CSPI03G22240 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G22240
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	ATP-dependent Clp protease proteolytic subunit
Location	Chr3 : 18668873 .. 18672248 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAATTTGGGGGAAAATACTCTTTATATTGGTAGAGCAGCCCAATCTTTGGATTTCTTGTGGGTGCTTCCCCTTCTGCTCTCAATAGCGAAAATGGAGTTGAGTTTCACACACGCACCTTCTCCTTCCCCTTATGGGCTTAAGCGTTCTGACCATGGATTTCAGTCTTCTCATTTTCCAATTTCTACTCCTTCCAAGCACTCCCATGGCGGCAATTTCACTTCTAATGCTTTTAGAATCAGAAATTGTTCGGTTCCGGTTGTAAACCACCCCTCGCATAGTTCCTCTTCTCTTAGACGCACCTTATCCAGTAATTGGGATGTTTTTAGCAACTATTCTGTATCTTCCGCTCGATCCTTGCCTCGATTCGAAGAGCTTGACACTACCAATATGCTTCTCCGCCAGCGAATCATCTTCTTGGGCTCTCAGGCAATGTCTCCAACTATTTCCTCGTATTTCTTAATCAATTGGTTTGTTTCTACTTTCAGCGGTGTGTTGAATTCTGTTTAGCTTTTTTTAGGTTTGATTTTGTATTTGTTATATTGGGATTTTTGTTTGGATGGTTTGGGAGTTGTTTGAGTTGGAAGAAGAAGAGAGAATTTTTATTGGGACTTGAATATTGTATTGGGTACTGGCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACAAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGTATTTTCCGTCATCAAGTCCTTACATTCTTTTTTGTTTTTGTTTTTGTTTTTTGTTTTCAGACGGATAATTTTTAGTTTTAATTTGAAGTTGTTGGGTTGAAAGGATGCTGTCGTATAATCTTTATGGTTCAAATCTGCTTCCCACAGTATTCACGCCCTTCATTCTTTTATGATGGTTTTAGTACTCCTTGTTGCTCCAAACTGCTTGTGCGTGAGAGTGTAAAGTAAGTTACATAATCCAATATTTGGTACGCAAATGAGTTCAAGTGCCTTCTGTGTTGATCACGTGCATCAAAATAAACACATTCCAAAGTTTGGAATCATTGAAATATTTGAGAAATGACTTCATTATTCTCACTTCGGAAGTAGCTTGGGATCTGTCATTCTAAGTCAGGATCATAATCCATCAAGTTGTGAGACAAGAGCTTCTGTTATTCTATCGAATTACATTTCATCTTATGGTATTTTAACCAAGTTATTCTATATATATAGACACAGAGAGAGATGGAGAGAAGGAAACAATACAAAAGCAGACTAAAAGCCAAGTACACAAAAACCTCACTAAAGAAAGGTGCTCCAACTCAGTAAAATGTTGCCTAATGAATAATTACAAAAAGTCTTTGAAATTGAAGCCCATGAAAAGAAAGAGCTCCAGCGAGTCATTACGTTTTAGCACTATGGTTGTAACTTTTTTGATCGATGAAAATTATATTATATGGTATGTAGTGTGGCAATCATGGGGCAAGATTCCGGATGATATGCATATAGCCTGATTCAAGTTCAATTCAAATGATAATCTGTAAAGTATTTTCTGATTAGGAGGTTGCACAAACAGATCTCTGGTGTGGGGTTTGTTTTTTTCATTCAACATAATAATGATATTATAAATTATTTTGCAACGGCCCTTAGTTTTCCTCCTGGTTTCCCTGTAATTCAGAAGATACTTCAGCAGATGAAGTCACCTACCCATCCATGCAATAACCTCTTTATTTCTCCTTACTGAAAACTGCCCTTCTTATGTTCGTTTATCTCTTGTGTGATGATCTCTCCCTTCAATTATTTCAAGGCAAATGGATCTTTGTATATCCACATCTTTTTGGTCTACCTCTATTGTTGTAGGTTGTTATTTCAATCCATGTTTGTTTCTCAAATTTTTTATTGAATGTAGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCCGATGTTTCAACCGTTTGTCTGGGACTTGCCGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTCAAAGGGAAAGCGATTTTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACTGCTGGAGGAAAAGTGAGTAGATTATTGTTCTGTGCTTTGCTGTTAAGTTAATGGCTTTTCCAGTCGCTCTTGAATGTGTGCAGCATTTCTAAAATTCTTTGTTCATAATGTTTAGTGCTTGCATTGGATGGTAGGGAGTTGAAAATCAATAAGCCTCATAATAGCTTTTATGAACTTGATTTATTTGCGTTGAATTTTTTGGTAAAGGGACACAGCTTTGGCTCCACAAATAAGAGCATGGAATGAAATTCAGGAGTTTTTCTGAAATTATCGATATTGGCTTTTGATCTATTTAATAATTAATTAGTTGATTTAAGCTTTCAATTATGGGAGAACGCCTAATCAATTCACTGGTTACCCCATCTATGCCAGGCAACAGAGATGAGCATTCGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCTAGAATCACTGGAAAGCCAATAGAGCAGGTTTGCCAATATATTACTTTAACTACTTGGTTCTCAATTTTGTAAAGAAACCCTTTAGTATTTGTTTGTCCTTTGCAGATTGAATTGGACACAGAACGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATCGATGATGGGAAGCCTGGACTTATTGCTCCAATTGCAGAGGCAACTCCTCCTCCGAAAACTCGAATCTGGGATCTATGGAAGGTTGAAGGGAGTCGAAAAGCCAAGAAGAATTTGCCTTCAGAAAGCAAGATTTTGAAGAATGGATATGAAGAAGGGGGTCAAGGAAGTGACAAAGAGCGCGGTGGCCAGCAGGAAACAGAAGAACCAAGTCCTGTATGACACAGGACTCACCCTGTTCCTCTTCTTCCATCCCTCTGCCTCTATTGTTGTATCCGAGCTTGTTCTTTCCATTCTCAAATAGTTGTTTCTCTGTAAGATCTTAAGACGATTATTACCAATTTGTTAAACAGGCCTAGGTTTCGGAAAATTCAAGGGTCGTAACATTCCCTTTCTCTTCCCTTATCTAGACGCTAAAATATTGCTGGAGTCTGATATTGAATTTGTCTAGAAACCTTGGCTCAACGTTCAATGGGGAGCACCAATGACCATGTTTCTGAGTAAGTTGCTGCAACTTGGATGGAAGTTTGTATGAGTTTTGGCTGAGATTTGGATTAAGATGGAAGGCAGGTGATAATTTTGAATTCAAGGTTGTCATGCAATGCATTGCTAAATATTCTACATGATAGTTGGGGTAATTGCCTTCTATCCAACGTTTATTATTGAAG

