CSPI03G20170 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G20170
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	UPF0420 protein C16orf58 like
Location	Chr3 : 15962645 .. 15968195 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCCAAAGTTGAGCTTACTATCTGCCGAAGCGAAGGAATCAGCAGCAAATATTGAAAAGCGACTGCAATTGGGTTCAAAGCTCAGTGATGTGGCCACTTGTGAGGAGGATGTTCTTGAACTCTTAAGTCTGTTCAATAAAGAAAATTATATTCTATCAGAGCACAGGGGAAAATATTGTGTAAGTAAAATCTAAACCCATTTCATTTTAGACCTGAATAAAACTTTTCTTTGGGAAAGGCACAAAGTTGATGGAATTATTTTTCCTGCTCAATTAAATTTGCATTTGGGTTAAATTAATTTTGTTTCTTCTGATTCATTTACTAAACTGTATTTCCACTGTGTGTATTGTTTTGGATTAAGAAGCTTTCTTCTCTTAGTCCAATAGTACTTGATATGAAGCTTTACGCCCTTGTTACCCATGGATTATTAGTTTATGATTTTAGAGAATATTGCAAAAATCATCCATAAAGCAAAAAGATGGGATAGTAAAAAAAACCTCTATACACCCCCTTTTCCATTCACCATCTTTAACCATGTTTTGATGCAAGGCCTCACCAACTCCTGTCACAGAAAGGACGCACAAGAGCACACCCAAGTAATAGGGGAAATATATCTATTGAATTTCATCACAAAAATACATCAATAACCTTAGCCTAATAAGAGGGCTTTACTCTCCACAATGAACTATTGTTCATCCACATAAAATACACATAAACCTAGATAACTAACCCTAGCACAAAACACCCAATATAGACTAACATCGTTCATCCACATAAAACACACATAAACCTTGATAACTAACCCTAGCACAAAACACCCAAATATATACTAACATTTCCTAAGAACATAGGACCACAACAACTACCCTTTTGTCGGGGTGAAAACCCCTTCCTACCCCTCCTCCTATATACTTGCTTAATAGGTGGCCTTGCAATACCCTAATGGAGAAGAGTTACCTTATCCTCAAGGTGAAAATTAGGGAACTGGGCCTTAAGGACAGCGTACGATTCCCAACTTTGGACGGGAAGGATCAGACTCACAACAATAAGGGCGATAGAGTGGCCATGGTGGAGAACATGGTGAGGCATTTGGCTATCACCAAGGACACCATAACAACTGGTCACACATCCATCCATCTCCACAGCCGCAAGCCTACGCTGTTGCTGCTTCTTCATCGTCATCATCAATGGAAAACCTTCTCTGCGAGTACATGCAAAAGAATGATGCCCTTTTGTAGAGTCGGGCTGCTACCATCCGCAATCTGAGTTACAGATGGAGCAAATTGCCAGTGACATCTTCGAAAGACTAAGGGGATCCCTCCCTAACAGTACTGAAACGCCAAACCAAGTGGGGGATCGAAAAAGGATCAGTGTCAATCTGTGATGCTAAGAAACGCAAGGAACTTAACCATCCGCGAACTAGACCAAGAATAGTCAGTCTACTTCTTTGCCTAATACCACGAATGACCATTCACACAGTACTGACACTTCTCCTATTGTTTTTTCTTCAACTAATGATCTTTCTTCTTTGTAGAATGACAGTACTGAAAAACAAGAAAGTTGAGACTACCAGAGAAGATCTAAAATGCAGGCAGACGTCTAATTAGGCGTCATCATCTAATCTGTTGCCTCTCTTTTGACCCAGCATAGCCTTACTGCCACATCACTTGCGTTGCACTTCAGTTTGAAAGGTTGCGACCAATCAGGTGTGATGAGGATAAGCATTGAGGTCAATGCGTCTTTCAAAGTTTGGAACACCTAGTTGCATTTCTCATCAAACATATAGGGTTGGTTGGCGCTTAATAGGTTGCTCAATGGCTTAGCGAGCTGAGAGAAACCTCAAGTGAATCTTTTGTAAAAGCCAGCATGTCCCAAAAAGCTTCGTAAACATTTGATATCAGAAGGCGTTGGAAACTTGCTCACCACATTAATCTTCGCATGGTCTACTTCTAAGCCTGCTTGGAGAGCTTGTGCCCTAGCAAAATCCCCTCGATTATCATTAAATTACACTTTTCCTTGTTGTGTATTAAGCATGTCTTCTTCCATCTCTTCAATACCTCTTCCAAGTTGTTCAGACATTCGATATATGATTTCCAAAGATTGAGAAGTCATTCATAAAAATTTCTACTGATCTGTTTAAAAAGTCCGAAAATATTGCCATCATGCACCTTTAAAATGTCCATGGCAGATTACACAATCCAAAAGGCATGTGATGAAAAGCAAACGTGCCGCAAGGACAAGTAAATGTGGTTTTGTGCTAATCTTTGGGTGCAATAGTTATCTGATTATACCCATAATAGCCATTCAGAAAGCAATAATACTTGTTGCCTGCAAGTTGGTCCAGCATATGATCAATAAAAGACGAGGGAAAGTGGTTCTTCTTTGTTGCCACATTCAGCTTGTGGTAATCCGCCACCCAGTCACTGTTCTTGTTGGGATTAATTCATTATTCCATCGTTGCGGTCTTTAATTGATAATTTGTTGGTCGGTTGAGTAGCTTAGAAGTCATCTGTTTCTTCCATTATATTCTTTGTTGCTTTTTTTTTTCCTTGTTAATTTTATTTGAAATCTTAACATAAAATTTACAAGTTAAAGATAGAGCTATTCAACTAATCAATAGGGAATTAGTTTCATAATTTACTTGATTTCAAGATGCAATTGAATTAAATAATAATAACAATAACAAAAAATTAATAATCTTCCAATTATGTGTGGTAAGGATTCTTTGAATAACTTAATTTTTTTTATTTGCAACTGCCCAAACTAATGATAAAAAGAAGATTCTGTCTGATGAAGTCAATTTGCTAGATTAGTCAACATAGCGTTGGGTGGTTTAACAAACCAAAAACAAAATTTGATGAAAGATCCTCTTAAATAGAATTATTTGATGACGTAGACTGTGTAGTTTATAAGCATATGTTAAAAATTCCATTAAATCTTATCAATTATTTTACAAAGATAAATTGTTACATATGAAAGTGAATTGTCACAAAATATGAAGGTATGTGACCAAATGGTTGCAAATCAAAGTTCATGTTTCCATCAAAGCTCATTGACCTCAAAAAGTGATGTTTAAGCCAAACTATTATCACCAAAAGAAAGAAAAAAAAAGCTAGTTCATGGCAGAGTTACTAAACAGTCCATGCCAGAGATCCAAATCCCCAAAATAAAAGGTAGAGGGGTTATCTTCATTTCATTTGAAAGAAACACATCTAAGGCTAGAAAATCATTCTATTTGAAGTGACCAAGTATTATTTGCTAAGAGTATCACTATATAAACTCAAATCATGCTGGGAATGTTATTTTATTGTGCAGGTAATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAGGACGAGTTACTATACTACAAATTAAAGTACAAAGCTAGCCAGGACATTTCTAACAACACTGGATTTTTTAGAGATGGGTATGAAATTCATCATTTTAAAAAATTGGAACAATGAAAATATTTCAGTAGCAGTAGTAAGCTAAAAGATTATTAGTTATTGATCTGTTAGTAAAATTGTTATTATTTCAA

