CSPI03G16270.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G16270.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Embryo-specific protein 3 isoform 1
Location	Chr3 : 12176772 .. 12178578 (+)
Sequence length	717

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGAAGCTATAACACTTTCGGAAACATTTCCCAATAAGAGACTGCAGGCAGTGCTCGACTAGTTACCGCCATTACCTTATAAAACCCACACATCATTCAATCCCCTCACCATCCTTTTCTTCTCCCTAACGCTTTGTTAAACATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGTCCGCTTTTCAACTTTCTTTGTATTCTCAACTGTCGCTTTTCTAAATTTATCTTTCAACTTTTCTGTAATCTTCTTCTCTTTGTTTCTTTTGTGTTGCTTAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGACACTTATGGAAATCAGGTTTTCTTTCTTTTCTATTTCTTTCAGTTTTTTTTTTCGGAGTGATGAAATTTCCATTTCCGGCCGTTTTGGGATTGGAAATTATCCAGAATGTGAAATAGTATGGTTTTAATTTATGAACTCTAGGGTTATTTTATTTCCCCAAATATAATCAAGGTCATGCGTTCTGTTTGTAGTCTTATTCCAGAATGATTTTCGCCCGAATACTAAACTTCAGATTATGATCATTTTTATTTTGTTTTGTTGATCAAGCTCTGAATCTAAATAGATTGATCTTATTCCGCGGGACTTCTGTTTTGTGTTTGATTGTATAATTTCACAAATTGATAATAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTGATTTTGGGATTGTTGACTGCTCTTTTATGATTCTGCAGTAGCTGTTCGGTTTGCGTAGTAGGTAGATTTTGTAGTGGTGGGTGGGTGATAATGTTTTGTTGAAGTTTCTTCCCCCCATTTCATCATGTTGTAGGGAGTTCTGTGTAAGCTTTCAAAGCTCTAGTGAAACCTTTGTCTTTTCAGTTGTATGGGACTGATGCAATTCTACAGCTACTGCTTGTTCTGTGGCTGTTGGTTGAGAATGTTGGCTCTATATGGATGGGGATGATACTTTATTTTACGTTTCATCCCATTTTCCTCCATGCCTAAAGGTCTATGTAAGCTTCCAAAAAGCTTTTATGTTTTCATCTTTTCAGTTGTATGGGATAATATGTTTCTTTCCATGAGAGTGGGCTCAGTTATCTCAGTATGTCCATCTCTAAAATTGTCTAGTGTTTTCTTTTCATTTTCATCTTTTAAAAGAACTGTGATGGGTGTGATGGCGATATCAATTTTTTTTTTTTAATGTACTTTCTAAATTTCAACACATTGTTAAATGCAC

mRNA sequence

ATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGACACTTATGGAAATCAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTGATTTTGGGATTGTTGACTGCTCTTTTATGA

Coding sequence (CDS)

ATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGACACTTATGGAAATCAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTGATTTTGGGATTGTTGACTGCTCTTTTATGA

Homology

[Close]

BLAST of CSPI03G16270.1 vs. TrEMBL
Match: A0A0A0L699_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177960 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-125
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS
Sbjct: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120
           CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY
Sbjct: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120

Query: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180
           KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH
Sbjct: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180

Query: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 239
           PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL
Sbjct: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 238

[Close]

BLAST of CSPI03G16270.1 vs. TrEMBL
Match: A0A0A0L8G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.1e-29
Identity = 74/144 (51.39%), Postives = 94/144 (65.28%), Query Frame = 1


Query: 39  SLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGS 98
           SL I YI+E G C+Y V + TSC+SP  I+SEIGVLFGD  GNQI E KL       F  
Sbjct: 35  SLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRK 94

Query: 99  CKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFG 158
           C+ D F L   PCI QI + Y+YK+G+D+W+P +VEIS   I+ + + + SSIP +TW+G
Sbjct: 95  CRKDIFELIG-PCIDQICFFYLYKNGSDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYG 154

Query: 159 FDLRQYTFPPPPSVFPAPPPPSHP 182
           F+  QY FP P    P PPPPS P
Sbjct: 155 FEDCQY-FPSPSP--PPPPPPSVP 174

[Close]

BLAST of CSPI03G16270.1 vs. TrEMBL
Match: A0A0A0L5P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177980 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-24
Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 1


Query: 36  PPSSLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDK-V 95
           P  S  + YIQ++GSCSY V + TSC SP+    +I + FGD YGNQI   +L    + +
Sbjct: 29  PAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRDQISLSFGDAYGNQIYVPRLDDPSRRI 88