mRNA sequence

ATGGAGTTGAGTTTCACACACGCACCTTCTCCTTCCCCTTATGGGCTTAAGCGTTCTGACCATGGATTTCAGTCTTCTCATTTTCCAATTTCTACTCCTTCCAAGCACTCCCATGGCGGCAATTTCACTTCTAATGCTTTTAGAATCAGAAATTGTTCGGTTCCGGTTGTAAACCACCCCTCGCATAGTTCCTCTTCTCTTAGACGCACCTTATCCAGTAATTGGGATGTTTTTAGCAACTATTCTGTATCTTCCGCTCGATCCTTGCCTCGATTCGAAGAGCTTGACACTACCAATATGCTTCTCCGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACAAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCCGATGTTTCAACCGTTTGTCTGGGACTTGCCGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTCAAAGGGAAAGCGATTTTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACTGCTGGAGGAAAAGCAACAGAGATGAGCATTCGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCTAGAATCACTGGAAAGCCAATAGAGCAGATTGAATTGGACACAGAACGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATCGATGATGGGAAGCCTGGACTTATTGCTCCAATTGCAGAGGCAACTCCTCCTCCGAAAACTCGAATCTGGGATCTATGGAAGGTTGAAGGGAGTCGAAAAGCCAAGAAGAATTTGCCTTCAGAAAGCAAGATTTTGAAGAATGGATATGAAGAAGGGGGTCAAGGAAGTGACAAAGAGCGCGGTGGCCAGCAGGAAACAGAAGAACCAAGTCCTGTATGA

Coding sequence (CDS)

ATGGAGTTGAGTTTCACACACGCACCTTCTCCTTCCCCTTATGGGCTTAAGCGTTCTGACCATGGATTTCAGTCTTCTCATTTTCCAATTTCTACTCCTTCCAAGCACTCCCATGGCGGCAATTTCACTTCTAATGCTTTTAGAATCAGAAATTGTTCGGTTCCGGTTGTAAACCACCCCTCGCATAGTTCCTCTTCTCTTAGACGCACCTTATCCAGTAATTGGGATGTTTTTAGCAACTATTCTGTATCTTCCGCTCGATCCTTGCCTCGATTCGAAGAGCTTGACACTACCAATATGCTTCTCCGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACAAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCCGATGTTTCAACCGTTTGTCTGGGACTTGCCGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTCAAAGGGAAAGCGATTTTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACTGCTGGAGGAAAAGCAACAGAGATGAGCATTCGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCTAGAATCACTGGAAAGCCAATAGAGCAGATTGAATTGGACACAGAACGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATCGATGATGGGAAGCCTGGACTTATTGCTCCAATTGCAGAGGCAACTCCTCCTCCGAAAACTCGAATCTGGGATCTATGGAAGGTTGAAGGGAGTCGAAAAGCCAAGAAGAATTTGCCTTCAGAAAGCAAGATTTTGAAGAATGGATATGAAGAAGGGGGTCAAGGAAGTGACAAAGAGCGCGGTGGCCAGCAGGAAACAGAAGAACCAAGTCCTGTATGA

