CSPI04G01670 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G01670
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBAG family molecular chaperone regulator 5
LocationChr4 : 932542 .. 932865 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTGCTGTTTAGGTTGGAATATTCGGTGAAAGGCGTGGACTCTGGAATTAGGAATTTCAGGAAAGCGGTGATTAAGAAGGCTATTGCATTAGAGGAGAAGATCGATTCAATTGCTGCTGCGAATGAAGCTACTAATGTGATTGATGACTCTCGAACCCGTGACTGGAGCAGAAGCTGTTGATCCGAGTTCGGAAGGAACTCGGATCTCAAGGTTATAATTCCAGAGCACTTGGATGATAATTCTACTGCTGATAACGCTAATCCCGAATCTGCTGATGATTGTGATGGTGGGAATGCCGATATGGAGTTTCTAAGTTGA

mRNA sequence

ATGAATTTGCTGTTTAGGTTGGAATATTCGGTGAAAGGCGTGGACTCTGGAATTAGGAATTTCAGGAAAGCGGTGATTAAGAAGGCTATTGCATTAGAGGAGAAGATCGATTCAATTGCTGCTGCGAATGAAGCTACTAATGTGATTGATGACTCTCGAACCCAGCACTTGGATGATAATTCTACTGCTGATAACGCTAATCCCGAATCTGCTGATGATTGTGATGGTGGGAATGCCGATATGGAGTTTCTAAGTTGA

Coding sequence (CDS)

ATGAATTTGCTGTTTAGGTTGGAATATTCGGTGAAAGGCGTGGACTCTGGAATTAGGAATTTCAGGAAAGCGGTGATTAAGAAGGCTATTGCATTAGAGGAGAAGATCGATTCAATTGCTGCTGCGAATGAAGCTACTAATGTGATTGATGACTCTCGAACCCAGCACTTGGATGATAATTCTACTGCTGATAACGCTAATCCCGAATCTGCTGATGATTGTGATGGTGGGAATGCCGATATGGAGTTTCTAAGTTGA
Homology
[Close]
BLAST of CSPI04G01670 vs. TrEMBL
Match: A0A0A0KVI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006110 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-19
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDDSRTQ 56
          MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVID+SRT+
Sbjct: 1  MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDNSRTR 55

[Close]
BLAST of CSPI04G01670 vs. TrEMBL
Match: A0A0A0KTW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011820 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.1e-15
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 1 

Query: 1   MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDDSRTQHLDDN 60
           MNLLFRL+ SVKGVDSGIRN RKAVIKKAIAL+EKIDSIAAAN ATNVI ++  + +   
Sbjct: 116 MNLLFRLD-SVKGVDSGIRNLRKAVIKKAIALQEKIDSIAAANGATNVIYET-LEPVTAK 175

Query: 61  STADNANPESADDCDGGNAD 81
             ++  + ESAD+CDG NAD
Sbjct: 176 CDSEAVDRESADECDGENAD 193

[Close]
BLAST of CSPI04G01670 vs. TrEMBL
Match: W9QTU5_9ROSA (BAG family molecular chaperone regulator 5 OS=Morus notabilis GN=L484_017479 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-07
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 1 

Query: 1   MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVI--DDSRTQHLD 60
           MNLL RL+ SV+GVDSG+R+FRKAVIKKAIAL+E+ID+I A ++AT+ +  ++S ++  D
Sbjct: 116 MNLLLRLD-SVRGVDSGVRDFRKAVIKKAIALQERIDAIVAGDQATSDVANEESISKSAD 175

Query: 61  DNSTADNANPESADDCD 76
             +   ++   S  D D
Sbjct: 176 QAAETKDSGVSSGGDDD 191

[Close]
BLAST of CSPI04G01670 vs. TrEMBL
Match: B9GZD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16590g PE=4 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-06
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 1 

Query: 1   MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDDSRTQHLDDN 60
           M+LL +L+ SV+GVDSG+R+ RKAVIKKAIAL+E +DSIAAA    + +  +  + LD+ 
Sbjct: 108 MSLLLKLD-SVRGVDSGVRDCRKAVIKKAIALQETVDSIAAAANGDDSVVSAGEKGLDET 167

