CSPI03G09960 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAACATTCTCTCTAAAGCTTTCCAAAGGCTGAATTTCAAACAGACAATCTTCAATTTTTACAAGTCCATAAACAAAAAGATGCAAGCAGTTAGGGAGAAGCTACACGATATGAGCATCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGTGAGCTCTCGATGATGTTAGTTGTATTATTGAAAACATCTTCAATTCGAAAATATCATGAATACCTATTAATTGTTTTATCTTCCATAACTAGTACTGTTTTTTTTATCCCTTTCGATTGAGATATATAACAATCGAGATTCAAATAAAAATTTAATATCTACATCTCACATTCAAACTATCAACTTTTTTTTGTATAGAAATCATACACAATCTTTTCGTTTCTTTTTTTTTTTTGTATGTTTTCTAATTTTTTTATCAAATCCTCTCCAATATTTTTATTTTGTTCAATTATCTAAATTTCCTAATGAATTTACCACACATTCAAATGACTTTTTTAAATGGATATCGGGTGATTCACCATGTAATTTCTGTACAATCTCAAGTCATGCATCGTCCTAGTTGAGATCTCACCGAAAAAGCCCTATAGAGTAGTCATGCTAGTTATGACTATAGGAAAATGTCTTGCCCGAACAAAGATATTTGAGATTTGAACGATGAAATACAAGTTTTCATTTTATTTTAATGGTAAATGGGCAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGAAGTGGCTCATGAGGTAAGATTGGCACGAGAGGCTGAAGCTGCGATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTCACACCAATACCTTTGTGTCTCCTGGCGGAACCACCACCCTTCCTGATTACTCCGTACCAGTAGCTCCCGGCATGACTATGGTTGGAGCCCCTGGCACCGTCGACATGGCCGGAGCTCCTTCTCCCGTTAATAAGAAGTTATTGTAAAAAAAAGTTCTTGTGTAACGCCATGCATAAAAAGTTTCATCTTTTATTTGCAAATAATGTACTTTGATTTGTTTTCTTTTTTCTACAAAGTTCTATATTATTCTACCACATCTTTAGATGTTGTGTAGTATATATTATAATCAATACACACAATAGCATTTAAGATCCTATTTTCGTT ATGCAAGCAGTTAGGGAGAAGCTACACGATATGAGCATCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGAAGTGGCTCATGAGGTAAGATTGGCACGAGAGGCTGAAGCTGCGATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTCACACCAATACCTTTGTGTCTCCTGGCGGAACCACCACCCTTCCTGATTACTCCGTACCAGTAGCTCCCGGCATGACTATGGTTGGAGCCCCTGGCACCGTCGACATGGCCGGAGCTCCTTCTCCCGTTAATAAGAAGTTATTGTAA ATGCAAGCAGTTAGGGAGAAGCTACACGATATGAGCATCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGAAGTGGCTCATGAGGTAAGATTGGCACGAGAGGCTGAAGCTGCGATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAGATGGCTAAGTATGCTGATACTCACACCAATACCTTTGTGTCTCCTGGCGGAACCACCACCCTTCCTGATTACTCCGTACCAGTAGCTCCCGGCATGACTATGGTTGGAGCCCCTGGCACCGTCGACATGGCCGGAGCTCCTTCTCCCGTTAATAAGAAGTTATTGTAA
BLAST of CSPI03G09960 vs. TrEMBL
Match: A0A0A0L6I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127070 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 3.3e-55 Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 1
BLAST of CSPI03G09960 vs. TrEMBL
Match: B9IB39_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s17700g PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.1e-18 Identity = 56/76 (73.68%), Postives = 67/76 (88.16%), Query Frame = 1
BLAST of CSPI03G09960 vs. TrEMBL
Match: B9SKJ7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0659670 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 7.3e-18 Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = 1
BLAST of CSPI03G09960 vs. TrEMBL
Match: A0A072TZA1_MEDTR (Late embryogenesis abundant protein OS=Medicago truncatula GN=MTR_7g034335 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17 Identity = 53/76 (69.74%), Postives = 68/76 (89.47%), Query Frame = 1
BLAST of CSPI03G09960 vs. TrEMBL
Match: V4U983_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023977mg PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17 Identity = 58/90 (64.44%), Postives = 72/90 (80.00%), Query Frame = 1
BLAST of CSPI03G09960 vs. TAIR10
Match: AT1G32560.1 (AT1G32560.1 Late embryogenesis abundant protein, group 1 protein) HSP 1 Score: 51.2 bits (121), Expect = 5.2e-07 Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 1
BLAST of CSPI03G09960 vs. NCBI nr
Match: gi|449433139|ref|XP_004134355.1| (PREDICTED: uncharacterized protein LOC101219295 [Cucumis sativus]) HSP 1 Score: 222.2 bits (565), Expect = 4.8e-55 Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 1
BLAST of CSPI03G09960 vs. NCBI nr
Match: gi|659075595|ref|XP_008438228.1| (PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]) HSP 1 Score: 208.8 bits (530), Expect = 5.5e-51 Identity = 115/123 (93.50%), Postives = 118/123 (95.93%), Query Frame = 1
BLAST of CSPI03G09960 vs. NCBI nr
Match: gi|1009110461|ref|XP_015895645.1| (PREDICTED: uncharacterized protein LOC107429466 [Ziziphus jujuba]) HSP 1 Score: 102.8 bits (255), Expect = 4.2e-19 Identity = 64/104 (61.54%), Postives = 78/104 (75.00%), Query Frame = 1
BLAST of CSPI03G09960 vs. NCBI nr
Match: gi|743932890|ref|XP_011010743.1| (PREDICTED: uncharacterized protein LOC105115528 [Populus euphratica]) HSP 1 Score: 102.4 bits (254), Expect = 5.6e-19 Identity = 58/81 (71.60%), Postives = 72/81 (88.89%), Query Frame = 1
BLAST of CSPI03G09960 vs. NCBI nr
Match: gi|224132066|ref|XP_002321247.1| (hypothetical protein POPTR_0014s17700g [Populus trichocarpa]) HSP 1 Score: 100.9 bits (250), Expect = 1.6e-18 Identity = 56/76 (73.68%), Postives = 67/76 (88.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |