CSPI03G16270 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G16270
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionEmbryo-specific protein 3 isoform 1
LocationChr3 : 12176772 .. 12178578 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAGAAGCTATAACACTTTCGGAAACATTTCCCAATAAGAGACTGCAGGCAGTGCTCGACTAGTTACCGCCATTACCTTATAAAACCCACACATCATTCAATCCCCTCACCATCCTTTTCTTCTCCCTAACGCTTTGTTAAACATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGTCCGCTTTTCAACTTTCTTTGTATTCTCAACTGTCGCTTTTCTAAATTTATCTTTCAACTTTTCTGTAATCTTCTTCTCTTTGTTTCTTTTGTGTTGCTTAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGACACTTATGGAAATCAGGTTTTCTTTCTTTTCTATTTCTTTCAGTTTTTTTTTTCGGAGTGATGAAATTTCCATTTCCGGCCGTTTTGGGATTGGAAATTATCCAGAATGTGAAATAGTATGGTTTTAATTTATGAACTCTAGGGTTATTTTATTTCCCCAAATATAATCAAGGTCATGCGTTCTGTTTGTAGTCTTATTCCAGAATGATTTTCGCCCGAATACTAAACTTCAGATTATGATCATTTTTATTTTGTTTTGTTGATCAAGCTCTGAATCTAAATAGATTGATCTTATTCCGCGGGACTTCTGTTTTGTGTTTGATTGTATAATTTCACAAATTGATAATAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTGATTTTGGGATTGTTGACTGCTCTTTTATGATTCTGCAGTAGCTGTTCGGTTTGCGTAGTAGGTAGATTTTGTAGTGGTGGGTGGGTGATAATGTTTTGTTGAAGTTTCTTCCCCCCATTTCATCATGTTGTAGGGAGTTCTGTGTAAGCTTTCAAAGCTCTAGTGAAACCTTTGTCTTTTCAGTTGTATGGGACTGATGCAATTCTACAGCTACTGCTTGTTCTGTGGCTGTTGGTTGAGAATGTTGGCTCTATATGGATGGGGATGATACTTTATTTTACGTTTCATCCCATTTTCCTCCATGCCTAAAGGTCTATGTAAGCTTCCAAAAAGCTTTTATGTTTTCATCTTTTCAGTTGTATGGGATAATATGTTTCTTTCCATGAGAGTGGGCTCAGTTATCTCAGTATGTCCATCTCTAAAATTGTCTAGTGTTTTCTTTTCATTTTCATCTTTTAAAAGAACTGTGATGGGTGTGATGGCGATATCAATTTTTTTTTTTTAATGTACTTTCTAAATTTCAACACATTGTTAAATGCAC

mRNA sequence

ATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGACACTTATGGAAATCAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTGATTTTGGGATTGTTGACTGCTCTTTTATGA

Coding sequence (CDS)

ATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGACACTTATGGAAATCAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTGATTTTGGGATTGTTGACTGCTCTTTTATGA
Homology
[Close]
BLAST of CSPI03G16270 vs. TrEMBL
Match: A0A0A0L699_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177960 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-125
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1 

Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS
Sbjct: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120
           CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY
Sbjct: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120

Query: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180
           KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH
Sbjct: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180

Query: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 239
           PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL
Sbjct: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 238

[Close]
BLAST of CSPI03G16270 vs. TrEMBL
Match: A0A0A0L8G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.1e-29
Identity = 74/144 (51.39%), Postives = 94/144 (65.28%), Query Frame = 1 

Query: 39  SLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGS 98
           SL I YI+E G C+Y V + TSC+SP  I+SEIGVLFGD  GNQI E KL       F  
Sbjct: 35  SLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRK 94

Query: 99  CKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFG 158
           C+ D F L   PCI QI + Y+YK+G+D+W+P +VEIS   I+ + + + SSIP +TW+G
Sbjct: 95  CRKDIFELIG-PCIDQICFFYLYKNGSDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYG 154

Query: 159 FDLRQYTFPPPPSVFPAPPPPSHP 182
           F+  QY FP P    P PPPPS P
Sbjct: 155 FEDCQY-FPSPSP--PPPPPPSVP 174

[Close]
BLAST of CSPI03G16270 vs. TrEMBL
Match: A0A0A0L5P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177980 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-24
Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 1 

