CmaCh16G001700 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G001700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Embryo-specific family protein
Location	Cma_Chr16 : 744827 .. 747468 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATAACTATCCCAAAATAAGAAAAAAAGAAAAAAAGAAAAAAAGAAAAGAAAAGAAAAATTGAGTACCTTTCAATAGTTGAAATAAATATGGGTGGCGTAGAATTTATGTCTCTGTGTTCTTCCGTATTCTTTTTCTTCTTCAAAAGCTCCGCAACGCTAAAGCCAAACACACAAACAAGGAGAAATGAAACGGGTTCTCTGTTTTCTGCTCACCTCCGCCTTTCTTTTGGCTCTCTTGGAAGCCACGGAATTGCTGCCCGAATCCGCTGAATCCTTCAATTTAACCTATATTCAGGTATCAGCATTCCGTGTCGGTTTTTTTTTTTTTTTTCCATTTATGCTGATTTCCAGTCTTGTATCTTACAACCATTTCGTGTTTCTCTTCTTCTTTCTTGTTTGGGGATTTCTGATGTTGAAGCAACTCGGGAGTTGTTCTTATTCGGTCGTTATATCAACTAGCTGTTCTTCGCCTACATACACAAGGGATCAGATCAGCGTTTCTTTCGGCGATGCTTATGGCAACCAGGTTTTCTTCGTTTAAATCTTCAATTTTTCCATTCATTTTATCAGAATACAAAGCCCTGGGTTTCTCGATCGTTCGTGATCGAACTAATTTCAGTTATTCGAAATGGTCGATGAACGAAATCGTAGTTGAATTTTGCATCTGAGTTTGGGAATAATTTTACATTTGGCGAGGGATATAAAAACATATTAATATCGTTAGGTTAAAGTAATTGATTGGTCATCCTTTATCTTTCGATGCAAAATGAAAGAGAAATCGAGTTGGGTTTGTATTTCTCGATTATGATGAGATGATAGCCTGTTGATTTATATGTTTCAGAACTTCAAATCAGATATTTATTTATTTGTTCTTAATATCTTAGAAAGATCCATAGTCATTAGCAAGTTGAGCAATATCGTGTAGCCTACTTAAACGTCTACAACTTCCTAAAACATTTTTAAAGAGCGTCATGCCATCGTTCGATCATTCAAAAACAATAAAAATCGTCTTTACTTTCAGATTAATTTTGGAATTTGACATGTTACAATTAATGATTGAAGAAACTTGTGTACCAGATTTATGTGCCTAGGATTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCCTCTGATACATTTAGCGTAAGTGGACCTTGTGCTTACCAATTATGCTATGTCTATCTTTATCGCTCTGGACCGGATGCCTGGATCCCAACAACGGTGAAAATCTCTGGTCCTAATTCTCGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGACGTATGGTTCGGGTTTAACTTGTGTGGTCATGCTTCATCTTCAAACCGTATTTCAAGTTGCATATGGTTCTTATACGTTAGTTTCGTGTCTATTCTTCTGCTTTTTTTGTAATTTTAATGTATGTCAAAATGCTATTCATGTTCTTTTCTTGTGAAGAACACATTTTGATGTAGCACTCTTGTAGCATAGAGAACATGAGTATCTCACTATAAAGCAGCATCAGGAGTGTACTTATGTATATTTAGTGATTATACACAGGCAGAGGCAATTCTTGGTGATTGAGCCTCTCGACTTGGGATAAGCTTTTCGATGTCTTGTTATGGAACTCAGAAACAGAGGATTTTTCTGTTTTTATTTACCTTTTAGATGTGTTGGCCTTTGATTCATGTGAGATTCTCCTATTGTTAGCTTTATCCTATAAATATCTGTTTTTATCAACCATTAAGCTGGGTAATAGCCCCAGTCTCTGATGTATTGGAGGTTGGGGGACTGGATTTGTTCTTGTAAGCGCTAATTACTATCATTATTATTATTTGATCATAAACGATGATGCCCGATCATAATCAAAATATTTGTAAGTAAAGCAAAAAAATTTCATTTCATATCATTTTCTTTTTGTAACAATTTTATCCTCATCCGTGTATTATCCCGATATCTAATTTATTTTATATACTAGTTGTATATGAATAATATATATACTAATATTCTTTCAAAATTCATTTGAGGTATAAGGTTGATGTACCCATATTACTATATAATGAATCTAAAATTTTATATTAGATGACCTTCAAATTTGTGCGGTAAGGAAATTTGACATAAGTTTTTATAACATTTGAATCATCAAAAAAGAAAACAGAAAAAAGAAGAAATTCTTGGGGAGCAAGGAAATTGGTGGAAGATTCTGGACCTGAAACTGTTCCATTCGGCTTGGAATTTGGGTCTATCCGATATTAAGATGATGAGTCTGCCGATGCCCCAGCCCCCGCCAAGCTGTCAATGCATCGGCTCTCCATGGCCGCCACGGTACGCATCTTAACTTCCACACAAATCCGGATCAACCCATTTCACTTCCTGCCTTGTTGCTTCTTCCAACTTCTTTTCTCCCCTTTTGATTCTACTTTCCCCTTCTCGGAAACTTTTATACATATATTCATGAGTGAATTAGTTTCTGATTGATTCTCATCTATTGGATTACACATATGTTTTGCTCTAGAGATATGAGTTGCTATATAGAAAATCCAAGTCTGCATTTGATGCATTTCGGAACTTGTCTTCAAAGATTTTTCCCGAGTTAATTCGAGATTCTAAGTCAAGAATTTCCCACGGTGGGTATTCGTTTACGGCTTGA