mRNA sequence

ATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAG

Coding sequence (CDS)

ATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAG

Homology

[Close]

BLAST of CSPI03G20170 vs. Swiss-Prot
Match: RUS1_ARATH (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana GN=RUS1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-27
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKES++P DML+++F VNYL+WLE+NAGI   S  +DC+PGGRL +SL+YV REF+H K
Sbjct: 511 MLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGRLHISLDYVRREFEHAK 570

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            D E  GW T+GLIARPL TRI
Sbjct: 571 EDSESVGWVTEGLIARPLPTRI 592

[Close]

BLAST of CSPI03G20170 vs. TrEMBL
Match: A0A0A0L9N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G254050 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.7e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 66  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 125

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 126 YDGELAGWSTDGLIARPLTTRICECHVT 153

[Close]

BLAST of CSPI03G20170 vs. TrEMBL
Match: A0A0V0ISL3_SOLCH (Putative UPF0420 protein C16orf58-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-31
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           +LKES+SP DMLK++FHVNYL+WLE NAGI +RS +NDCRPGGRLQMSLEYVEREF HVK
Sbjct: 515 VLKESSSPQDMLKSLFHVNYLYWLETNAGIKSRSVANDCRPGGRLQMSLEYVEREFNHVK 574

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            DGE+AGW TD LIARPL  RI
Sbjct: 575 TDGEVAGWVTDSLIARPLPNRI 596

[Close]

BLAST of CSPI03G20170 vs. TrEMBL
Match: D7SX09_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00220 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.3e-31
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           +LKES SP DMLK+VFHVNYL+WLERNAGI +  AS+DCRPGGRLQ+SLEYV+REF H+K
Sbjct: 400 ILKESCSPQDMLKSVFHVNYLYWLERNAGIISMGASDDCRPGGRLQISLEYVQREFNHLK 459

Query: 61  YDGELAGWSTDGLIARPLTTRICECHV 88
            D E  GW+TDGLIARPL  RI   H+
Sbjct: 460 NDSEFVGWATDGLIARPLPNRIRPGHI 486

[Close]

BLAST of CSPI03G20170 vs. TrEMBL
Match: K4CI48_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.3e-31
Identity = 63/82 (76.83%), Postives = 71/82 (86.59%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           +LKES+SP DMLK++FHVNYL+WLE NAGI + S +NDCRPGGRLQMSLEYVEREF HVK
Sbjct: 512 VLKESSSPQDMLKSLFHVNYLYWLETNAGIKSSSVANDCRPGGRLQMSLEYVEREFNHVK 571

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            DGE+AGW TD LIARPL  RI
Sbjct: 572 TDGEVAGWVTDSLIARPLPVRI 593

[Close]

BLAST of CSPI03G20170 vs. TrEMBL
Match: M1BL01_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018482 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.6e-30
Identity = 62/82 (75.61%), Postives = 70/82 (85.37%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           +LKES+SP DMLK++FHVNYL+WLE  AGI + S +NDCRPGGRLQMSLEYVEREF HVK
Sbjct: 515 VLKESSSPQDMLKSLFHVNYLYWLETKAGIKSSSVANDCRPGGRLQMSLEYVEREFNHVK 574

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            DGE+AGW TD LIARPL  RI
Sbjct: 575 TDGEVAGWVTDSLIARPLPNRI 596

[Close]

BLAST of CSPI03G20170 vs. TAIR10
Match: AT3G45890.1 (AT3G45890.1 Protein of unknown function, DUF647)

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-28
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKES++P DML+++F VNYL+WLE+NAGI   S  +DC+PGGRL +SL+YV REF+H K
Sbjct: 511 MLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGRLHISLDYVRREFEHAK 570

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            D E  GW T+GLIARPL TRI
Sbjct: 571 EDSESVGWVTEGLIARPLPTRI 592

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: gi|778680559|ref|XP_011651345.1| (PREDICTED: protein root UVB sensitive 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 525 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 584

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 585 YDGELAGWSTDGLIARPLTTRICECHVT 612

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: gi|700202566|gb|KGN57699.1| (hypothetical protein Csa_3G254050 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 66  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 125

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 126 YDGELAGWSTDGLIARPLTTRICECHVT 153

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: gi|659098056|ref|XP_008449956.1| (PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 524 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 583

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 584 YDGELAGWLTDGLIARPLTTRICECHVT 611

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: gi|719985813|ref|XP_010251509.1| (PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Nelumbo nucifera])

HSP 1 Score: 141.4 bits (355), Expect = 7.9e-31
Identity = 61/88 (69.32%), Postives = 74/88 (84.09%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           +LKE +SP DMLK++FHVNYL+WLERN GI  RSA++DCRPGG+LQ+SL+YV+REF HVK
Sbjct: 579 ILKEGSSPQDMLKSLFHVNYLYWLERNVGIKPRSATDDCRPGGKLQISLDYVQREFHHVK 638

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           +DG LAGW TDGLIARPL  RI   + T
Sbjct: 639 HDGNLAGWDTDGLIARPLANRISVSYAT 666

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: gi|731434384|ref|XP_010645036.1| (PREDICTED: protein root UVB sensitive 1, chloroplastic [Vitis vinifera])

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-30
Identity = 63/87 (72.41%), Postives = 72/87 (82.76%), Query Frame = 1


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           +LKES SP DMLK+VFHVNYL+WLERNAGI +  AS+DCRPGGRLQ+SLEYV+REF H+K
Sbjct: 535 ILKESCSPQDMLKSVFHVNYLYWLERNAGIISMGASDDCRPGGRLQISLEYVQREFNHLK 594

Query: 61  YDGELAGWSTDGLIARPLTTRICECHV 88
            D E  GW+TDGLIARPL  RI   HV
Sbjct: 595 NDSEFVGWATDGLIARPLPNRIRPGHV 621

The following BLAST results are available for this feature:

BLAST of CSPI03G20170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RUS1_ARATH	1.8e-27	64.63	Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana GN=RUS1 PE=1...	[more]

BLAST of CSPI03G20170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9N6_CUCSA	2.7e-46	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G254050 PE=4 SV=1	[more]
A0A0V0ISL3_SOLCH	1.9e-31	78.05	Putative UPF0420 protein C16orf58-like OS=Solanum chacoense PE=4 SV=1	[more]
D7SX09_VITVI	9.3e-31	71.26	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00220 PE=4 SV=...	[more]
K4CI48_SOLLC	9.3e-31	76.83	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
M1BL01_SOLTU	4.6e-30	75.61	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018482 PE=4 SV=1	[more]

BLAST of CSPI03G20170 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45890.1	1.0e-28	64.63	Protein of unknown function, DUF647	[more]

BLAST of CSPI03G20170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680559\|ref\|XP_011651345.1\|	3.9e-46	100.00	PREDICTED: protein root UVB sensitive 1, chloroplastic [Cucumis sativus]	[more]
gi\|700202566\|gb\|KGN57699.1\|	3.9e-46	100.00	hypothetical protein Csa_3G254050 [Cucumis sativus]	[more]
gi\|659098056\|ref\|XP_008449956.1\|	1.9e-45	98.86	PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis melo]	[more]
gi\|719985813\|ref\|XP_010251509.1\|	7.9e-31	69.32	PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Nelumbo nucif...	[more]
gi\|731434384\|ref\|XP_010645036.1\|	1.0e-30	72.41	PREDICTED: protein root UVB sensitive 1, chloroplastic [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006968	RUS_fam
IPR006968	RUS_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0010224	response to UV-B
biological_process	GO:0008150	biological_process
biological_process	GO:0007155	cell adhesion
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009536	plastid
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0005540	hyaluronic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G20170.2	CSPI03G20170.2	mRNA
CSPI03G20170.1	CSPI03G20170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006968	Root UVB sensitive family	PANTHER	PTHR12770	FAMILY NOT NAMED	coord: 1..84 score: 1.5
None	No IPR available	PANTHER	PTHR12770:SF7	PROTEIN ROOT UVB SENSITIVE 1	coord: 1..84 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G20170	Cla007128	Watermelon (97103) v1	cpiwmB234
CSPI03G20170	Csa3G254050	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G20170	MELO3C014739	Melon (DHL92) v3.5.1	cpimeB243
CSPI03G20170	ClCG05G012170	Watermelon (Charleston Gray)	cpiwcgB229
CSPI03G20170	Lsi05G004180	Bottle gourd (USVL1VR-Ls)	cpilsiB210
CSPI03G20170	MELO3C014739.2	Melon (DHL92) v3.6.1	cpimedB231
CSPI03G20170	CsaV3_3G020160	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G20170	Cla97C05G094070	Watermelon (97103) v2	cpiwmbB212
CSPI03G20170	Cucsa.031860	Cucumber (Gy14) v1	cgycpiB003
CSPI03G20170	CmaCh14G007870	Cucurbita maxima (Rimu)	cmacpiB244
CSPI03G20170	CmoCh14G008010	Cucurbita moschata (Rifu)	cmocpiB232
CSPI03G20170	Cp4.1LG03g06320	Cucurbita pepo (Zucchini)	cpecpiB602
CSPI03G20170	CsGy3G019970	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G20170	Carg22296	Silver-seed gourd	carcpiB0520

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G20170	Watermelon (97103) v2	cpiwmbB224
CSPI03G20170	Wax gourd	cpiwgoB291
CSPI03G20170	Watermelon (Charleston Gray)	cpiwcgB241
CSPI03G20170	Watermelon (97103) v1	cpiwmB246