CSPI03G22030 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G22030
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Kinetochore protein ndc80, putative
Location	Chr3 : 18466670 .. 18468979 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTGACTATAAGACAACCATTAAGCCTGCACTTGATTCCTTTGCAGAGGACATAAGGAGAAGTTCCATGATGAAGTTGGAAGAGTTGATTTCTCTCCGGCAGCAATCAAATGAAAATACTGCTAAAATTGAGTCTAAACGCAGTCACATGGCTTCTCTTCAACCCCATATCAATGAAGTAAGGACATGAAAAAATAAATGAGGGGTTTGCATGGCTGGTAGGAATTAACTCGTACAAGATGTTTTTCTGATCGTTTAAATGGTTTCTTTCTTCCAGCATGAAACACAACTAATCTCCTTAAAAGATGAAATGAGAGATTATATTTTAAGATGCTCCACGGAATCTAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAGGAGAAGCAGAGGAGAGTTTGAAGGTATTAATGCTTTACCACAATTATTCCCTTTATTTATTATTGTTATTATTATTATTATTTTTGGGTGGGGGGAGTTGACCCCTTTTTTCCCTTTCTTTTGGTAACCCTGATGATCAGTTGGCTTTGCAGAGGACTATTATTTCTGTGGGTAAATAACACTGTTAGCCCTTGAATTTCAAAATTAGTTTCTATTTGATCCCTTACTGATATTTTTAGTCCTATGCCTTTAAGAAATGGTACTTAACTTAGTTGACTATTTGATTGATGATTTGGCAGGTAATATAATTTTTCAAATGAGTTGGAATTGTTTTAGCTTATGTGACATTTCTCTTTATTTCCCTACCCTTCTGACATTTGCTTCTTCTCCTTTTATCTGAGTGCAAAAAATTCATTCACCTTCTTTCATTAAGAAGTACACTTTGTCTTTGCCCATACCTCTCACTCTTTCTTCTCCCAAAGCTTTCAACCAACAACACTTCATATAAGAAAATAAGTTATAAAACTCCAAACATTACACGCCTAAGATTTGTGCGAGTGAGGAAAGGATACATGCACACGAGTGTGACTTTTAAGAGTTGAAGAATCCATGTGCGAGAGAGACATACAAAGTTGAGATAAATTTAAGAGTTGAGTGTGATGGCGATAAATGAGGAAGTCAAGTGTGACTTTTTGTATTCTGTCAATGCAAGTTGTGAATGAGAGAAGGATTTTGAGTTTAGGTTTTAAGAAGAGGATTGAGGAATAACTATTACTCATATGGAATGTTATCTGCCAATTCTTTTGAGCTCGCCACTGCTGCCCCTTTTGTACCGATGAGATACATTCACCTTTGATTGGCTCCATGGTCTCGTACTTATCCTTCCATATAAGATGTTATCCCCTTTGAAATCAATCCAATGCTAGCATAATAAGAAGGGTAGGGAAAGAAAAGAGAAAATCATGTCTACAAATCTAGTCAGCAAGTTAACTGTCGAATCATTATTTAGATAGTTAACTAACAGTCCAAGCCCAAGGATCTTCTAGAATAATTTCTTGGAGTGATGGAACTAGAATGTAAGTTGTTGAACTTAAGGGACCAAACAAAATTCTATTCTCATATTTAGTGGCAATGAGAATAAAGATTGATTGATAACTTGAATCCCGTTAGAAGTTAGATAACCATTTGGTTTTTGGTCCTTGAGAACTAAATTTATAAACACAATTCTACCATCTCGATTTTTCATTTTGCTGTCTACTTTTTAAGAGTGTTTTAAAAAATTCAAGTCAAGTTTTGAAAACTGAAAAAAGTAGTTTCTAAAAAGTTATTTTTGTTTTCGGCATTTGGCTTGTACAAATGTTTATCTTGAAAGCATGAAAACTATGATTAAGAAATTGTAAAAAACCAAGTACAATTTATTAAAAACTAAAAACCAAATGCATGTTTGGAGTTCAAATTTCTTTCTAGATTTTGGAAGAACTCTAGATGGACTGTTAAATAATCTTTTGTTAACACAACCAAGCCAGTACGCATTGTACCATATCATCGTATCTTTTCTTACGCCTAAACTAGGAGAGAAATCACTTTAACGATATTAACTGTTACAAGACTTTCCACCACCTCAGTTTTGCTTAGTTAATTTCTAGTTGATGCTAGAATCTTCTCCTCTCTTATTATGATCTGTTGTTGGTTCTGTGAAGAATGCCAAATTGGCGCATCAGGAAGCAATAAAGCAAGAAGAAGAAGAAATTCATATGTGTGCTCGTGAACTACTTTCATGTCTTGACTCTCTCTCACAATATAAAGCAGTTGTTAGCTGCAAAATTTCAGATATGGAAAGCTGCCTCTCGAAGGCTGCTGCCGGTATCTCTGAGGCTTTCAAGATTTCTATGCCTGCAGTATAA