mRNA sequence

ATTTATAACTATCCCAAAATAAGAAAAAAAGAAAAAAAGAAAAAAAGAAAAGAAAAGAAAAATTGAGTACCTTTCAATAGTTGAAATAAATATGGGTGGCGTAGAATTTATGTCTCTGTGTTCTTCCGTATTCTTTTTCTTCTTCAAAAGCTCCGCAACGCTAAAGCCAAACACACAAACAAGGAGAAATGAAACGGGTTCTCTGTTTTCTGCTCACCTCCGCCTTTCTTTTGGCTCTCTTGGAAGCCACGGAATTGCTGCCCGAATCCGCTGAATCCTTCAATTTAACCTATATTCAGCAACTCGGGAGTTGTTCTTATTCGGTCGTTATATCAACTAGCTGTTCTTCGCCTACATACACAAGGGATCAGATCAGCGTTTCTTTCGGCGATGCTTATGGCAACCAGATTTATGTGCCTAGGATTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCCTCTGATACATTTAGCGTAAGTGGACCTTGTGCTTACCAATTATGCTATGTCTATCTTTATCGCTCTGGACCGGATGCCTGGATCCCAACAACGGTGAAAATCTCTGGTCCTAATTCTCGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGACGTATGGTTCGGGTTTAACTTGTGTGGTCATGCTTCATCTTCAAACCGTATTTCAAGTTGCATATGGTTCTTATACGCAGAGGCAATTCTTGATGATGAGTCTGCCGATGCCCCAGCCCCCGCCAAGCTGTCAATGCATCGGCTCTCCATGGCCGCCACGAGATATGAGTTGCTATATAGAAAATCCAAGTCTGCATTTGATGCATTTCGGAACTTGTCTTCAAAGATTTTTCCCGAGTTAATTCGAGATTCTAAGTCAAGAATTTCCCACGGTGGGTATTCGTTTACGGCTTGA

Coding sequence (CDS)

ATGAAACGGGTTCTCTGTTTTCTGCTCACCTCCGCCTTTCTTTTGGCTCTCTTGGAAGCCACGGAATTGCTGCCCGAATCCGCTGAATCCTTCAATTTAACCTATATTCAGCAACTCGGGAGTTGTTCTTATTCGGTCGTTATATCAACTAGCTGTTCTTCGCCTACATACACAAGGGATCAGATCAGCGTTTCTTTCGGCGATGCTTATGGCAACCAGATTTATGTGCCTAGGATTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCCTCTGATACATTTAGCGTAAGTGGACCTTGTGCTTACCAATTATGCTATGTCTATCTTTATCGCTCTGGACCGGATGCCTGGATCCCAACAACGGTGAAAATCTCTGGTCCTAATTCTCGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGACGTATGGTTCGGGTTTAACTTGTGTGGTCATGCTTCATCTTCAAACCGTATTTCAAGTTGCATATGGTTCTTATACGCAGAGGCAATTCTTGATGATGAGTCTGCCGATGCCCCAGCCCCCGCCAAGCTGTCAATGCATCGGCTCTCCATGGCCGCCACGAGATATGAGTTGCTATATAGAAAATCCAAGTCTGCATTTGATGCATTTCGGAACTTGTCTTCAAAGATTTTTCCCGAGTTAATTCGAGATTCTAAGTCAAGAATTTCCCACGGTGGGTATTCGTTTACGGCTTGA