Query: 96  FGSCKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNT 155
           F  C +D+F +   PC  QI Y+Y+Y+ G D W+P +V ISG    P+ F + ++IP + 
Sbjct: 89  FERCSSDTFGING-PCAYQICYVYLYRTGPDAWIPTTVRISGDNSRPVTFNYNTAIPGDV 148

Query: 156 WFGFDL 161
           WFGF+L
Sbjct: 149 WFGFNL 153

[Close]

BLAST of CSPI03G16270.1 vs. TrEMBL
Match: A0A067JQT7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26201 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-23
Identity = 65/163 (39.88%), Postives = 87/163 (53.37%), Query Frame = 1


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           M  P   L+    L F+     ++   P  LD      S  +  IQ VGSCSY V V TS
Sbjct: 19  MFKPVYSLLFYFALLFIQSKAESISLKPQALD------SFNLSLIQNVGSCSYRVIVSTS 78

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           C+SP     +I + FGD YGNQI   +L       F  C +D+F +   PC  QI Y+Y+
Sbjct: 79  CSSPKYTRDQISLSFGDAYGNQIYAPRLDDPSSNTFERCSSDTFQISG-PCAYQICYVYL 138

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQ 163
           Y+ G D W P SV+I G   NP+ F + + IP+NTW+GF+L Q
Sbjct: 139 YRTGPDGWKPESVKIYGYNSNPVRFDYNTFIPSNTWYGFNLCQ 174

[Close]

BLAST of CSPI03G16270.1 vs. TrEMBL
Match: A0A059DK99_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02867 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-23
Identity = 62/152 (40.79%), Postives = 86/152 (56.58%), Query Frame = 1


Query: 10  LLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCASPSSITS 69
           LLLL SF  V+  A   + + L       S  + YIQ++GSCSY V + TSC+SPS    
Sbjct: 8   LLLLASFFLVLSGA--QSSVLLQQPHALPSFNLSYIQKLGSCSYNVVITTSCSSPSYTRD 67

Query: 70  EIGVLFGDTYGNQIIEKKL-GTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDGADDWL 129
           +I + FGD YGNQI   +L     + F  C +D+F +   PC  QI Y Y Y+ G D W 
Sbjct: 68  QISIAFGDAYGNQIYAPRLDDPSTRTFEGCSSDTFEITG-PCAYQICYAYFYRSGPDGWK 127

Query: 130 PNSVEISGSGINPLLFIFKSSIPTNTWFGFDL 161
           P+SV+I G     + F +++ IP  TW+GF+L
Sbjct: 128 PDSVQIYGYNSKAVTFYYRTFIPGETWYGFNL 156

[Close]

BLAST of CSPI03G16270.1 vs. TAIR10
Match: AT5G62200.1 (AT5G62200.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-23
Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = 1


Query: 6   SFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGS-CSYEVTVETSCASP 65
           S  +   L+SF+ ++ ++V  + + LDP     S  +  IQ++G+ C+Y V + TSC+S 
Sbjct: 3   SVRLFFTLISFVFIISTSVYESKV-LDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSST 62

Query: 66  SSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDG 125
                +I V FGD YGNQI   +L     K F  C +D+F +   PC  QI Y+Y+Y+ G
Sbjct: 63  RYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQING-PCTYQICYVYLYRSG 122

Query: 126 ADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFD 160
            D W+PN+V+I   G   + F + + +P + W+GF+
Sbjct: 123 PDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFN 156

[Close]

BLAST of CSPI03G16270.1 vs. TAIR10
Match: AT2G41475.1 (AT2G41475.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-21
Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 1


Query: 5   PSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCASP 64
           P FL  L   +  +   S +   P+ +D  +P   L     +   +CSY V ++TSC+S 
Sbjct: 7   PLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKL-----ENAAACSYTVIIKTSCSSV 66

Query: 65  SSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDG 124
           S    +I + FGD YGN++  K+L     + F  C +D++ +   PC+  + Y+Y+ + G
Sbjct: 67  SYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISG-PCMRDVCYLYLLRQG 126

Query: 125 ADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDL 161
           +D W P +V+I GS I  + F +   +P + W+GF++
Sbjct: 127 SDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNV 157

[Close]

BLAST of CSPI03G16270.1 vs. TAIR10
Match: AT5G62210.1 (AT5G62210.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-18
Identity = 82/225 (36.44%), Postives = 117/225 (52.00%), Query Frame = 1