Query: 61  STADNAN---PESADDCDGGNADME 83
              +  N     +AD+   G A+ E
Sbjct: 168 GEGEEENGSVANAADELQNGAAESE 191

[Close]
BLAST of CSPI04G01670 vs. NCBI nr
Match: gi|700197746|gb|KGN52904.1| (hypothetical protein Csa_4G006110 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-18
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDDSRTQ 56
          MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVID+SRT+
Sbjct: 1  MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDNSRTR 55

[Close]
BLAST of CSPI04G01670 vs. NCBI nr
Match: gi|659108111|ref|XP_008454024.1| (PREDICTED: BAG family molecular chaperone regulator 6-like [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 4.8e-17
Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = 1 

Query: 1   MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDDSRTQHLDDN 60
           MNLLFRL+ SVKGVDSGIR+FRKAVIKKAIAL+EKIDSIAAANEATNVID++  + +   
Sbjct: 116 MNLLFRLD-SVKGVDSGIRSFRKAVIKKAIALQEKIDSIAAANEATNVIDET-LEPVTAE 175

Query: 61  STADNANPESADDCDGGNAD 81
              +  + ESADDCDG NAD
Sbjct: 176 CGCEGVDRESADDCDGENAD 193

[Close]
BLAST of CSPI04G01670 vs. NCBI nr
Match: gi|449468822|ref|XP_004152120.1| (PREDICTED: BAG family molecular chaperone regulator 6-like [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-14
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 1 

Query: 1   MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDDSRTQHLDDN 60
           MNLLFRL+ SVKGVDSGIRN RKAVIKKAIAL+EKIDSIAAAN ATNVI ++  + +   
Sbjct: 116 MNLLFRLD-SVKGVDSGIRNLRKAVIKKAIALQEKIDSIAAANGATNVIYET-LEPVTAK 175

Query: 61  STADNANPESADDCDGGNAD 81
             ++  + ESAD+CDG NAD
Sbjct: 176 CDSEAVDRESADECDGENAD 193

[Close]
BLAST of CSPI04G01670 vs. NCBI nr
Match: gi|700197877|gb|KGN53035.1| (hypothetical protein Csa_4G011820 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-14
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 1 

Query: 1   MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVIDDSRTQHLDDN 60
           MNLLFRL+ SVKGVDSGIRN RKAVIKKAIAL+EKIDSIAAAN ATNVI ++  + +   
Sbjct: 116 MNLLFRLD-SVKGVDSGIRNLRKAVIKKAIALQEKIDSIAAANGATNVIYET-LEPVTAK 175

Query: 61  STADNANPESADDCDGGNAD 81
             ++  + ESAD+CDG NAD
Sbjct: 176 CDSEAVDRESADECDGENAD 193

[Close]
BLAST of CSPI04G01670 vs. NCBI nr
Match: gi|703077757|ref|XP_010090673.1| (BAG family molecular chaperone regulator 5 [Morus notabilis])

HSP 1 Score: 62.0 bits (149), Expect = 5.9e-07
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 1 

Query: 1   MNLLFRLEYSVKGVDSGIRNFRKAVIKKAIALEEKIDSIAAANEATNVI--DDSRTQHLD 60
           MNLL RL+ SV+GVDSG+R+FRKAVIKKAIAL+E+ID+I A ++AT+ +  ++S ++  D
Sbjct: 116 MNLLLRLD-SVRGVDSGVRDFRKAVIKKAIALQERIDAIVAGDQATSDVANEESISKSAD 175