Protein sequence

MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIPTTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYAEAILDDESADAPAPAKLSMHRLSMAATRYELLYRKSKSAFDAFRNLSSKIFPELIRDSKSRISHGGYSFTA

Homology

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BLAST of CmaCh16G001700 vs. TrEMBL
Match: A0A0A0L5P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177980 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 7.8e-80
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 1


Query: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60
           +K VLC LLTSA L + LEATELLP+ AESFNLTYIQQLGSCSYSVVISTSC SP YTRD
Sbjct: 3   IKGVLCLLLTSAILFSFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRD 62

Query: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSDTF ++GPCAYQ+CYVYLYR+GPDAWIP
Sbjct: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122

Query: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLY 170
           TTV+ISG NSRPVTFNYNTAIP DVWFGFNLCGH SSSNRISSCI + Y
Sbjct: 123 TTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFY 171

[Close]

BLAST of CmaCh16G001700 vs. TrEMBL
Match: A0A061G0A9_THECC (DEAD-box ATP-dependent RNA helicase 7 OS=Theobroma cacao GN=TCM_015015 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55
Identity = 102/142 (71.83%), Postives = 119/142 (83.80%), Query Frame = 1


Query: 19  EATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRDQISVSFGDAYGNQIYVPR 78
           E+    P++ ESFN++YIQ LGSCSYSVVISTSCSS +YTRDQIS++FGDAYGNQIYVPR
Sbjct: 234 ESISQKPQAFESFNVSYIQNLGSCSYSVVISTSCSSTSYTRDQISIAFGDAYGNQIYVPR 293

Query: 79  IDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIPTTVKISGPNSRPVTFNYN 138
           +DDPS R FE+CSSDTF + GPCAYQ+CYVYLYRSGPD W P +VKI G NSR VTF Y+
Sbjct: 294 LDDPSTRTFEQCSSDTFEIYGPCAYQICYVYLYRSGPDGWKPESVKIYGYNSRAVTFYYD 353

Query: 139 TAIPNDVWFGFNLCGHASSSNR 161
           T IP D+W+GFN C  ASSS+R
Sbjct: 354 TFIPGDIWYGFNYCNTASSSHR 375

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BLAST of CmaCh16G001700 vs. TrEMBL
Match: A0A067JQT7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26201 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-54
Identity = 102/164 (62.20%), Postives = 124/164 (75.61%), Query Frame = 1


Query: 5   LCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRDQISV 64
           L F     F+ +  E+  L P++ +SFNL+ IQ +GSCSY V++STSCSSP YTRDQIS+
Sbjct: 26  LLFYFALLFIQSKAESISLKPQALDSFNLSLIQNVGSCSYRVIVSTSCSSPKYTRDQISL 85

Query: 65  SFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIPTTVK 124
           SFGDAYGNQIY PR+DDPS   FERCSSDTF +SGPCAYQ+CYVYLYR+GPD W P +VK
Sbjct: 86  SFGDAYGNQIYAPRLDDPSSNTFERCSSDTFQISGPCAYQICYVYLYRTGPDGWKPESVK 145

Query: 125 ISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFL 169
           I G NS PV F+YNT IP++ W+GFNLC  ASS+       WF+
Sbjct: 146 IYGYNSNPVRFDYNTFIPSNTWYGFNLCQSASSAQIQRIPGWFM 189

[Close]

BLAST of CmaCh16G001700 vs. TrEMBL
Match: V4S840_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006003mg PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.5e-54
Identity = 105/167 (62.87%), Postives = 128/167 (76.65%), Query Frame = 1


Query: 5   LCFLLTSAFLLALLEAT--ELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRDQI 64
           +  LL  AF L+  E T  +L P + ESFN++YIQ LGSCSY+VVI+TSCSS  YTRDQI
Sbjct: 7   ILLLLAFAFTLSEAETTSLQLKPRAFESFNVSYIQNLGSCSYTVVITTSCSSSKYTRDQI 66

Query: 65  SVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIPTT 124
           S++FGDAYGNQIY PR+DDPS   FE CSSDTF + GPCAYQ+CYVYLYR+GPD W P +
Sbjct: 67  SIAFGDAYGNQIYAPRLDDPSTDAFESCSSDTFEIRGPCAYQICYVYLYRTGPDGWKPES 126

Query: 125 VKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLY 170
           VKI G NSR V+F YNT IP+D+W+GFNLC  ASS+++     W +Y
Sbjct: 127 VKIYGANSRAVSFYYNTFIPSDIWYGFNLCRSASSAHQQHVPRWSVY 173

[Close]

BLAST of CmaCh16G001700 vs. TrEMBL
Match: A0A0S3SMT6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G071600 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.3e-54
Identity = 104/171 (60.82%), Postives = 130/171 (76.02%), Query Frame = 1


Query: 3   RVLCFLLTSAFLLALLEA--TELLPESAESFNLTYIQ--QLGSCSYSVVISTSCSSPTYT 62
           R+L   L S F L++ E+  T LLP +A+SFN++YIQ     +CSY VVISTSCSSP+YT
Sbjct: 69  RLLLLFLASGFTLSVSESQSTSLLPHAADSFNVSYIQLKNAATCSYLVVISTSCSSPSYT 128

Query: 63  RDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAW 122
           RDQIS++FGDAYGNQIY+PR+DDP+   FE CSSDTF ++GPCAYQ+CYVYLYR G D W
Sbjct: 129 RDQISIAFGDAYGNQIYIPRLDDPTSGTFESCSSDTFQITGPCAYQICYVYLYRHGSDGW 188

Query: 123 IPTTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLY 170
            P +VKI+  N R VTF YNT IP D W+GF+LC  ASSSN++S   W ++
Sbjct: 189 RPESVKINSYNGRAVTFYYNTYIPGDTWYGFDLCSGASSSNQVSKQKWLIF 239

[Close]

BLAST of CmaCh16G001700 vs. TAIR10
Match: AT5G62200.1 (AT5G62200.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-53
Identity = 92/136 (67.65%), Postives = 109/136 (80.15%), Query Frame = 1


Query: 25  PESAESFNLTYIQQLG-SCSYSVVISTSCSSPTYTRDQISVSFGDAYGNQIYVPRIDDPS 84
           P  AESFN++ IQ+LG +C+Y+V+ISTSCSS  YTRDQISV+FGD YGNQIY PR+DDPS
Sbjct: 30  PHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPS 89

Query: 85  RRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIPTTVKISGPNSRPVTFNYNTAIPN 144
            + FE+CSSDTF ++GPC YQ+CYVYLYRSGPD WIP TVKI    S+ VTF YNT +P 
Sbjct: 90  TKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPE 149

Query: 145 DVWFGFNLCGHASSSN 160
            VW+GFN C  AS SN
Sbjct: 150 SVWYGFNYCNSASDSN 165

[Close]

BLAST of CmaCh16G001700 vs. TAIR10
Match: AT2G41475.1 (AT2G41475.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 167.5 bits (423), Expect = 9.8e-42
Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 1


Query: 13  FLLALLEATELLPESAESFNLTY------------IQQLGSCSYSVVISTSCSSPTYTRD 72
           FL AL   T  L  SA SF  T             ++   +CSY+V+I TSCSS +YTRD
Sbjct: 9   FLFALCSFT--LFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRD 68

Query: 73  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIP 132
           +IS+SFGD YGN++YV R+DDPS R FE+CSSDT+ +SGPC   +CY+YL R G D W P
Sbjct: 69  KISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKP 128

Query: 133 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLC---GHASSSNRISS 164
             VKI G + R VTF YN  +PN VW+GFN+C   G+  SS  IS+
Sbjct: 129 ENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVCNGIGNTKSSQPIST 172

[Close]

BLAST of CmaCh16G001700 vs. TAIR10
Match: AT5G62210.1 (AT5G62210.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-29
Identity = 62/150 (41.33%), Postives = 92/150 (61.33%), Query Frame = 1


Query: 9   LTSAFLLALLEATELLPESAES--FNLTYIQQLGSCSYSVVISTSCSSPTYTRDQISVSF 68
           L+S  LL +L  T  +P        +   + +  SC Y+V+++TSC SP ++RDQ++++ 
Sbjct: 5   LSSILLLLVLCFTHPIPSLTFEPLISSLDLHEEESCPYTVIVTTSCFSPDWSRDQVTIAL 64

