CSPI03G10600 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATGGAGCAAAAATCAAACTAGAGGCCTTCCATTTGGGTCACCGTAGCGTAGTGCGAACGAAAATCAAATTTCCGTCCGTCATGAGCACTTAAATGGAATTTCGGGGCAGTAGCAACAGTAGCCATTCTTCGACGGAGCTCTCTGCATGCTCCTCATCTTTTCCGCCGTGGTCGTTCTCCGCATCGGAGTTCGATCAGCCGTTTACAGAGCAACAACTCCAAGCAATTGAGGCCATTGAAGCTGCTTATCAATCCACCAGCGCCAAAAAACGACGACCAAATTCCACGCCCGACGGAAACGAGGTCTCATGCGTTTCTCCCGACACCGGCCGTCGACTGCCTCGTTCCATTTTTTCTCATCAGTCTCCACGTTTTTCTCCCCTATCGCCCTGTCGAGGTATTTTGTTATTTCTACTGTAAAATGTATTGTAGCAGAGGCGAGGAATTTGGGGAACCATGGGTTGTGGTTTTTGAACTATCTTTTGGGGATCTAGGTTTTTTACTTTTGTGCTGAAATTGGAAGTGCGGGTATGTCTGTACTGTTTTGGGTTTCAGTAAACTCGAAGATGAGGTTTCCTGCATTGAATTATGGTGGCCGAATTATTTACAGTAGAACTGTGAGTGAGGTCGATAGAGCGTCTAGGGAGCTAGCGAAGAAAATCAACTCCACGAGGAAAGCAATGGATCAAATTACTATTGGGTTCGACATCGAGTGGAGACCCTCATTTAAAAGAGGTCAGCAGTTGATTCGATTGAACAAACTTACACGTGAATTTTGAAGTTTCATCCACTACTAGAAAACGCAAATGCTTCTTTCGGTTTCTTGTTACACATTTCTCCTCTCATCTGTCGCTATTTCGCCAAACAATTGAATCGAATACGGTTTTCTTTATTCAAAAGTATGTTAGTTGTGTTTCTCGTAGGAACCAAATCTGTAGTGTCTTCAAGAACCAGAAATATTATTTGGATTTCCTCCTCAATGTGATGATCCTTCGTTCATTGAATTTTCTTTTTGTTAAAAGTTTCCCCTCAAGAAATTTATGCTTGACAACAGAACAAATGCATGAAAATATTCATTTCGCTATCAATTAACTTCAATCATGCACAACCTTATTTGATAAGATTGAAATTGTTGCTGGCTCTTATGATCTGCCAGAAGTTATTCTTGGAGAGAGCTATGAGGATAGCTCAAGTGGAAGAAACATATATATTTAACCAAAAAGTTAAAAGGTTTGAATCTCCTAGTTCCCACATGTTGCTGATCTAAAAGCAAAAGAAAAAGAGAAAGAAAGCGATTTATTGTTTCTTTCTTGCGGTATTTGCTGATTGTTTAATGAAATTACGGCTGAGAATTAGACCTTGGATTCTCGATTCCCCCAGTTCTTTGTGACTATAGTTTGTTGCTTTATCTGGTTTTTGTGGTTAAACTCAAATCTTGGTTGGTTGGTGGCTGGTAACTCAACAGAACTTAAGCTAATTACTCCTTCTATCATTCTTACAACCTGTTTAATTTTTTGTGGCTTCCGCAAAATCTGTTGATCAAAACTAGAATTTCTACTTCTTTGACTCTTCTGAGATGAATTTATATGCAGGTGTTCCACCCGGAAAAGCAGCAGTTATGCAACTGTGCCTGGAAAATTCTGAATGCCATGTGATGCATATCATTCATTCGGGAATACCTCAAAGTTTGCAGGCTCTTCTAGAGGATGACACACTCAGCAAGGTTTGAAACATCACTATAGTTGCTTCTATAAGTTTGTTTTCATATATTACTTAGAAGTTTTAAGCCATTTTAATCAACCATGTTGAATAAACTTCAGGCTGGAGTTGGGATTGCCAGTGATGCTTCAAAAGTTTTTAAAGAGTATAATGTGTCTGTCAAACCATTGAACGAAATTTCAGATCTAGCTAATCAAAAGCTTGCTGGAGTTCCCAAAAAATGGGGTCTTCGGGCTCTAACTGAGACGCTTATATCAAAAGAGGTGGTCTACTACTACTACTTCTGTTTGTATGAGTTTAAGCTGTTTGAATTGAAATATTTCTTATCAATGTAATGAAGTAAAAAGTTCTGGAAATGTTTTGGAATTCTTTTTGAAGTACTTAAAAAAGAGTTTTTAAATTTTGAAAAATAAGTTAAATCTAAGCCCTTGTTTTGTAAATCATTTTCTTTTTGTTCTTGGTTTTTAAAAACTAACCTTCTAAAACCTACTTTCACCTCTAAATTATGTTATATTGCAAACTAATAGGAGCAACTTTTAAAAACAGTTTTTTTTTTGGATTTTGAAAAAGAATCCAAATGTTTCTTCAAAGATAGTGAAACCAGGTAATAATATTGATTGATAAAACAAGTTTAAATTTAAAAAATCAAGTCAGGGTTAACAGAGCTGTAAATTTTCTGCTCGAACGATTTTCAAACATTCCAACCCGTTTACTAGTTACTTCTTAGATGCCGAAAACCAATTTTAATTTCTGAAACTTGTGTAGTTCTCTCTTCTTCATCCATAACCCCAATACTATACTCTTATATTCATATTAATGAAGTAAATGTTCATAGAGATCCTAAGCTCAGAGATATTTACAATTTGCAAATCAAATTTTCACCTTTACAATTGAACATTGTAGCTTCAAAAGCCCGACAGAATCAGACTTGGGAACTGGGAGGTGGCTGTGTTGTCAAAGGATCAGCTGCAGTATGCTGCCACAGACGCATTTGCTTCTTGGTATTTACACGAGGTATTATCAAATGACCCTTTTTTCTCTTTTTATGGTAATTTATTCAGAATTTATTCAAATCTTCATAATAAAAAAGATGTTTGAAATTACCATTTCAATTACCTAAAAACTATTGTTCACTCCCAGCGTTCTTTATCATTGTAACAATCTTAACCTCAGATCTTAAAAGGATTTCCACATGTTGAAAAAGTAGCAGATTCAGAGCCAATAGCGTGATGTTGCTGTTACGATAACATTCAATACTCGCCTTGAGATTGAAGGCTCGATTCACAGCTAAGTTATCCAATTGCTCTATTTAATCTTTTTGTTGAAATTGTTTCTTGGCTTAAGAAACTAAAATGATTAATTAATCTTAAGCAGCCATGTTATTTCTATTTTTCGTCACTGATTTTATGTTGAATTACAAATTGTCTATGAAATTAATGTCTAATAGGTCCTTGAAATTTCAGTTTTGTTGCATTAGGTCTTTTTAAAATTCATCACCCAGGTGACACTTATTTTAAAGTTTAATGTCTTATTAGACATAAAATTGTTAAATTTTTTTTTCTCTTTTGAATATATTAGAAACTTATCCATTAATCTTTTACGCTCTAAGTTTCAAAAGTTAGAGCCTATACATGTAAATTAACTTTATTTTTAATTAACCCAAATTGAATTAATTACAAAAGGAGTAGATTTATTTACTCTTGAACCCATAATGCATGGAGTTTAACAAAGGTGTAGCCGTTGAAAGCAATAAACACGAAAACGAGCCTTACATGAAACTGGAAAAGAAACACAATATTCTTACTTTGGCACAATGAGTCGGAATAAATAGAATATACATCTTTCCATTAATACCTTAAGGGCCAAGCCCACAATTCTAACTACAGCTATAAATTTTCAAG ATGGAATTTCGGGGCAGTAGCAACAGTAGCCATTCTTCGACGGAGCTCTCTGCATGCTCCTCATCTTTTCCGCCGTGGTCGTTCTCCGCATCGGAGTTCGATCAGCCGTTTACAGAGCAACAACTCCAAGCAATTGAGGCCATTGAAGCTGCTTATCAATCCACCAGCGCCAAAAAACGACGACCAAATTCCACGCCCGACGGAAACGAGGTCTCATGCGTTTCTCCCGACACCGGCCGTCGACTGCCTCGTTCCATTTTTTCTCATCAGTCTCCACGTTTTTCTCCCCTATCGCCCTGTCGAGTAAACTCGAAGATGAGGTTTCCTGCATTGAATTATGGTGGCCGAATTATTTACAGTAGAACTGTGAGTGAGGTCGATAGAGCGTCTAGGGAGCTAGCGAAGAAAATCAACTCCACGAGGAAAGCAATGGATCAAATTACTATTGGGTTCGACATCGAGTGGAGACCCTCATTTAAAAGAGGTGTTCCACCCGGAAAAGCAGCAGTTATGCAACTGTGCCTGGAAAATTCTGAATGCCATGTGATGCATATCATTCATTCGGGAATACCTCAAAGTTTGCAGGCTCTTCTAGAGGATGACACACTCAGCAAGGCTGGAGTTGGGATTGCCAGTGATGCTTCAAAAGTTTTTAAAGAGTATAATGTGTCTGTCAAACCATTGAACGAAATTTCAGATCTAGCTAATCAAAAGCTTGCTGGAGTTCCCAAAAAATGGGGTCTTCGGGCTCTAACTGAGACGCTTATATCAAAAGAGCTTCAAAAGCCCGACAGAATCAGACTTGGGAACTGGGAGGTGGCTGTGTTGTCAAAGGATCAGCTGCAGTATGCTGCCACAGACGCATTTGCTTCTTGGTATTTACACGAGATCTTAAAAGGATTTCCACATGTTGAAAAAGTAGCAGATTCAGAGCCAATAGCGTGA ATGGAATTTCGGGGCAGTAGCAACAGTAGCCATTCTTCGACGGAGCTCTCTGCATGCTCCTCATCTTTTCCGCCGTGGTCGTTCTCCGCATCGGAGTTCGATCAGCCGTTTACAGAGCAACAACTCCAAGCAATTGAGGCCATTGAAGCTGCTTATCAATCCACCAGCGCCAAAAAACGACGACCAAATTCCACGCCCGACGGAAACGAGGTCTCATGCGTTTCTCCCGACACCGGCCGTCGACTGCCTCGTTCCATTTTTTCTCATCAGTCTCCACGTTTTTCTCCCCTATCGCCCTGTCGAGTAAACTCGAAGATGAGGTTTCCTGCATTGAATTATGGTGGCCGAATTATTTACAGTAGAACTGTGAGTGAGGTCGATAGAGCGTCTAGGGAGCTAGCGAAGAAAATCAACTCCACGAGGAAAGCAATGGATCAAATTACTATTGGGTTCGACATCGAGTGGAGACCCTCATTTAAAAGAGGTGTTCCACCCGGAAAAGCAGCAGTTATGCAACTGTGCCTGGAAAATTCTGAATGCCATGTGATGCATATCATTCATTCGGGAATACCTCAAAGTTTGCAGGCTCTTCTAGAGGATGACACACTCAGCAAGGCTGGAGTTGGGATTGCCAGTGATGCTTCAAAAGTTTTTAAAGAGTATAATGTGTCTGTCAAACCATTGAACGAAATTTCAGATCTAGCTAATCAAAAGCTTGCTGGAGTTCCCAAAAAATGGGGTCTTCGGGCTCTAACTGAGACGCTTATATCAAAAGAGCTTCAAAAGCCCGACAGAATCAGACTTGGGAACTGGGAGGTGGCTGTGTTGTCAAAGGATCAGCTGCAGTATGCTGCCACAGACGCATTTGCTTCTTGGTATTTACACGAGATCTTAAAAGGATTTCCACATGTTGAAAAAGTAGCAGATTCAGAGCCAATAGCGTGA