Query: 61  DNSTADNANPESADDCD 76
             +   ++   S  D D
Sbjct: 176 QAAETKDSGVSSGGDDD 191

The following BLAST results are available for this feature:
BLAST of CSPI04G01670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G01670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVI0_CUCSA7.9e-1996.36Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006110 PE=4 SV=1[more]
A0A0A0KTW1_CUCSA9.1e-1567.50Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011820 PE=4 SV=1[more]
W9QTU5_9ROSA4.1e-0749.35BAG family molecular chaperone regulator 5 OS=Morus notabilis GN=L484_017479 PE=... [more]
B9GZD2_POPTR4.5e-0644.71Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16590g PE=4 SV=2[more]
BLAST of CSPI04G01670 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G01670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197746|gb|KGN52904.1|1.1e-1896.36hypothetical protein Csa_4G006110 [Cucumis sativus][more]
gi|659108111|ref|XP_008454024.1|4.8e-1771.25PREDICTED: BAG family molecular chaperone regulator 6-like [Cucumis melo][more]
gi|449468822|ref|XP_004152120.1|1.3e-1467.50PREDICTED: BAG family molecular chaperone regulator 6-like [Cucumis sativus][more]
gi|700197877|gb|KGN53035.1|1.3e-1467.50hypothetical protein Csa_4G011820 [Cucumis sativus][more]
gi|703077757|ref|XP_010090673.1|5.9e-0749.35BAG family molecular chaperone regulator 5 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0051087 chaperone binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G01670.1CSPI04G01670.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33322FAMILY NOT NAMEDcoord: 1..46
score: 1.9
NoneNo IPR availablePANTHERPTHR33322:SF6SUBFAMILY NOT NAMEDcoord: 1..46
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G01670CsaV3_4G001660Cucumber (Chinese Long) v3cpicucB213
CSPI04G01670CsGy4G001560Cucumber (Gy14) v2cgybcpiB168
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G01670Silver-seed gourdcarcpiB0133
CSPI04G01670Silver-seed gourdcarcpiB0233
CSPI04G01670Cucumber (Chinese Long) v3cpicucB205
CSPI04G01670Cucumber (Chinese Long) v3cpicucB249
CSPI04G01670Watermelon (97103) v2cpiwmbB333
CSPI04G01670Watermelon (97103) v2cpiwmbB340
CSPI04G01670Watermelon (97103) v2cpiwmbB344
CSPI04G01670Wax gourdcpiwgoB368
CSPI04G01670Wax gourdcpiwgoB380
CSPI04G01670Wild cucumber (PI 183967)cpicpiB072
CSPI04G01670Wild cucumber (PI 183967)cpicpiB073
CSPI04G01670Cucurbita moschata (Rifu)cmocpiB250
CSPI04G01670Wild cucumber (PI 183967)cpicpiB172
CSPI04G01670Cucumber (Gy14) v1cgycpiB103
CSPI04G01670Cucumber (Gy14) v1cgycpiB125
CSPI04G01670Cucumber (Gy14) v1cgycpiB245
CSPI04G01670Cucurbita maxima (Rimu)cmacpiB263
CSPI04G01670Cucurbita maxima (Rimu)cmacpiB470
CSPI04G01670Cucurbita maxima (Rimu)cmacpiB812
CSPI04G01670Cucurbita moschata (Rifu)cmocpiB460
CSPI04G01670Cucumber (Chinese Long) v2cpicuB173
CSPI04G01670Cucumber (Chinese Long) v2cpicuB174
CSPI04G01670Cucumber (Chinese Long) v2cpicuB182
CSPI04G01670Melon (DHL92) v3.5.1cpimeB273
CSPI04G01670Melon (DHL92) v3.5.1cpimeB284
CSPI04G01670Melon (DHL92) v3.5.1cpimeB310
CSPI04G01670Watermelon (Charleston Gray)cpiwcgB291
CSPI04G01670Watermelon (Charleston Gray)cpiwcgB275
CSPI04G01670Watermelon (Charleston Gray)cpiwcgB343
CSPI04G01670Watermelon (Charleston Gray)cpiwcgB351
CSPI04G01670Watermelon (97103) v1cpiwmB286
CSPI04G01670Watermelon (97103) v1cpiwmB301
CSPI04G01670Watermelon (97103) v1cpiwmB307
CSPI04G01670Watermelon (97103) v1cpiwmB362
CSPI04G01670Cucurbita pepo (Zucchini)cpecpiB113
CSPI04G01670Cucurbita pepo (Zucchini)cpecpiB576
CSPI04G01670Cucurbita pepo (Zucchini)cpecpiB617
CSPI04G01670Bottle gourd (USVL1VR-Ls)cpilsiB268
CSPI04G01670Bottle gourd (USVL1VR-Ls)cpilsiB311
CSPI04G01670Bottle gourd (USVL1VR-Ls)cpilsiB317
CSPI04G01670Melon (DHL92) v3.6.1cpimedB271
CSPI04G01670Melon (DHL92) v3.6.1cpimedB279
CSPI04G01670Melon (DHL92) v3.6.1cpimedB301
CSPI04G01670Cucumber (Gy14) v2cgybcpiB325