Query: 69  GDAYGNQIYVPRIDDP--SRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIPTTVK 128
           GDA  NQ+  PR+D P      FE+CSSDTF V G C   +C VY+YRSG D WIP TV+
Sbjct: 65  GDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGKCLNTICSVYIYRSGTDGWIPETVE 124

Query: 129 ISGPNSRPVTFNYNTAIPNDVWFGFNLCGH 155
           I    S+ V F++N  +P ++W+G N C +
Sbjct: 125 IYKEGSKSVKFDFNKNVPENIWYGNNYCNN 154

[Close]

BLAST of CmaCh16G001700 vs. TAIR10
Match: AT5G07190.1 (AT5G07190.1 seed gene 3)

HSP 1 Score: 111.7 bits (278), Expect = 6.4e-25
Identity = 54/128 (42.19%), Postives = 84/128 (65.62%), Query Frame = 1


Query: 30  SFNLTYIQ-QLGSCSYSVVISTSCSSPTYTRDQISVSFGDAYGNQIYVPRIDDPSRRI-- 89
           +F+L+ IQ Q G+C Y+VV+ TSC SP  TRDQIS+ FGDA GN++Y P++    R    
Sbjct: 21  AFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGG 80

Query: 90  FERCSSDTFSVSGPCAYQ-LCYVYLYRSGPDAWIPTTVKISGPNSRPVTFNYNTAIPN-D 149
             +CS++TF V G C    +C +Y+ R+GPD W+P +++I    S+ V F+++ ++P  +
Sbjct: 81  LGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLN 140

Query: 150 VWFGFNLC 153
            W+G N C
Sbjct: 141 TWYGHNNC 148

[Close]

BLAST of CmaCh16G001700 vs. NCBI nr
Match: gi|449460778|ref|XP_004148122.1| (PREDICTED: uncharacterized protein LOC101207117 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 1.1e-79
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 1


Query: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60
           +K VLC LLTSA L + LEATELLP+ AESFNLTYIQQLGSCSYSVVISTSC SP YTRD
Sbjct: 3   IKGVLCLLLTSAILFSFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRD 62

Query: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSDTF ++GPCAYQ+CYVYLYR+GPDAWIP
Sbjct: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122

Query: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLY 170
           TTV+ISG NSRPVTFNYNTAIP DVWFGFNLCGH SSSNRISSCI + Y
Sbjct: 123 TTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFY 171

[Close]

BLAST of CmaCh16G001700 vs. NCBI nr
Match: gi|659077288|ref|XP_008439126.1| (PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo])

HSP 1 Score: 299.7 bits (766), Expect = 4.7e-78
Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 1


Query: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60
           +K VLC LLTSA L   LEATELLP+ AESFNLTYIQQLGSCSYSVVISTSC SPTYTRD
Sbjct: 3   IKGVLCLLLTSAILFPSLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPTYTRD 62

Query: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSDTF ++GPCAYQ+CYVYLYR+GPDAWIP
Sbjct: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122

Query: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLY 170
           TTV ISG NSRPVTFNYNTAIP+DVWFGFNLCGH SSSN IS CI   Y
Sbjct: 123 TTVTISGHNSRPVTFNYNTAIPSDVWFGFNLCGHPSSSNHISGCIGCFY 171

[Close]

BLAST of CmaCh16G001700 vs. NCBI nr
Match: gi|1009122409|ref|XP_015877988.1| (PREDICTED: uncharacterized protein LOC107414390 [Ziziphus jujuba])

HSP 1 Score: 231.5 bits (589), Expect = 1.6e-57
Identity = 114/171 (66.67%), Postives = 129/171 (75.44%), Query Frame = 1


Query: 1   MKRVLCFLLTSAFLLALLEATEL---LPESAESFNLTYIQQLGSCSYSVVISTSCSSPTY 60
           M R L  LL SAF+  L  A EL   LP +A +FNL+YIQ   SCSYSVVI+TSCSS  Y
Sbjct: 1   MMRALSILLLSAFIFNLSAAEELSSPLPHAANNFNLSYIQNEASCSYSVVITTSCSSSKY 60

Query: 61  TRDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDA 120
           TRDQIS++FGDAYGNQIY PR+DDPS   FERCSSDTF + GPCAYQ+CYVYLYRSGPD 
Sbjct: 61  TRDQISIAFGDAYGNQIYAPRLDDPSSGAFERCSSDTFDIYGPCAYQICYVYLYRSGPDG 120