Homology

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BLAST of CSPI03G22240 vs. Swiss-Prot
Match: CLPP3_ARATH (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.3e-115
Identity = 213/279 (76.34%), Postives = 235/279 (84.23%), Query Frame = 1


Query: 47  FRIRNCSVPVVNHPSHSSSSL------RRTLSSNWDV--FSNYSVSSARS-LPRFEELDT 106
           F IRN  +P  + P    SS+      R+TLSSNWDV  FS  SV+ + S LP FEELDT
Sbjct: 27  FPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDT 86

Query: 107 TNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDA 166
           TNMLLRQRI+FLGSQVDDMTAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDA
Sbjct: 87  TNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDA 146

Query: 167 MKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRI 226
           MK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMIHQPLGTAGGKATEMSIRI
Sbjct: 147 MKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRI 206

Query: 227 REMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAP 286
           REM YHKIKLNKIFSRITGKP  +IE DT+RDNF+NPWEAKEYGLID VIDDGKPGLIAP
Sbjct: 207 REMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAP 266

Query: 287 IAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGY 317
           I + TPPPKT++WDLWKVEG++K   NLPSE  + +NGY
Sbjct: 267 IGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

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BLAST of CSPI03G22240 vs. Swiss-Prot
Match: CLPP1_NOSS1 (ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.6e-58
Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 1


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LLR+RI+FLG QVD   A+ I++QLLFLDAEDP KDI L+INSPGGSVTAGMGI+
Sbjct: 18  DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ R+MIHQPLG A G+AT++ I
Sbjct: 78  DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVID 269
           + RE+ YHK +LN   +  TG+PIE+I  DTERD FM+P EAK+YGLID+VID
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVID 190

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BLAST of CSPI03G22240 vs. Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-57
Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 1


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LLR+RIIFLG QVD   A+ I++QLLFLDAEDP KDI L+INSPGGSVTAGMGI+
Sbjct: 18  DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ R+MIHQPLG A G+AT++ I
Sbjct: 78  DTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVID 269
           + RE+ YHK +LN   +  TG+PIE+I  DTERD FM+P EA++YGLID+VID
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVID 190

[Close]

BLAST of CSPI03G22240 vs. Swiss-Prot
Match: CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.4e-56
Identity = 105/172 (61.05%), Postives = 139/172 (80.81%), Query Frame = 1


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L+INSPGGSVTAGM IY
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ R+MIHQPLG A G+A ++ I
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVI 268
           + RE+ YHK  LN + ++ TG+P+E+IE+DT+RD FM+P EAK YGLID+V+
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

[Close]

BLAST of CSPI03G22240 vs. Swiss-Prot
Match: CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.4e-56
Identity = 105/172 (61.05%), Postives = 139/172 (80.81%), Query Frame = 1


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L+INSPGGSVTAGM IY
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ R+MIHQPLG A G+A ++ I
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVI 268
           + RE+ YHK  LN + ++ TG+P+E+IE+DT+RD FM+P EAK YGLID+V+
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

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BLAST of CSPI03G22240 vs. TrEMBL
Match: A0A0A0LA84_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G363170 PE=3 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 8.1e-192
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1


Query: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60
           MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP
Sbjct: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60

Query: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120
           SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF
Sbjct: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120

Query: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180
           IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL
Sbjct: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180

Query: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240
           LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE
Sbjct: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240

Query: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300
           QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK
Sbjct: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300

Query: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV
Sbjct: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339

[Close]

BLAST of CSPI03G22240 vs. TrEMBL
Match: A0A059ADE6_EUCGR (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus grandis GN=EUGRSUZ_J01541 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 7.0e-127
Identity = 238/298 (79.87%), Postives = 259/298 (86.91%), Query Frame = 1


Query: 48  RIRNCSVPVVNHPSHSSSSLRRTLSSNWDV-----FSNYSVS-SARSLPRFEELDTTNML 107
           R R C+V      S S S+ RRTLSS+WDV     FS  SVS +A  LPRFEELDTTNML
Sbjct: 34  RSRRCAVVRAVQGSSSLSAARRTLSSSWDVSGAGGFSISSVSPTAPRLPRFEELDTTNML 93