Query: 36  PPSSLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDK-V 95
           P  S  + YIQ++GSCSY V + TSC SP+    +I + FGD YGNQI   +L    + +
Sbjct: 29  PAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRDQISLSFGDAYGNQIYVPRLDDPSRRI 88

Query: 96  FGSCKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNT 155
           F  C +D+F +   PC  QI Y+Y+Y+ G D W+P +V ISG    P+ F + ++IP + 
Sbjct: 89  FERCSSDTFGING-PCAYQICYVYLYRTGPDAWIPTTVRISGDNSRPVTFNYNTAIPGDV 148

Query: 156 WFGFDL 161
           WFGF+L
Sbjct: 149 WFGFNL 153

[Close]
BLAST of CSPI03G16270 vs. TrEMBL
Match: A0A067JQT7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26201 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-23
Identity = 65/163 (39.88%), Postives = 87/163 (53.37%), Query Frame = 1 

Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           M  P   L+    L F+     ++   P  LD      S  +  IQ VGSCSY V V TS
Sbjct: 19  MFKPVYSLLFYFALLFIQSKAESISLKPQALD------SFNLSLIQNVGSCSYRVIVSTS 78

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           C+SP     +I + FGD YGNQI   +L       F  C +D+F +   PC  QI Y+Y+
Sbjct: 79  CSSPKYTRDQISLSFGDAYGNQIYAPRLDDPSSNTFERCSSDTFQISG-PCAYQICYVYL 138

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQ 163
           Y+ G D W P SV+I G   NP+ F + + IP+NTW+GF+L Q
Sbjct: 139 YRTGPDGWKPESVKIYGYNSNPVRFDYNTFIPSNTWYGFNLCQ 174

[Close]
BLAST of CSPI03G16270 vs. TrEMBL
Match: A0A059DK99_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02867 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-23
Identity = 62/152 (40.79%), Postives = 86/152 (56.58%), Query Frame = 1 

Query: 10  LLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCASPSSITS 69
           LLLL SF  V+  A   + + L       S  + YIQ++GSCSY V + TSC+SPS    
Sbjct: 8   LLLLASFFLVLSGA--QSSVLLQQPHALPSFNLSYIQKLGSCSYNVVITTSCSSPSYTRD 67

Query: 70  EIGVLFGDTYGNQIIEKKL-GTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDGADDWL 129
           +I + FGD YGNQI   +L     + F  C +D+F +   PC  QI Y Y Y+ G D W 
Sbjct: 68  QISIAFGDAYGNQIYAPRLDDPSTRTFEGCSSDTFEITG-PCAYQICYAYFYRSGPDGWK 127

Query: 130 PNSVEISGSGINPLLFIFKSSIPTNTWFGFDL 161
           P+SV+I G     + F +++ IP  TW+GF+L
Sbjct: 128 PDSVQIYGYNSKAVTFYYRTFIPGETWYGFNL 156

[Close]
BLAST of CSPI03G16270 vs. TAIR10
Match: AT5G62200.1 (AT5G62200.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-23
Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = 1 

Query: 6   SFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGS-CSYEVTVETSCASP 65
           S  +   L+SF+ ++ ++V  + + LDP     S  +  IQ++G+ C+Y V + TSC+S 
Sbjct: 3   SVRLFFTLISFVFIISTSVYESKV-LDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSST 62

Query: 66  SSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDG 125
                +I V FGD YGNQI   +L     K F  C +D+F +   PC  QI Y+Y+Y+ G
Sbjct: 63  RYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQING-PCTYQICYVYLYRSG 122

Query: 126 ADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFD 160
            D W+PN+V+I   G   + F + + +P + W+GF+
Sbjct: 123 PDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFN 156

[Close]
BLAST of CSPI03G16270 vs. TAIR10
Match: AT2G41475.1 (AT2G41475.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-21
Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 1 

Query: 5   PSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCASP 64
           P FL  L   +  +   S +   P+ +D  +P   L     +   +CSY V ++TSC+S 
Sbjct: 7   PLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKL-----ENAAACSYTVIIKTSCSSV 66

Query: 65  SSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDG 124
           S    +I + FGD YGN++  K+L     + F  C +D++ +   PC+  + Y+Y+ + G
Sbjct: 67  SYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISG-PCMRDVCYLYLLRQG 126

Query: 125 ADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDL 161
           +D W P +V+I GS I  + F +   +P + W+GF++
Sbjct: 127 SDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNV 157