Query: 121 WIPTTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFL 169
           W P +VKI G NSR VTF YNT IP+DVW+GFNLC  ASSS +     WF+
Sbjct: 121 WKPESVKIYGDNSRAVTFTYNTFIPSDVWYGFNLCNDASSSYQRYGRRWFM 171

[Close]

BLAST of CmaCh16G001700 vs. NCBI nr
Match: gi|1009122184|ref|XP_015877865.1| (PREDICTED: uncharacterized protein LOC107414269 [Ziziphus jujuba])

HSP 1 Score: 231.5 bits (589), Expect = 1.6e-57
Identity = 114/171 (66.67%), Postives = 129/171 (75.44%), Query Frame = 1


Query: 1   MKRVLCFLLTSAFLLALLEATEL---LPESAESFNLTYIQQLGSCSYSVVISTSCSSPTY 60
           M R L  LL SAF+  L  A EL   LP +A +FNL+YIQ   SCSYSVVI+TSCSS  Y
Sbjct: 1   MMRALSILLLSAFIFNLSAAEELSSPLPHAANNFNLSYIQNEASCSYSVVITTSCSSSKY 60

Query: 61  TRDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDA 120
           TRDQIS++FGDAYGNQIY PR+DDPS   FERCSSDTF + GPCAYQ+CYVYLYRSGPD 
Sbjct: 61  TRDQISIAFGDAYGNQIYAPRLDDPSSGAFERCSSDTFDIYGPCAYQICYVYLYRSGPDG 120

Query: 121 WIPTTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFL 169
           W P +VKI G NSR VTF YNT IP+DVW+GFNLC  ASSS +     WF+
Sbjct: 121 WKPDSVKIYGDNSRAVTFTYNTFIPSDVWYGFNLCNDASSSYQRYGRRWFM 171

[Close]

BLAST of CmaCh16G001700 vs. NCBI nr
Match: gi|590672031|ref|XP_007038495.1| (DEAD-box ATP-dependent RNA helicase 7 [Theobroma cacao])

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-55
Identity = 102/142 (71.83%), Postives = 119/142 (83.80%), Query Frame = 1


Query: 19  EATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRDQISVSFGDAYGNQIYVPR 78
           E+    P++ ESFN++YIQ LGSCSYSVVISTSCSS +YTRDQIS++FGDAYGNQIYVPR
Sbjct: 234 ESISQKPQAFESFNVSYIQNLGSCSYSVVISTSCSSTSYTRDQISIAFGDAYGNQIYVPR 293

Query: 79  IDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIPTTVKISGPNSRPVTFNYN 138
           +DDPS R FE+CSSDTF + GPCAYQ+CYVYLYRSGPD W P +VKI G NSR VTF Y+
Sbjct: 294 LDDPSTRTFEQCSSDTFEIYGPCAYQICYVYLYRSGPDGWKPESVKIYGYNSRAVTFYYD 353

Query: 139 TAIPNDVWFGFNLCGHASSSNR 161
           T IP D+W+GFN C  ASSS+R
Sbjct: 354 TFIPGDIWYGFNYCNTASSSHR 375

The following BLAST results are available for this feature:

BLAST of CmaCh16G001700 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G001700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5P4_CUCSA	7.8e-80	85.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177980 PE=4 SV=1	[more]
A0A061G0A9_THECC	1.3e-55	71.83	DEAD-box ATP-dependent RNA helicase 7 OS=Theobroma cacao GN=TCM_015015 PE=4 SV=1	[more]
A0A067JQT7_JATCU	1.9e-54	62.20	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26201 PE=4 SV=1	[more]
V4S840_9ROSI	2.5e-54	62.87	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006003mg PE=4 SV=1	[more]
A0A0S3SMT6_PHAAN	3.3e-54	60.82	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G071600 PE=...	[more]

BLAST of CmaCh16G001700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62200.1	1.9e-53	67.65	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	9.8e-42	51.20	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	1.5e-29	41.33	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	6.4e-25	42.19	seed gene 3	[more]