Query: 108 LRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLC 167
           LRQRIIFLGSQVDD+TADF+ISQLLFLDAEDPTKDI LFINSPGGSVTAGMGIYDAMKLC
Sbjct: 94  LRQRIIFLGSQVDDVTADFVISQLLFLDAEDPTKDINLFINSPGGSVTAGMGIYDAMKLC 153

Query: 168 KADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMA 227
           KADVST+CLGLAASMGAFLLASGSKGKRFCMPN RVMIHQPLGTAGGKAT+M IRIREM 
Sbjct: 154 KADVSTICLGLAASMGAFLLASGSKGKRFCMPNARVMIHQPLGTAGGKATDMGIRIREMV 213

Query: 228 YHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA 287
           YHKIKLNKI SRITGKP EQ+ELDT+RDNFMN WEAKEYGL+D VIDDGKPGLIAPIA++
Sbjct: 214 YHKIKLNKILSRITGKPEEQVELDTDRDNFMNAWEAKEYGLVDGVIDDGKPGLIAPIADS 273

Query: 288 TPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
            PPPKTR+WD WK+EGSRKA+KNLPSE KIL+NG+  GGQG+D +RG  QE E P+PV
Sbjct: 274 APPPKTRVWDQWKIEGSRKARKNLPSEHKILENGF-TGGQGNDDDRGTVQENEAPTPV 330

[Close]

BLAST of CSPI03G22240 vs. TrEMBL
Match: B9T322_RICCO (ATP-dependent Clp protease proteolytic subunit OS=Ricinus communis GN=RCOM_0326970 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 2.3e-125
Identity = 232/312 (74.36%), Postives = 266/312 (85.26%), Query Frame = 1


Query: 30  ISTPSKHSHGGNFTSNAFRIRNCSVPVVNHPSHSSSSLRRTLSSNWDV--FSNYSVSSAR 89
           I+T   +    + ++N  R +  SV  VN       + + TLSSNWDV  FS+   +S+ 
Sbjct: 31  INTTDSNKAKVSISTNGKRRKPISVKAVN-------TRKETLSSNWDVANFSSSFATSSP 90

Query: 90  SLPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGS 149
           +LPRFEELDTTNMLLRQRIIFLGSQVDDMTADF+ISQLLFLDAEDPTKDIKLFINSPGGS
Sbjct: 91  ALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFVISQLLFLDAEDPTKDIKLFINSPGGS 150

Query: 150 VTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAG 209
           VTAG+GIYDAMKLCKADVST+CLGLAASMGAFLLA+G+KGKRFCMPNGRVMIHQPLGTAG
Sbjct: 151 VTAGLGIYDAMKLCKADVSTICLGLAASMGAFLLAAGTKGKRFCMPNGRVMIHQPLGTAG 210

Query: 210 GKATEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVI 269
           GKATEMSIRIREM YHKIKLNKI SR TGKP+EQIE+DT+RDNFM+ WEAKEYGLID VI
Sbjct: 211 GKATEMSIRIREMNYHKIKLNKILSRATGKPVEQIEVDTDRDNFMSAWEAKEYGLIDVVI 270

Query: 270 DDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKER 329
           DDGKPGL+AP+ +A+PPPKTR+WDLWK+EG +KAKKNLPSE KIL+NGY  G QG D++R
Sbjct: 271 DDGKPGLVAPLTDASPPPKTRVWDLWKIEGGKKAKKNLPSEHKILRNGY-AGRQGDDEDR 330

Query: 330 GGQQETEEPSPV 340
           G  QE ++P+ V
Sbjct: 331 GTDQEKDDPASV 334

[Close]

BLAST of CSPI03G22240 vs. TrEMBL
Match: B9H362_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=POPTR_0004s09110g PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.3e-124
Identity = 224/281 (79.72%), Postives = 258/281 (91.81%), Query Frame = 1


Query: 61  SHSSSSLRRTLSSNWDV--FSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTA 120
           S  +++ R+TL+SNWDV  FS+++ +SA +LP+FEELDTTNMLLRQRIIFLGSQVDD+TA
Sbjct: 62  SFDANTARQTLASNWDVEKFSSFA-NSAPTLPKFEELDTTNMLLRQRIIFLGSQVDDVTA 121

Query: 121 DFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGA 180
           DFIISQLLFLDAEDP KDIKLFINSPGGSVTAG+GIYDAMKLCKADVST+CLGLAASMGA
Sbjct: 122 DFIISQLLFLDAEDPKKDIKLFINSPGGSVTAGLGIYDAMKLCKADVSTICLGLAASMGA 181