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           M+   S ++LLL+L F   + S      +T +P +  SSL +    E  SC Y V V TS
Sbjct: 1   MECSLSSILLLLVLCFTHPIPS------LTFEPLI--SSLDL---HEEESCPYTVIVTTS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLG---TGDKVFGSCKTDSFVLKDRPCIIQISYM 120
           C SP     ++ +  GD   NQ++  +L    +G   F  C +D+F +K + C+  I  +
Sbjct: 61  CFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGK-CLNTICSV 120

Query: 121 YIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPP 180
           YIY+ G D W+P +VEI   G   + F F  ++P N W+G +    T  PPPS      P
Sbjct: 121 YIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNNTDLPPPS---PDFP 180

Query: 181 PSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQ 223
           P  P +PPP P    P  PP+P   PPPPPP P P ++S + SGQ
Sbjct: 181 PFSPSIPPPSP----PYFPPEPPSIPPPPPPSP-PSAASGRGSGQ 205

[Close]

BLAST of CSPI03G16270.1 vs. TAIR10
Match: AT5G07190.1 (AT5G07190.1 seed gene 3)

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-17
Identity = 60/155 (38.71%), Postives = 82/155 (52.90%), Query Frame = 1


Query: 49  GSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLG---TGDKVFGSCKTDSFVL 108
           G+C Y V V TSC SP S   +I ++FGD  GN++   KLG    G    G C T++F +
Sbjct: 32  GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 91

Query: 109 KDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIP-TNTWFGFDLRQYT 168
           + +     I  +YI ++G D W+P S+EI   G   + F F  S+P  NTW+G +    T
Sbjct: 92  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 151

Query: 169 FPPPPSVFPAPPPPSHPLVPPPEPIFSSPPPPPKP 200
             P     P  PPP  P   PPE   + PPPPP+P
Sbjct: 152 GRPSS---PDLPPPHFPPEFPPETPTTPPPPPPRP 183

[Close]

BLAST of CSPI03G16270.1 vs. NCBI nr
Match: gi|449460780|ref|XP_004148123.1| (PREDICTED: WAS protein family homolog 1-like [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 1.7e-125
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS
Sbjct: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120
           CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY
Sbjct: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120

Query: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180
           KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH
Sbjct: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180

Query: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 239
           PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL
Sbjct: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 238

[Close]

BLAST of CSPI03G16270.1 vs. NCBI nr
Match: gi|659077282|ref|XP_008439123.1| (PREDICTED: sulfated surface glycoprotein 185-like [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 2.6e-105
Identity = 213/247 (86.23%), Postives = 220/247 (89.07%), Query Frame = 1


Query: 1   MDTPPS-FLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVET 60
           MDTPPS F +LLL LSFLAVVCSAV+P PITLDP+V PSSLPI YIQEVGSCSY VTV T
Sbjct: 1   MDTPPSPFFLLLLPLSFLAVVCSAVLPAPITLDPEVAPSSLPIHYIQEVGSCSYYVTVAT 60

Query: 61  SCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           SCASPSSI SEIGVLFGDTYGNQIIEKKL  GDKVFGSCKTDSFVLKDRPCI+QISYMYI
Sbjct: 61  SCASPSSIASEIGVLFGDTYGNQIIEKKLSNGDKVFGSCKTDSFVLKDRPCIVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTF-PPPPSVFPA---- 180
           YKDG DDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTF PPPPSVFPA    
Sbjct: 121 YKDGDDDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPPSVFPAPPLP 180

Query: 181 ---PPPPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVIL 239
              PPPP +P VPPPEP+F  PPPPPKP+LPPPPPP  PTPPSSSSKISGQK GMVSVIL
Sbjct: 181 WLSPPPPPYPTVPPPEPVFPPPPPPPKPVLPPPPPPAHPTPPSSSSKISGQKSGMVSVIL 240

[Close]

BLAST of CSPI03G16270.1 vs. NCBI nr
Match: gi|659077284|ref|XP_008439124.1| (PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29
Identity = 84/182 (46.15%), Postives = 107/182 (58.79%), Query Frame = 1


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           M TP     +  L S  A   +  +P P +        SL I YI+E G C+Y V + TS
Sbjct: 10  MATPLLPFFIFSLFSISASQSTGSLPQPAS-------KSLSIAYIREAGDCNYRVNITTS 69

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           C+SP  I+SEIGVLFGD +GNQI E KL       FG C+ D F L   PC  QI + Y+
Sbjct: 70  CSSPFYISSEIGVLFGDAHGNQIYEPKLEVESGNAFGKCRKDIFELIG-PCTDQICFFYL 129

