: 1..74
score: 9.0