Query: 181 FLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP 240
           FLL++GSKGKRFCMPNGRVMIHQPLGTAGGKA+EMSIRIREM+YHKIKLNKI SRITGKP
Sbjct: 182 FLLSAGSKGKRFCMPNGRVMIHQPLGTAGGKASEMSIRIREMSYHKIKLNKILSRITGKP 241

Query: 241 IEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGS 300
           +EQ+E+DT+RDNFMN WEAKEYGL+DEVIDDGKPGL+AP+ +A+PPPKTR+WDLWK+EGS
Sbjct: 242 LEQVEVDTDRDNFMNAWEAKEYGLVDEVIDDGKPGLVAPLTDASPPPKTRVWDLWKIEGS 301

Query: 301 RKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           +KAK NLPSE K+L+NGY  GG G   +RG  +E E PSPV
Sbjct: 302 KKAKNNLPSEHKMLQNGYVGGGDG---DRGVDREKETPSPV 338

[Close]

BLAST of CSPI03G22240 vs. TrEMBL
Match: A0A067JRQ3_JATCU (ATP-dependent Clp protease proteolytic subunit OS=Jatropha curcas GN=JCGZ_02507 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 3.6e-123
Identity = 236/320 (73.75%), Postives = 267/320 (83.44%), Query Frame = 1


Query: 19  SDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHPSHSSSSLRRTLSSNWDVF 78
           S+H F    F +  PS  +  G     + R  + SV  +N     +S  R TLSSNWDV 
Sbjct: 20  SNHSFIHKQFLL--PSSTTTDGKAAIISKRRESISVKALN-----TSIRRATLSSNWDVT 79

Query: 79  SNYS-VSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDI 138
           +  S  SSA +LPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDI
Sbjct: 80  NLSSFASSAPTLPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDI 139

Query: 139 KLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRV 198
           KLFINSPGGSVTAG+GIYDAMKLCKADVST+CLGLAASMGAFLLA+G+KGKRFCMPNGRV
Sbjct: 140 KLFINSPGGSVTAGLGIYDAMKLCKADVSTICLGLAASMGAFLLAAGTKGKRFCMPNGRV 199

Query: 199 MIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEA 258
           MIHQPLGTAGGKATEMSIRIREM YHKIKLNKI SR TGKP+EQIE+DT+RDNFM+ W+A
Sbjct: 200 MIHQPLGTAGGKATEMSIRIREMNYHKIKLNKIMSRATGKPVEQIEVDTDRDNFMDAWQA 259

Query: 259 KEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYE 318
           KEYGL+D VIDDGKPGL+AP+A+A+PPPKTR+W+ WKVEGS+KA+KNLPSE KIL+NGY 
Sbjct: 260 KEYGLVDAVIDDGKPGLVAPLADASPPPKTRVWEFWKVEGSKKARKNLPSEHKILENGYL 319

Query: 319 EGGQGSDKERGGQQETEEPS 338
              QG D++RG   E EEP+
Sbjct: 320 R-VQGDDEDRGTNPEKEEPA 331

[Close]

BLAST of CSPI03G22240 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3)

HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-116
Identity = 213/279 (76.34%), Postives = 235/279 (84.23%), Query Frame = 1


Query: 47  FRIRNCSVPVVNHPSHSSSSL------RRTLSSNWDV--FSNYSVSSARS-LPRFEELDT 106
           F IRN  +P  + P    SS+      R+TLSSNWDV  FS  SV+ + S LP FEELDT
Sbjct: 27  FPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDT 86

Query: 107 TNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDA 166
           TNMLLRQRI+FLGSQVDDMTAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDA
Sbjct: 87  TNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDA 146

Query: 167 MKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRI 226
           MK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMIHQPLGTAGGKATEMSIRI
Sbjct: 147 MKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRI 206

Query: 227 REMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAP 286
           REM YHKIKLNKIFSRITGKP  +IE DT+RDNF+NPWEAKEYGLID VIDDGKPGLIAP
Sbjct: 207 REMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAP 266

Query: 287 IAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGY 317
           I + TPPPKT++WDLWKVEG++K   NLPSE  + +NGY
Sbjct: 267 IGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]

BLAST of CSPI03G22240 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 204.9 bits (520), Expect = 7.8e-53
Identity = 110/228 (48.25%), Postives = 152/228 (66.67%), Query Frame = 1


Query: 60  PSHSSSSLRRTLSSNWDVFSNYSVSSAR---SLPRFEELDTTNMLLRQRIIFLGSQVDDM 119
           P+   S   RT S +   F+N S+  ++   S  R  E D   +LLR+RI+FLGS +DD 
Sbjct: 40  PTKLISPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDF 99

Query: 120 TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 179
            AD I+SQLL LDA+DP KDIKLFINSPGGS++A M IYD ++L +ADVST+ LG+AAS 
Sbjct: 100 VADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAAST 159

Query: 180 GAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITG 239
            + +L +G+KGKRF MPN R+MIHQPLG A G+A ++ I+ +E+ ++K  +  I +  T 
Sbjct: 160 ASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTS 219

Query: 240 KPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPP 285
           +  EQ+  D +RD +M+P EA EYGLID VID      + P+ +   P
Sbjct: 220 RSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKP 267

[Close]

BLAST of CSPI03G22240 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5)

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-51
Identity = 101/177 (57.06%), Postives = 132/177 (74.58%), Query Frame = 1


Query: 91  RFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTA 150
           RF+ +   + L + RII  G  VDD  A+ I++QLL+LDA DPTKDI +++NSPGGSVTA
Sbjct: 111 RFQSI--ISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTA 170

Query: 151 GMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKA 210
           GM I+D M+  + DVSTVC+GLAASMGAFLL++G+KGKR+ +PN R+MIHQPLG A G  
Sbjct: 171 GMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ 230

Query: 211 TEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVI 268
           T++ I+  EM +HK  LN   +  TG+ +E+I  DT+RD FM+  EAKEYGLID VI
Sbjct: 231 TDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of CSPI03G22240 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-41
Identity = 77/174 (44.25%), Postives = 127/174 (72.99%), Query Frame = 1


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LL++RII +   ++D T+  +++QLL+L++E+P+K I +++NSPGG VTAG+ IY
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D M+  ++ +ST+CLG AASM + LLA+G+KG+R  +PN  VMIHQP G   G+A +++I
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDD 270
             +++      LN+++ + TG+P++ +  + +RD+FM P EAK +G+IDEVID+
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221

[Close]

BLAST of CSPI03G22240 vs. TAIR10
Match: AT1G11750.2 (AT1G11750.2 CLP protease proteolytic subunit 6)

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-36
Identity = 74/174 (42.53%), Postives = 112/174 (64.37%), Query Frame = 1


Query: 95  LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGI 154
           LD +++L R RIIF+G  ++   A  +ISQL+ L + D   DI +++N PGGS  + + I
Sbjct: 113 LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAI 172

Query: 155 YDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMS 214
           YD M   K  V TV  G+AAS GA LLA G KG R+ MPN RVMIHQP    GG   ++ 
Sbjct: 173 YDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVR 232

Query: 215 IRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVID 269
            ++ E    + K++++++  TG+P+E+++  TERD F++  EA E+GLID +++
Sbjct: 233 RQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLE 286

[Close]

BLAST of CSPI03G22240 vs. NCBI nr
Match: gi|778680955|ref|XP_011651427.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 677.6 bits (1747), Expect = 1.2e-191
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1


Query: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60
           MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP
Sbjct: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60

Query: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120
           SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF
Sbjct: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120

Query: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180
           IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL
Sbjct: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180

Query: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240
           LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE
Sbjct: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240

Query: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300
           QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK
Sbjct: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300

Query: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV
Sbjct: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339

[Close]

BLAST of CSPI03G22240 vs. NCBI nr
Match: gi|659114541|ref|XP_008457103.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo])

HSP 1 Score: 627.9 bits (1618), Expect = 1.1e-176
Identity = 317/340 (93.24%), Postives = 326/340 (95.88%), Query Frame = 1


Query: 1   MELSFTHAPSPSPYGLKRSDHGFQ-SSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNH 60
           MELSFTHAPSPSPYGLKR DHG   SSH PISTPS HSHG NFTSN FRIRNCSVPV+NH
Sbjct: 1   MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNH 60

Query: 61  PSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           PS SSSSLRRTLSSNWDV SNYS SSA SLPRFEELDTTNMLLRQRIIFLGSQVDD+TAD
Sbjct: 61  PSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAF 180

Query: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPI 240
           LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+
Sbjct: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL 240

Query: 241 EQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSR 300
           EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR 300

Query: 301 KAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           KAKKNLPSESKILKNGY +GG+GSD+ERG QQETEEPSPV
Sbjct: 301 KAKKNLPSESKILKNGY-QGGEGSDEERGSQQETEEPSPV 339

[Close]

BLAST of CSPI03G22240 vs. NCBI nr
Match: gi|702478906|ref|XP_010032665.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Eucalyptus grandis])

HSP 1 Score: 461.8 bits (1187), Expect = 1.0e-126
Identity = 238/298 (79.87%), Postives = 259/298 (86.91%), Query Frame = 1


Query: 48  RIRNCSVPVVNHPSHSSSSLRRTLSSNWDV-----FSNYSVS-SARSLPRFEELDTTNML 107
           R R C+V      S S S+ RRTLSS+WDV     FS  SVS +A  LPRFEELDTTNML
Sbjct: 34  RSRRCAVVRAVQGSSSLSAARRTLSSSWDVSGAGGFSISSVSPTAPRLPRFEELDTTNML 93

Query: 108 LRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLC 167
           LRQRIIFLGSQVDD+TADF+ISQLLFLDAEDPTKDI LFINSPGGSVTAGMGIYDAMKLC
Sbjct: 94  LRQRIIFLGSQVDDVTADFVISQLLFLDAEDPTKDINLFINSPGGSVTAGMGIYDAMKLC 153

Query: 168 KADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMA 227
           KADVST+CLGLAASMGAFLLASGSKGKRFCMPN RVMIHQPLGTAGGKAT+M IRIREM 
Sbjct: 154 KADVSTICLGLAASMGAFLLASGSKGKRFCMPNARVMIHQPLGTAGGKATDMGIRIREMV 213

Query: 228 YHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA 287
           YHKIKLNKI SRITGKP EQ+ELDT+RDNFMN WEAKEYGL+D VIDDGKPGLIAPIA++
Sbjct: 214 YHKIKLNKILSRITGKPEEQVELDTDRDNFMNAWEAKEYGLVDGVIDDGKPGLIAPIADS 273

Query: 288 TPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
            PPPKTR+WD WK+EGSRKA+KNLPSE KIL+NG+  GGQG+D +RG  QE E P+PV
Sbjct: 274 APPPKTRVWDQWKIEGSRKARKNLPSEHKILENGF-TGGQGNDDDRGTVQENEAPTPV 330

[Close]

BLAST of CSPI03G22240 vs. NCBI nr
Match: gi|255583777|ref|XP_002532641.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Ricinus communis])

HSP 1 Score: 456.8 bits (1174), Expect = 3.2e-125
Identity = 232/312 (74.36%), Postives = 266/312 (85.26%), Query Frame = 1


Query: 30  ISTPSKHSHGGNFTSNAFRIRNCSVPVVNHPSHSSSSLRRTLSSNWDV--FSNYSVSSAR 89
           I+T   +    + ++N  R +  SV  VN       + + TLSSNWDV  FS+   +S+ 
Sbjct: 31  INTTDSNKAKVSISTNGKRRKPISVKAVN-------TRKETLSSNWDVANFSSSFATSSP 90

Query: 90  SLPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGS 149
           +LPRFEELDTTNMLLRQRIIFLGSQVDDMTADF+ISQLLFLDAEDPTKDIKLFINSPGGS
Sbjct: 91  ALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFVISQLLFLDAEDPTKDIKLFINSPGGS 150

Query: 150 VTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAG 209
           VTAG+GIYDAMKLCKADVST+CLGLAASMGAFLLA+G+KGKRFCMPNGRVMIHQPLGTAG
Sbjct: 151 VTAGLGIYDAMKLCKADVSTICLGLAASMGAFLLAAGTKGKRFCMPNGRVMIHQPLGTAG 210

Query: 210 GKATEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVI 269
           GKATEMSIRIREM YHKIKLNKI SR TGKP+EQIE+DT+RDNFM+ WEAKEYGLID VI
Sbjct: 211 GKATEMSIRIREMNYHKIKLNKILSRATGKPVEQIEVDTDRDNFMSAWEAKEYGLIDVVI 270

Query: 270 DDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKER 329
           DDGKPGL+AP+ +A+PPPKTR+WDLWK+EG +KAKKNLPSE KIL+NGY  G QG D++R
Sbjct: 271 DDGKPGLVAPLTDASPPPKTRVWDLWKIEGGKKAKKNLPSEHKILRNGY-AGRQGDDEDR 330

Query: 330 GGQQETEEPSPV 340
           G  QE ++P+ V
Sbjct: 331 GTDQEKDDPASV 334

[Close]

BLAST of CSPI03G22240 vs. NCBI nr
Match: gi|224079413|ref|XP_002305856.1| (hypothetical protein POPTR_0004s09110g [Populus trichocarpa])

HSP 1 Score: 453.0 bits (1164), Expect = 4.7e-124
Identity = 224/281 (79.72%), Postives = 258/281 (91.81%), Query Frame = 1


Query: 61  SHSSSSLRRTLSSNWDV--FSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTA 120
           S  +++ R+TL+SNWDV  FS+++ +SA +LP+FEELDTTNMLLRQRIIFLGSQVDD+TA
Sbjct: 62  SFDANTARQTLASNWDVEKFSSFA-NSAPTLPKFEELDTTNMLLRQRIIFLGSQVDDVTA 121

Query: 121 DFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGA 180
           DFIISQLLFLDAEDP KDIKLFINSPGGSVTAG+GIYDAMKLCKADVST+CLGLAASMGA
Sbjct: 122 DFIISQLLFLDAEDPKKDIKLFINSPGGSVTAGLGIYDAMKLCKADVSTICLGLAASMGA 181

Query: 181 FLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP 240
           FLL++GSKGKRFCMPNGRVMIHQPLGTAGGKA+EMSIRIREM+YHKIKLNKI SRITGKP
Sbjct: 182 FLLSAGSKGKRFCMPNGRVMIHQPLGTAGGKASEMSIRIREMSYHKIKLNKILSRITGKP 241

Query: 241 IEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGS 300
           +EQ+E+DT+RDNFMN WEAKEYGL+DEVIDDGKPGL+AP+ +A+PPPKTR+WDLWK+EGS
Sbjct: 242 LEQVEVDTDRDNFMNAWEAKEYGLVDEVIDDGKPGLVAPLTDASPPPKTRVWDLWKIEGS 301

Query: 301 RKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           +KAK NLPSE K+L+NGY  GG G   +RG  +E E PSPV
Sbjct: 302 KKAKNNLPSEHKMLQNGYVGGGDG---DRGVDREKETPSPV 338

The following BLAST results are available for this feature:

BLAST of CSPI03G22240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CLPP3_ARATH	2.3e-115	76.34	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis t...	[more]
CLPP1_NOSS1	7.6e-58	64.16	ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
CLPP1_ANAVT	1.3e-57	64.16	ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ...	[more]
CLPP2_SYNE7	2.4e-56	61.05	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str...	[more]
CLPP3_SYNP6	2.4e-56	61.05	ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain AT...	[more]

BLAST of CSPI03G22240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA84_CUCSA	8.1e-192	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G36317...	[more]
A0A059ADE6_EUCGR	7.0e-127	79.87	ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus grandis GN=EUGRSUZ_...	[more]
B9T322_RICCO	2.3e-125	74.36	ATP-dependent Clp protease proteolytic subunit OS=Ricinus communis GN=RCOM_03269...	[more]
B9H362_POPTR	3.3e-124	79.72	ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=POPTR_0...	[more]
A0A067JRQ3_JATCU	3.6e-123	73.75	ATP-dependent Clp protease proteolytic subunit OS=Jatropha curcas GN=JCGZ_02507 ...	[more]

BLAST of CSPI03G22240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66670.1	1.3e-116	76.34	CLP protease proteolytic subunit 3	[more]
AT5G45390.1	7.8e-53	48.25	CLP protease P4	[more]
AT1G02560.1	2.5e-51	57.06	nuclear encoded CLP protease 5	[more]
AT5G23140.1	1.1e-41	44.25	nuclear-encoded CLP protease P7	[more]
AT1G11750.2	3.0e-36	42.53	CLP protease proteolytic subunit 6	[more]

BLAST of CSPI03G22240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680955\|ref\|XP_011651427.1\|	1.2e-191	100.00	PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucu...	[more]
gi\|659114541\|ref\|XP_008457103.1\|	1.1e-176	93.24	PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucu...	[more]
gi\|702478906\|ref\|XP_010032665.1\|	1.0e-126	79.87	PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Euca...	[more]
gi\|255583777\|ref\|XP_002532641.1\|	3.2e-125	74.36	PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Rici...	[more]
gi\|224079413\|ref\|XP_002305856.1\|	4.7e-124	79.72	hypothetical protein POPTR_0004s09110g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001907	ClpP
IPR018215	ClpP_Ser_AS
IPR023562	ClpP/TepA

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G22240.1	CSPI03G22240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 96..111 score: 6.4E-47coord: 167..184 score: 6.4E-47coord: 245..264 score: 6.4E-47coord: 188..207 score: 6.4E-47coord: 136..156 score: 6.4
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 53..270 score: 37
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 167..178 scor
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 61..325 score: 1.1E
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 95..268 score: 3.0
None	No IPR available	PANTHER	PTHR10381:SF20	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 3, CHLOROPLASTIC	coord: 61..325 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G22240	Csa3G363170	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G22240	CsaV3_3G021700	Cucumber (Chinese Long) v3	cpicucB153
CSPI03G22240	Cucsa.012750	Cucumber (Gy14) v1	cgycpiB300
CSPI03G22240	CsGy3G021100	Cucumber (Gy14) v2	cgybcpiB119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G22240	Watermelon (97103) v1	cpiwmB218
CSPI03G22240	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G22240	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G22240	Cucumber (Gy14) v1	cgycpiB299