mRNA sequence

ATGGGGATTGACTATAAGACAACCATTAAGCCTGCACTTGATTCCTTTGCAGAGGACATAAGGAGAAGTTCCATGATGAAGTTGGAAGAGTTGATTTCTCTCCGGCAGCAATCAAATGAAAATACTGCTAAAATTGAGTCTAAACGCAGTCACATGGCTTCTCTTCAACCCCATATCAATGAACATGAAACACAACTAATCTCCTTAAAAGATGAAATGAGAGATTATATTTTAAGATGCTCCACGGAATCTAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAGGAGAAGCAGAGGAGAGTTTGAAGAATGCCAAATTGGCGCATCAGGAAGCAATAAAGCAAGAAGAAGAAGAAATTCATATGTGTGCTCGTGAACTACTTTCATGTCTTGACTCTCTCTCACAATATAAAGCAGTTGTTAGCTGCAAAATTTCAGATATGGAAAGCTGCCTCTCGAAGGCTGCTGCCGGTATCTCTGAGGCTTTCAAGATTTCTATGCCTGCAGTATAA

Coding sequence (CDS)

ATGGGGATTGACTATAAGACAACCATTAAGCCTGCACTTGATTCCTTTGCAGAGGACATAAGGAGAAGTTCCATGATGAAGTTGGAAGAGTTGATTTCTCTCCGGCAGCAATCAAATGAAAATACTGCTAAAATTGAGTCTAAACGCAGTCACATGGCTTCTCTTCAACCCCATATCAATGAACATGAAACACAACTAATCTCCTTAAAAGATGAAATGAGAGATTATATTTTAAGATGCTCCACGGAATCTAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAGGAGAAGCAGAGGAGAGTTTGAAGAATGCCAAATTGGCGCATCAGGAAGCAATAAAGCAAGAAGAAGAAGAAATTCATATGTGTGCTCGTGAACTACTTTCATGTCTTGACTCTCTCTCACAATATAAAGCAGTTGTTAGCTGCAAAATTTCAGATATGGAAAGCTGCCTCTCGAAGGCTGCTGCCGGTATCTCTGAGGCTTTCAAGATTTCTATGCCTGCAGTATAA

Homology

[Close]

BLAST of CSPI03G22030 vs. TrEMBL
Match: F6I2P0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00940 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-43
Identity = 101/176 (57.39%), Postives = 137/176 (77.84%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           +GIDYK+T+KPALDSFA+DI +SSM KLEELISL+QQS EN AKIE+KR+ +A+LQ   +
Sbjct: 600 LGIDYKSTLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSSSD 659

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           E E QLI LK E ++Y  RC+TE+KK+VEDV+ E HN+D+VE E  + L+ +KL  QEAI
Sbjct: 660 EVEAQLIFLKKESQNYTSRCATEAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAI 719

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA 177
           KQ EEEI MCA EL + +DS+S+YK  ++ KIS+M+  LS+ A  +S+++K S+ A
Sbjct: 720 KQNEEEIQMCAWELYALVDSVSKYKEHMASKISEMKCNLSETAGAVSDSYKGSLLA 775