[Close]
BLAST of CSPI03G16270 vs. TAIR10
Match: AT5G62210.1 (AT5G62210.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-18
Identity = 82/225 (36.44%), Postives = 117/225 (52.00%), Query Frame = 1 

Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           M+   S ++LLL+L F   + S      +T +P +  SSL +    E  SC Y V V TS
Sbjct: 1   MECSLSSILLLLVLCFTHPIPS------LTFEPLI--SSLDL---HEEESCPYTVIVTTS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLG---TGDKVFGSCKTDSFVLKDRPCIIQISYM 120
           C SP     ++ +  GD   NQ++  +L    +G   F  C +D+F +K + C+  I  +
Sbjct: 61  CFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGK-CLNTICSV 120

Query: 121 YIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPP 180
           YIY+ G D W+P +VEI   G   + F F  ++P N W+G +    T  PPPS      P
Sbjct: 121 YIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNNTDLPPPS---PDFP 180

Query: 181 PSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQ 223
           P  P +PPP P    P  PP+P   PPPPPP P P ++S + SGQ
Sbjct: 181 PFSPSIPPPSP----PYFPPEPPSIPPPPPPSP-PSAASGRGSGQ 205

[Close]
BLAST of CSPI03G16270 vs. TAIR10
Match: AT5G07190.1 (AT5G07190.1 seed gene 3)

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-17
Identity = 60/155 (38.71%), Postives = 82/155 (52.90%), Query Frame = 1 

Query: 49  GSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLG---TGDKVFGSCKTDSFVL 108
           G+C Y V V TSC SP S   +I ++FGD  GN++   KLG    G    G C T++F +
Sbjct: 32  GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 91

Query: 109 KDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIP-TNTWFGFDLRQYT 168
           + +     I  +YI ++G D W+P S+EI   G   + F F  S+P  NTW+G +    T
Sbjct: 92  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 151

Query: 169 FPPPPSVFPAPPPPSHPLVPPPEPIFSSPPPPPKP 200
             P     P  PPP  P   PPE   + PPPPP+P
Sbjct: 152 GRPSS---PDLPPPHFPPEFPPETPTTPPPPPPRP 183

[Close]
BLAST of CSPI03G16270 vs. NCBI nr
Match: gi|449460780|ref|XP_004148123.1| (PREDICTED: WAS protein family homolog 1-like [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 1.7e-125
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1 

Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS
Sbjct: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120
           CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY
Sbjct: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120

Query: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180
           KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH
Sbjct: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180

Query: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 239
           PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL
Sbjct: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 238

[Close]
BLAST of CSPI03G16270 vs. NCBI nr
Match: gi|659077282|ref|XP_008439123.1| (PREDICTED: sulfated surface glycoprotein 185-like [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 2.6e-105
Identity = 213/247 (86.23%), Postives = 220/247 (89.07%), Query Frame = 1 

Query: 1   MDTPPS-FLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVET 60
           MDTPPS F +LLL LSFLAVVCSAV+P PITLDP+V PSSLPI YIQEVGSCSY VTV T
Sbjct: 1   MDTPPSPFFLLLLPLSFLAVVCSAVLPAPITLDPEVAPSSLPIHYIQEVGSCSYYVTVAT 60

Query: 61  SCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           SCASPSSI SEIGVLFGDTYGNQIIEKKL  GDKVFGSCKTDSFVLKDRPCI+QISYMYI
Sbjct: 61  SCASPSSIASEIGVLFGDTYGNQIIEKKLSNGDKVFGSCKTDSFVLKDRPCIVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTF-PPPPSVFPA---- 180
           YKDG DDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTF PPPPSVFPA    
Sbjct: 121 YKDGDDDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPPSVFPAPPLP 180

Query: 181 ---PPPPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVIL 239
              PPPP +P VPPPEP+F  PPPPPKP+LPPPPPP  PTPPSSSSKISGQK GMVSVIL
Sbjct: 181 WLSPPPPPYPTVPPPEPVFPPPPPPPKPVLPPPPPPAHPTPPSSSSKISGQKSGMVSVIL 240

[Close]
BLAST of CSPI03G16270 vs. NCBI nr
Match: gi|659077284|ref|XP_008439124.1| (PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29
Identity = 84/182 (46.15%), Postives = 107/182 (58.79%), Query Frame = 1 

Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           M TP     +  L S  A   +  +P P +        SL I YI+E G C+Y V + TS
Sbjct: 10  MATPLLPFFIFSLFSISASQSTGSLPQPAS-------KSLSIAYIREAGDCNYRVNITTS 69