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPS 180
           YK+G+DDW+P +VEIS   I+ + + + SSIP +TW+GFD  QY FP P    P PPPPS
Sbjct: 130 YKNGSDDWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFDDCQY-FPSPSP--PPPPPPS 180

Query: 181 HP 182
            P
Sbjct: 190 VP 180

[Close]

BLAST of CSPI03G16270.1 vs. NCBI nr
Match: gi|449460842|ref|XP_004148153.1| (PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28
Identity = 74/144 (51.39%), Postives = 94/144 (65.28%), Query Frame = 1


Query: 39  SLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGT-GDKVFGS 98
           SL I YI+E G C+Y V + TSC+SP  I+SEIGVLFGD  GNQI E KL       F  
Sbjct: 35  SLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRK 94

Query: 99  CKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFG 158
           C+ D F L   PCI QI + Y+YK+G+D+W+P +VEIS   I+ + + + SSIP +TW+G
Sbjct: 95  CRKDIFELIG-PCIDQICFFYLYKNGSDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYG 154

Query: 159 FDLRQYTFPPPPSVFPAPPPPSHP 182
           F+  QY FP P    P PPPPS P
Sbjct: 155 FEDCQY-FPSPSP--PPPPPPSVP 174

[Close]

BLAST of CSPI03G16270.1 vs. NCBI nr
Match: gi|659077288|ref|XP_008439126.1| (PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 3.0e-24
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 1


Query: 36  PPSSLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDK-V 95
           P  S  + YIQ++GSCSY V + TSC SP+    +I + FGD YGNQI   +L    + +
Sbjct: 29  PAESFNLTYIQQLGSCSYSVVISTSCLSPTYTRDQISLSFGDAYGNQIYVPRLDDPSRRI 88

Query: 96  FGSCKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNT 155
           F  C +D+F +   PC  QI Y+Y+Y+ G D W+P +V ISG    P+ F + ++IP++ 
Sbjct: 89  FERCSSDTFGING-PCAYQICYVYLYRTGPDAWIPTTVTISGHNSRPVTFNYNTAIPSDV 148

Query: 156 WFGFDL 161
           WFGF+L
Sbjct: 149 WFGFNL 153

The following BLAST results are available for this feature:

BLAST of CSPI03G16270.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G16270.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L699_CUCSA	1.2e-125	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177960 PE=4 SV=1	[more]
A0A0A0L8G7_CUCSA	8.1e-29	51.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1	[more]
A0A0A0L5P4_CUCSA	2.7e-24	42.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177980 PE=4 SV=1	[more]
A0A067JQT7_JATCU	2.3e-23	39.88	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26201 PE=4 SV=1	[more]
A0A059DK99_EUCGR	3.0e-23	40.79	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02867 PE=4 SV=1	[more]

BLAST of CSPI03G16270.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62200.1	3.5e-23	35.26	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	2.5e-21	30.57	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	5.7e-18	36.44	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	1.7e-17	38.71	seed gene 3	[more]

BLAST of CSPI03G16270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460780\|ref\|XP_004148123.1\|	1.7e-125	100.00	PREDICTED: WAS protein family homolog 1-like [Cucumis sativus]	[more]
gi\|659077282\|ref\|XP_008439123.1\|	2.6e-105	86.23	PREDICTED: sulfated surface glycoprotein 185-like [Cucumis melo]	[more]
gi\|659077284\|ref\|XP_008439124.1\|	1.0e-29	46.15	PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo]	[more]
gi\|449460842\|ref\|XP_004148153.1\|	1.2e-28	51.39	PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus]	[more]
gi\|659077288\|ref\|XP_008439126.1\|	3.0e-24	42.86	PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001024	PLAT/LH2_dom
IPR010417	Embryo-specific_ATS3

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G16270	CSPI03G16270	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G16270.1	CSPI03G16270.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G16270.1.utr5p1	CSPI03G16270.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G16270.1.cds1	CSPI03G16270.1.cds1	CDS
CSPI03G16270.1.cds2	CSPI03G16270.1.cds2	CDS
CSPI03G16270.1.cds3	CSPI03G16270.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G16270.1.utr3p1	CSPI03G16270.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	unknown	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 48..157 score: 2.23
IPR010417	Embryo-specific 3	PFAM	PF06232	ATS3	coord: 47..159 score: 4.3
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 1..189 score: 5.0
None	No IPR available	PANTHER	PTHR31718:SF8	EMBRYO-SPECIFIC PROTEIN 3	coord: 1..189 score: 5.0