[Close]

BLAST of CSPI03G22030 vs. TrEMBL
Match: A0A0A0L740_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G213500 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 100/116 (86.21%), Postives = 104/116 (89.66%), Query Frame = 1


Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           E E +++  K E     LRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI
Sbjct: 219 EEEVKVLEAKVEA----LRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 278

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA 177
           KQ EEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFK SMPA
Sbjct: 279 KQGEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFKNSMPA 330

[Close]

BLAST of CSPI03G22030 vs. TrEMBL
Match: F6H969_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g00950 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-41
Identity = 98/176 (55.68%), Postives = 135/176 (76.70%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           +GIDYK+ +KPALDSFA+DI +SSM KLEELISL+QQS EN AKIE+KR+ +A+LQ   +
Sbjct: 386 LGIDYKSALKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSRSD 445

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           E E QL  LK E ++Y  RC+ E+KK+VEDV+ E HN+D+VE E  + L+ +KL  QEAI
Sbjct: 446 EVEAQLNFLKKETQNYTSRCAMEAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAI 505

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA 177
           KQ EEEI +CA EL + +DS+S+YK  ++ KIS+M+S LS+ A  +S+++K S+ A
Sbjct: 506 KQNEEEIQICAWELYALVDSVSKYKEHMASKISEMKSNLSETAGAVSDSYKGSLSA 561

[Close]

BLAST of CSPI03G22030 vs. TrEMBL
Match: A5AI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035303 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-41
Identity = 99/176 (56.25%), Postives = 134/176 (76.14%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           +GIDYK+ +KPALDSFA+DI +SSM KLEELISL+QQS EN AKIE+KR+ +A+LQ   +
Sbjct: 386 LGIDYKSXLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSXSD 445

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           E E QLI LK E ++Y  RC+TE+KK+VEDV+ E HN+D VE E  + L+ +KL  QEAI
Sbjct: 446 EVEAQLIFLKKESQNYTSRCATEAKKLVEDVEIETHNVDXVEREVADVLETSKLKLQEAI 505

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA 177
           KQ EEEI  CA EL + +DS+S+YK  ++ KIS+M+  LS+ A  +S+++K S+ A
Sbjct: 506 KQNEEEIQXCAWELYALVDSVSKYKEHMASKISEMKCNLSETAGAVSDSYKGSLLA 561

[Close]

BLAST of CSPI03G22030 vs. TrEMBL
Match: A5ANM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041326 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-41
Identity = 97/174 (55.75%), Postives = 134/174 (77.01%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           +GIDYK+T+KPALDSFA+DI +SSM KLEELISL+QQS EN AKIE+KR+H+A+LQ   +
Sbjct: 369 LGIDYKSTLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNHLAALQSSSD 428

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           E E QL  LK E ++Y  RC+ E+KK+VEDV+ E HN+D+VE E  + L+ +KL  QEAI
Sbjct: 429 EVEAQLNFLKKETQNYTSRCAXEAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAI 488

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISM 175
           KQ EEEI +CA EL + +DS+ +YK  ++ K S+M+S LS+ A  +S+++K S+
Sbjct: 489 KQNEEEIQICAWELYALVDSVXKYKEHMASKXSEMKSNLSETAGAVSDSYKGSL 542

[Close]

BLAST of CSPI03G22030 vs. TAIR10
Match: AT3G54630.1 (AT3G54630.1 Kinetochore protein Ndc80 (InterPro:IPR005550))

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 71/171 (41.52%), Postives = 117/171 (68.42%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           MG+DYK+ +KPAL S  + I+ SS  K+EEL++L+   +E  +KIESKRS + S+Q  IN
Sbjct: 389 MGVDYKSVVKPALCSLCDGIKGSSAEKVEELVTLQHHKSEMASKIESKRSLLGSIQLQIN 448

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           + E ++  +K E ++   +C  E+K +VE V+ EA NL++VE EA E +K ++L  QEA+
Sbjct: 449 DLEEKMKLVKKETQELSTKCDLEAKTLVESVKAEALNLEVVEKEAAEFVKASELRLQEAV 508