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           C+SP  I+SEIGVLFGD +GNQI E KL       FG C+ D F L   PC  QI + Y+
Sbjct: 70  CSSPFYISSEIGVLFGDAHGNQIYEPKLEVESGNAFGKCRKDIFELIG-PCTDQICFFYL 129

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPS 180
           YK+G+DDW+P +VEIS   I+ + + + SSIP +TW+GFD  QY FP P    P PPPPS
Sbjct: 130 YKNGSDDWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFDDCQY-FPSPSP--PPPPPPS 180

Query: 181 HP 182
            P
Sbjct: 190 VP 180

[Close]
BLAST of CSPI03G16270 vs. NCBI nr
Match: gi|449460842|ref|XP_004148153.1| (PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28
Identity = 74/144 (51.39%), Postives = 94/144 (65.28%), Query Frame = 1 

Query: 39  SLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGS 98
           SL I YI+E G C+Y V + TSC+SP  I+SEIGVLFGD  GNQI E KL       F  
Sbjct: 35  SLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRK 94

Query: 99  CKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFG 158
           C+ D F L   PCI QI + Y+YK+G+D+W+P +VEIS   I+ + + + SSIP +TW+G
Sbjct: 95  CRKDIFELIG-PCIDQICFFYLYKNGSDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYG 154

Query: 159 FDLRQYTFPPPPSVFPAPPPPSHP 182
           F+  QY FP P    P PPPPS P
Sbjct: 155 FEDCQY-FPSPSP--PPPPPPSVP 174

[Close]
BLAST of CSPI03G16270 vs. NCBI nr
Match: gi|659077288|ref|XP_008439126.1| (PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 3.0e-24
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 1 

Query: 36  PPSSLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDK-V 95
           P  S  + YIQ++GSCSY V + TSC SP+    +I + FGD YGNQI   +L    + +
Sbjct: 29  PAESFNLTYIQQLGSCSYSVVISTSCLSPTYTRDQISLSFGDAYGNQIYVPRLDDPSRRI 88

Query: 96  FGSCKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNT 155
           F  C +D+F +   PC  QI Y+Y+Y+ G D W+P +V ISG    P+ F + ++IP++ 
Sbjct: 89  FERCSSDTFGING-PCAYQICYVYLYRTGPDAWIPTTVTISGHNSRPVTFNYNTAIPSDV 148