BLAST of CmaCh16G001700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460778\|ref\|XP_004148122.1\|	1.1e-79	85.21	PREDICTED: uncharacterized protein LOC101207117 [Cucumis sativus]	[more]
gi\|659077288\|ref\|XP_008439126.1\|	4.7e-78	84.62	PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo]	[more]
gi\|1009122409\|ref\|XP_015877988.1\|	1.6e-57	66.67	PREDICTED: uncharacterized protein LOC107414390 [Ziziphus jujuba]	[more]
gi\|1009122184\|ref\|XP_015877865.1\|	1.6e-57	66.67	PREDICTED: uncharacterized protein LOC107414269 [Ziziphus jujuba]	[more]
gi\|590672031\|ref\|XP_007038495.1\|	1.9e-55	71.83	DEAD-box ATP-dependent RNA helicase 7 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001024	PLAT/LH2_dom
IPR010417	Embryo-specific_ATS3

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004222	metalloendopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G001700.1	CmaCh16G001700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	GENE3D	G3DSA:2.60.60.20		coord: 41..142 score: 4.
IPR001024	PLAT/LH2 domain	unknown	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 38..149 score: 5.4
IPR010417	Embryo-specific 3	PFAM	PF06232	ATS3	coord: 37..152 score: 4.2
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 4..174 score: 4.1
None	No IPR available	PANTHER	PTHR31718:SF8	EMBRYO-SPECIFIC PROTEIN 3	coord: 4..174 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G001700	Cucsa.251300	Cucumber (Gy14) v1	cgycmaB0711
CmaCh16G001700	Cla006242	Watermelon (97103) v1	cmawmB316
CmaCh16G001700	Csa3G177960	Cucumber (Chinese Long) v2	cmacuB329
CmaCh16G001700	MELO3C006843	Melon (DHL92) v3.5.1	cmameB296
CmaCh16G001700	ClCG05G007550	Watermelon (Charleston Gray)	cmawcgB296
CmaCh16G001700	CSPI03G16270	Wild cucumber (PI 183967)	cmacpiB335
CmaCh16G001700	CmoCh16G001740	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G001700	Lsi05G012950	Bottle gourd (USVL1VR-Ls)	cmalsiB312
CmaCh16G001700	Cp4.1LG14g05630	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G001700	MELO3C006843.2	Melon (DHL92) v3.6.1	cmamedB344
CmaCh16G001700	CsaV3_3G016450	Cucumber (Chinese Long) v3	cmacucB0383
CmaCh16G001700	Cla97C05G089440	Watermelon (97103) v2	cmawmbB346
CmaCh16G001700	CsGy3G016350	Cucumber (Gy14) v2	cgybcmaB342
CmaCh16G001700	Carg16716	Silver-seed gourd	carcmaB1206

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G001700	Cucumber (Gy14) v1	cgycmaB0996
CmaCh16G001700	Cucurbita moschata (Rifu)	cmacmoB327
CmaCh16G001700	Wild cucumber (PI 183967)	cmacpiB350
CmaCh16G001700	Cucumber (Chinese Long) v2	cmacuB346
CmaCh16G001700	Melon (DHL92) v3.5.1	cmameB286
CmaCh16G001700	Watermelon (Charleston Gray)	cmawcgB299
CmaCh16G001700	Watermelon (97103) v1	cmawmB322
CmaCh16G001700	Watermelon (97103) v1	cmawmB326
CmaCh16G001700	Cucurbita pepo (Zucchini)	cmacpeB339
CmaCh16G001700	Cucurbita pepo (Zucchini)	cmacpeB342
CmaCh16G001700	Cucurbita pepo (Zucchini)	cmacpeB358
CmaCh16G001700	Bottle gourd (USVL1VR-Ls)	cmalsiB303
CmaCh16G001700	Cucumber (Gy14) v2	cgybcmaB749
CmaCh16G001700	Melon (DHL92) v3.6.1	cmamedB329
CmaCh16G001700	Silver-seed gourd	carcmaB0130
CmaCh16G001700	Silver-seed gourd	carcmaB0994
CmaCh16G001700	Silver-seed gourd	carcmaB1264
CmaCh16G001700	Cucumber (Chinese Long) v3	cmacucB0411
CmaCh16G001700	Watermelon (97103) v2	cmawmbB349
CmaCh16G001700	Cucurbita maxima (Rimu)	cmacmaB338
CmaCh16G001700	Cucurbita maxima (Rimu)	cmacmaB345
CmaCh16G001700	Cucurbita maxima (Rimu)	cmacmaB346
CmaCh16G001700	Cucurbita maxima (Rimu)	cmacmaB359