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFK 172
           K+ EEE+  CA +L + +DS+S+ K  +  KIS++++ ++  A+ +SE +K
Sbjct: 509 KESEEEVQACAAQLFALIDSISKQKEYMDSKISEIKTGVADTASAVSEIYK 559

[Close]

BLAST of CSPI03G22030 vs. NCBI nr
Match: gi|778680904|ref|XP_011651417.1| (PREDICTED: uncharacterized protein LOC101211369 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.0e-86
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           MGIDYKTT+KPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN
Sbjct: 75  MGIDYKTTLKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 134

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI
Sbjct: 135 EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 194

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPAV 178
           KQ EEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFKISMPAV
Sbjct: 195 KQGEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPAV 251

[Close]

BLAST of CSPI03G22030 vs. NCBI nr
Match: gi|778680142|ref|XP_004149971.2| (PREDICTED: kinetochore protein NDC80 homolog [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 1.0e-82
Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           MGIDYKTT+KPALDSFAEDIRRSSMMKLEELISLRQQS+ENTAKIESKR H+ASLQ H+N
Sbjct: 389 MGIDYKTTLKPALDSFAEDIRRSSMMKLEELISLRQQSSENTAKIESKRDHIASLQSHVN 448

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI
Sbjct: 449 EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 508

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA 177
           KQ EEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFK SMPA
Sbjct: 509 KQGEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFKNSMPA 564

[Close]

BLAST of CSPI03G22030 vs. NCBI nr
Match: gi|659077518|ref|XP_008439248.1| (PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 3.1e-79
Identity = 161/175 (92.00%), Postives = 170/175 (97.14%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           MGIDYK+T+KPALDSFAEDIRRSSMMKLEELISLRQQS+ENTAKI+SKR+ +ASLQ HIN
Sbjct: 389 MGIDYKSTVKPALDSFAEDIRRSSMMKLEELISLRQQSSENTAKIDSKRNQIASLQSHIN 448

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           EHET+LISLKDEMRDYILRCSTESKKMVED QQEAHNLDLVEGEAEESLKNAKLA+QEA 
Sbjct: 449 EHETKLISLKDEMRDYILRCSTESKKMVEDFQQEAHNLDLVEGEAEESLKNAKLANQEAT 508

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP 176
           KQEEEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFK SMP
Sbjct: 509 KQEEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFKNSMP 563

[Close]

BLAST of CSPI03G22030 vs. NCBI nr
Match: gi|297745003|emb|CBI38595.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 183.0 bits (463), Expect = 4.7e-43
Identity = 101/176 (57.39%), Postives = 137/176 (77.84%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           +GIDYK+T+KPALDSFA+DI +SSM KLEELISL+QQS EN AKIE+KR+ +A+LQ   +
Sbjct: 534 LGIDYKSTLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSSSD 593

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           E E QLI LK E ++Y  RC+TE+KK+VEDV+ E HN+D+VE E  + L+ +KL  QEAI
Sbjct: 594 EVEAQLIFLKKESQNYTSRCATEAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAI 653

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA 177
           KQ EEEI MCA EL + +DS+S+YK  ++ KIS+M+  LS+ A  +S+++K S+ A
Sbjct: 654 KQNEEEIQMCAWELYALVDSVSKYKEHMASKISEMKCNLSETAGAVSDSYKGSLLA 709

[Close]

BLAST of CSPI03G22030 vs. NCBI nr
Match: gi|225455018|ref|XP_002279662.1| (PREDICTED: kinetochore protein ndc80 [Vitis vinifera])

HSP 1 Score: 183.0 bits (463), Expect = 4.7e-43
Identity = 101/176 (57.39%), Postives = 137/176 (77.84%), Query Frame = 1


Query: 1   MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHIN 60
           +GIDYK+T+KPALDSFA+DI +SSM KLEELISL+QQS EN AKIE+KR+ +A+LQ   +
Sbjct: 386 LGIDYKSTLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSSSD 445