Query: 156 WFGFDL 161
           WFGF+L
Sbjct: 149 WFGFNL 153

The following BLAST results are available for this feature:
BLAST of CSPI03G16270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G16270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L699_CUCSA1.2e-125100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177960 PE=4 SV=1[more]
A0A0A0L8G7_CUCSA8.1e-2951.39Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1[more]
A0A0A0L5P4_CUCSA2.7e-2442.86Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177980 PE=4 SV=1[more]
A0A067JQT7_JATCU2.3e-2339.88Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26201 PE=4 SV=1[more]
A0A059DK99_EUCGR3.0e-2340.79Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02867 PE=4 SV=1[more]
BLAST of CSPI03G16270 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G62200.13.5e-2335.26 Embryo-specific protein 3, (ATS3)[more]
AT2G41475.12.5e-2130.57 Embryo-specific protein 3, (ATS3)[more]
AT5G62210.15.7e-1836.44 Embryo-specific protein 3, (ATS3)[more]
AT5G07190.11.7e-1738.71 seed gene 3[more]
BLAST of CSPI03G16270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460780|ref|XP_004148123.1|1.7e-125100.00PREDICTED: WAS protein family homolog 1-like [Cucumis sativus][more]
gi|659077282|ref|XP_008439123.1|2.6e-10586.23PREDICTED: sulfated surface glycoprotein 185-like [Cucumis melo][more]
gi|659077284|ref|XP_008439124.1|1.0e-2946.15PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo][more]
gi|449460842|ref|XP_004148153.1|1.2e-2851.39PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus][more]
gi|659077288|ref|XP_008439126.1|3.0e-2442.86PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001024PLAT/LH2_dom
IPR010417Embryo-specific_ATS3
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005730 nucleolus
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0004222 metalloendopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G16270.1CSPI03G16270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001024PLAT/LH2 domainunknownSSF49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 48..157
score: 2.23
IPR010417Embryo-specific 3PFAMPF06232ATS3coord: 47..159
score: 4.3
NoneNo IPR availablePANTHERPTHR31718FAMILY NOT NAMEDcoord: 1..189
score: 5.0
NoneNo IPR availablePANTHERPTHR31718:SF8EMBRYO-SPECIFIC PROTEIN 3coord: 1..189
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G16270Cla006242Watermelon (97103) v1cpiwmB231
CSPI03G16270Csa3G177960Cucumber (Chinese Long) v2cpicuB120
CSPI03G16270MELO3C006843Melon (DHL92) v3.5.1cpimeB230
CSPI03G16270ClCG05G007550Watermelon (Charleston Gray)cpiwcgB226
CSPI03G16270Lsi05G012950Bottle gourd (USVL1VR-Ls)cpilsiB208
CSPI03G16270MELO3C006843.2Melon (DHL92) v3.6.1cpimedB224
CSPI03G16270CsaV3_3G016450Cucumber (Chinese Long) v3cpicucB144
CSPI03G16270Cla97C05G089440Watermelon (97103) v2cpiwmbB209
CSPI03G16270Cucsa.251300Cucumber (Gy14) v1cgycpiB383
CSPI03G16270CmaCh16G001700Cucurbita maxima (Rimu)cmacpiB335
CSPI03G16270CmoCh16G001750Cucurbita moschata (Rifu)cmocpiB325
CSPI03G16270Cp4.1LG14g05630Cucurbita pepo (Zucchini)cpecpiB217
CSPI03G16270CsGy3G016350Cucumber (Gy14) v2cgybcpiB110
CSPI03G16270Carg16716Silver-seed gourdcarcpiB0905
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G16270Cucumber (Chinese Long) v3cpicucB169
CSPI03G16270Cucumber (Chinese Long) v3cpicucB190
CSPI03G16270Watermelon (97103) v2cpiwmbB181
CSPI03G16270Watermelon (97103) v2cpiwmbB243
CSPI03G16270Wild cucumber (PI 183967)cpicpiB113
CSPI03G16270Wild cucumber (PI 183967)cpicpiB116
CSPI03G16270Wild cucumber (PI 183967)cpicpiB139
CSPI03G16270Cucumber (Gy14) v1cgycpiB453
CSPI03G16270Cucumber (Gy14) v1cgycpiB536
CSPI03G16270Cucurbita maxima (Rimu)cmacpiB286
CSPI03G16270Cucurbita maxima (Rimu)cmacpiB413
CSPI03G16270Cucurbita maxima (Rimu)cmacpiB601
CSPI03G16270Cucurbita maxima (Rimu)cmacpiB609
CSPI03G16270Cucurbita moschata (Rifu)cmocpiB276
CSPI03G16270Cucurbita moschata (Rifu)cmocpiB401
CSPI03G16270Cucurbita moschata (Rifu)cmocpiB589
CSPI03G16270Cucurbita moschata (Rifu)cmocpiB598
CSPI03G16270Cucurbita moschata (Rifu)cmocpiB891
CSPI03G16270Cucumber (Chinese Long) v2cpicuB138
CSPI03G16270Cucumber (Chinese Long) v2cpicuB141
CSPI03G16270Cucumber (Chinese Long) v2cpicuB161
CSPI03G16270Melon (DHL92) v3.5.1cpimeB163
CSPI03G16270Melon (DHL92) v3.5.1cpimeB176
CSPI03G16270Watermelon (Charleston Gray)cpiwcgB210
CSPI03G16270Watermelon (97103) v1cpiwmB261
CSPI03G16270Cucurbita pepo (Zucchini)cpecpiB034
CSPI03G16270Cucurbita pepo (Zucchini)cpecpiB171
CSPI03G16270Cucurbita pepo (Zucchini)cpecpiB721
CSPI03G16270Cucurbita pepo (Zucchini)cpecpiB725
CSPI03G16270Bottle gourd (USVL1VR-Ls)cpilsiB155
CSPI03G16270Melon (DHL92) v3.6.1cpimedB154
CSPI03G16270Melon (DHL92) v3.6.1cpimedB167
CSPI03G16270Cucumber (Gy14) v2cgybcpiB213
CSPI03G16270Cucumber (Gy14) v2cgybcpiB275
CSPI03G16270Silver-seed gourdcarcpiB0112
CSPI03G16270Silver-seed gourdcarcpiB0745
CSPI03G16270Silver-seed gourdcarcpiB0955
CSPI03G16270Silver-seed gourdcarcpiB0976