BLAST of CSPI03G10600 vs. Swiss-Prot
Match: WEX_ARATH (Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX PE=1 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 4.5e-73 Identity = 143/284 (50.35%), Postives = 195/284 (68.66%), Query Frame = 1
BLAST of CSPI03G10600 vs. Swiss-Prot
Match: WRN_HUMAN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2) HSP 1 Score: 134.0 bits (336), Expect = 2.8e-30 Identity = 69/192 (35.94%), Postives = 114/192 (59.38%), Query Frame = 1
BLAST of CSPI03G10600 vs. Swiss-Prot
Match: WRN_XENLA (Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.7e-30 Identity = 66/193 (34.20%), Postives = 114/193 (59.07%), Query Frame = 1
BLAST of CSPI03G10600 vs. Swiss-Prot
Match: WRN_MOUSE (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus GN=Wrn PE=1 SV=3) HSP 1 Score: 129.8 bits (325), Expect = 5.2e-29 Identity = 68/191 (35.60%), Postives = 113/191 (59.16%), Query Frame = 1
BLAST of CSPI03G10600 vs. Swiss-Prot
Match: WRNXO_DROGR (Werner Syndrome-like exonuclease OS=Drosophila grimshawi GN=WRNexo PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.2e-17 Identity = 81/276 (29.35%), Postives = 131/276 (47.46%), Query Frame = 1
BLAST of CSPI03G10600 vs. TrEMBL
Match: A0A0A0L9B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129680 PE=4 SV=1) HSP 1 Score: 625.2 bits (1611), Expect = 4.4e-176 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 1
BLAST of CSPI03G10600 vs. TrEMBL
Match: A0A067L4A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01087 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 2.4e-81 Identity = 161/314 (51.27%), Postives = 220/314 (70.06%), Query Frame = 1
BLAST of CSPI03G10600 vs. TrEMBL
Match: U5FIR6_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0017s08590g PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 3.3e-78 Identity = 149/279 (53.41%), Postives = 198/279 (70.97%), Query Frame = 1
BLAST of CSPI03G10600 vs. TrEMBL
Match: V4RJL2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005507mg PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.0e-76 Identity = 147/280 (52.50%), Postives = 200/280 (71.43%), Query Frame = 1
BLAST of CSPI03G10600 vs. TrEMBL