Query: 61  EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 120
           E E QLI LK E ++Y  RC+TE+KK+VEDV+ E HN+D+VE E  + L+ +KL  QEAI
Sbjct: 446 EVEAQLIFLKKESQNYTSRCATEAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAI 505

Query: 121 KQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA 177
           KQ EEEI MCA EL + +DS+S+YK  ++ KIS+M+  LS+ A  +S+++K S+ A
Sbjct: 506 KQNEEEIQMCAWELYALVDSVSKYKEHMASKISEMKCNLSETAGAVSDSYKGSLLA 561

The following BLAST results are available for this feature:

BLAST of CSPI03G22030 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G22030 vs. TrEMBL


Match Name	E-value	Identity	Description
F6I2P0_VITVI	3.3e-43	57.39	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00940 PE=4 SV=...	[more]
A0A0A0L740_CUCSA	2.1e-42	86.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G213500 PE=4 SV=1	[more]
F6H969_VITVI	1.4e-41	55.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g00950 PE=4 SV=...	[more]
A5AI77_VITVI	1.8e-41	56.25	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035303 PE=4 SV=1	[more]
A5ANM2_VITVI	1.8e-41	55.75	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041326 PE=4 SV=1	[more]

BLAST of CSPI03G22030 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54630.1	1.3e-30	41.52	Kinetochore protein Ndc80 (InterPro:IPR005550)	[more]

BLAST of CSPI03G22030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680904\|ref\|XP_011651417.1\|	2.0e-86	98.31	PREDICTED: uncharacterized protein LOC101211369 [Cucumis sativus]	[more]
gi\|778680142\|ref\|XP_004149971.2\|	1.0e-82	94.89	PREDICTED: kinetochore protein NDC80 homolog [Cucumis sativus]	[more]
gi\|659077518\|ref\|XP_008439248.1\|	3.1e-79	92.00	PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo]	[more]
gi\|297745003\|emb\|CBI38595.3\|	4.7e-43	57.39	unnamed protein product [Vitis vinifera]	[more]
gi\|225455018\|ref\|XP_002279662.1\|	4.7e-43	57.39	PREDICTED: kinetochore protein ndc80 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0051315	attachment of mitotic spindle microtubules to kinetochore
biological_process	GO:0007010	cytoskeleton organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000778	condensed nuclear chromosome kinetochore
cellular_component	GO:0031262	Ndc80 complex
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005200	structural constituent of cytoskeleton

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G22030.1	CSPI03G22030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 106..126 score: -coord: 59..79 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G22030	Csa3G355040	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G22030	CsaV3_3G021940	Cucumber (Chinese Long) v3	cpicucB153
CSPI03G22030	Cucsa.012910	Cucumber (Gy14) v1	cgycpiB300
CSPI03G22030	CsGy3G021260	Cucumber (Gy14) v2	cgybcpiB119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G22030	Cucurbita pepo (Zucchini)	cpecpiB031
CSPI03G22030	Cucurbita pepo (Zucchini)	cpecpiB210
CSPI03G22030	Bottle gourd (USVL1VR-Ls)	cpilsiB216
CSPI03G22030	Melon (DHL92) v3.6.1	cpimedB234
CSPI03G22030	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G22030	Silver-seed gourd	carcpiB0572
CSPI03G22030	Silver-seed gourd	carcpiB1025
CSPI03G22030	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G22030	Watermelon (97103) v2	cpiwmbB226
CSPI03G22030	Wax gourd	cpiwgoB290
CSPI03G22030	Cucumber (Gy14) v1	cgycpiB299
CSPI03G22030	Cucurbita maxima (Rimu)	cmacpiB328
CSPI03G22030	Cucurbita maxima (Rimu)	cmacpiB415
CSPI03G22030	Cucurbita moschata (Rifu)	cmocpiB319
CSPI03G22030	Cucurbita moschata (Rifu)	cmocpiB403
CSPI03G22030	Melon (DHL92) v3.5.1	cpimeB234
CSPI03G22030	Watermelon (Charleston Gray)	cpiwcgB243
CSPI03G22030	Watermelon (97103) v1	cpiwmB248