Match: V4MI48_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025908mg PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76 Identity = 150/282 (53.19%), Postives = 204/282 (72.34%), Query Frame = 1
BLAST of CSPI03G10600 vs. TAIR10
Match: AT4G13870.2 (AT4G13870.2 Werner syndrome-like exonuclease) HSP 1 Score: 276.2 bits (705), Expect = 2.6e-74 Identity = 143/284 (50.35%), Postives = 195/284 (68.66%), Query Frame = 1
BLAST of CSPI03G10600 vs. TAIR10
Match: AT4G13885.1 (AT4G13885.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein) HSP 1 Score: 73.2 bits (178), Expect = 3.3e-13 Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 1
BLAST of CSPI03G10600 vs. TAIR10
Match: AT2G36110.1 (AT2G36110.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08 Identity = 43/176 (24.43%), Postives = 83/176 (47.16%), Query Frame = 1
BLAST of CSPI03G10600 vs. TAIR10
Match: AT1G56310.1 (AT1G56310.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07 Identity = 44/186 (23.66%), Postives = 83/186 (44.62%), Query Frame = 1
BLAST of CSPI03G10600 vs. TAIR10
Match: AT5G48350.1 (AT5G48350.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein) HSP 1 Score: 49.3 bits (116), Expect = 5.1e-06 Identity = 47/194 (24.23%), Postives = 83/194 (42.78%), Query Frame = 1
BLAST of CSPI03G10600 vs. NCBI nr
Match: gi|449432388|ref|XP_004133981.1| (PREDICTED: Werner Syndrome-like exonuclease isoform X1 [Cucumis sativus]) HSP 1 Score: 625.2 bits (1611), Expect = 6.4e-176 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 1
BLAST of CSPI03G10600 vs. NCBI nr
Match: gi|659075776|ref|XP_008438323.1| (PREDICTED: Werner Syndrome-like exonuclease [Cucumis melo]) HSP 1 Score: 578.6 bits (1490), Expect = 6.8e-162 Identity = 292/314 (92.99%), Postives = 302/314 (96.18%), Query Frame = 1
BLAST of CSPI03G10600 vs. NCBI nr
Match: gi|778677795|ref|XP_011650865.1| (PREDICTED: Werner Syndrome-like exonuclease isoform X2 [Cucumis sativus]) HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-110 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1
BLAST of CSPI03G10600 vs. NCBI nr
Match: gi|743897752|ref|XP_011042172.1| (PREDICTED: Werner Syndrome-like exonuclease [Populus euphratica]) HSP 1 Score: 317.4 bits (812), Expect = 2.8e-83 Identity = 159/292 (54.45%), Postives = 208/292 (71.23%), Query Frame = 1
BLAST of CSPI03G10600 vs. NCBI nr
Match: gi|802588809|ref|XP_012071088.1| (PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]) HSP 1 Score: 310.5 bits (794), Expect = 3.5e-81 Identity = 161/314 (51.27%), Postives = 220/314 (70.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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