CSPI03G06110 (gene) Wild cucumber (PI 183967)

NameCSPI03G06110
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionHrpN-interacting protein from Malus
LocationChr3 : 5257399 .. 5260717 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTGATCACCTGGCATGGGAAATCGCCACAAGTCATCAATAGAAAATCAACTTTAAAAGATATGGCAATTTTTCCTCCAACACAAAAGCTTATCAAGTCGCCTCCCTTCATCTTCACTTCTCTCAACAATGTATGATGGACTATCAAACTGCTGAATACCATGTTCTCTAACTAGTATGGAGTCTGCTTATATTCAACCTTGTCTTGTTTGTATTTGCAACCACAAGTATTTTGAAACGTGTTGACATTTTTAAATTAGTCTTGCATAACATAAATAAAGATTCAATCATTTACAGATCTTCAAGAAAAAACAATAAAAATCAGTAAAAGCATTCGATTTTTTCTCACAAGACTCACTCATAAACATCTCTCTAGGTTCGGCTAGCTCATAAGTGTCTTGCTAGTCTCGCCAGAATCACTCACAAATTCAACCTCAATTCTACGGACCAAAAGCCAGAAAAATGGAACAGCAAACCATATGGATTCCTTAACCAAGAACGACATTCAAAAAAAAGAAAAAAAAATTCAAAACATAGTCAGACATAAGCGAGATGGTTGGAATGTGGAATACTGAGATGAGCGAAACAAAGTCGTTTCATTTTTCGGTGTTCTTGATTTTAGGGTGTTTTTGGTGTTTTTGTTTCGCAAAAGGTTAGGGCAATTTGGTAATTTCATTTTCTAAGTGATGTATCAATTTGCATTTTCTAAAAAAAAGGGTCATTTCCCAAATTGGACCGTAGTATTTCAGTATTTCTAATTCAGCCTCCCTCCCCAGCTACTGCATCCCCTCCGCCGCACGCAGCAGTCCGCCGCCGCCCCTCCTACCTGAAACGGTCTCACCGTCTGCACCGCATCTCTCTCCCTCTCACACTCTCACCTCTCCCTGAAATCGCAGTTATTTAAACTCTCTCAGTCCCCAACCCCTGCTGTTGGTAAGATCGCGCCACCCCTCATTTTTCATATCCACCCTAGTGTTTTCCTTCTTTCTTTTCTCTTTTTGTTGTTTCATTGATTTATTCTCTTCACCCGCCTAGTATAAAACCAAAATTAGTATTGATTATTGTTATAATTATTTTGTTGATTTCTTCTTCCACCAATGTTCAGTCAGTCCAAATGAATACATTAAAACTAAAATGCTTCAGAGTTTTCTTGAATATAGAACAAACTATCGAGGGATAACTGGTGTGAGGAGGGCGTATAGTTCTTTCTTGAATATAGAAGAATCATTTGAAATTGTCCCAAATTCAGGGGTTCCAATTAGTAAAACCTAAAACTTGAACCCTATGTTCTTTGACCCTTTTGGAGGCTCGATTCTCTGAGTGTTGTAACTGTTAAAATTAGCTATTTGCTCAATGTTTGCAGAAGGATATGGGAGGCAGAGGAGTCATTGGTGACAAATGGTCGACGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTAAGCACTTTTAGTTTTGACATATTTGGGAGTGATTTTGAAATGGATTAAATCATGTAATCCCTCTTCAACGTGTTTTTAGTCATTCAAAATCAATATTGACAGTATGTTGATTTGAATGATTAAATGCATGTTTGAAGTAATTTTCAATTTTCTTATAGCATGATGTTTTTTTGCTCCGGCAAAGTGGAATTCTTCTCTACTCTTAATAACATTCTAGGGTTCTTTGAGGTGATGTCAGGACTTAGAATTAATAAAAAAGCCAGATTTTGGGTATAAAGTAGGAAAAGCTTAATAGATGCGCGAATTTGGTTGGTTGTGATTTGTGACTTGGTTCCTTTCCTTCTTCCTACCCGTGGTCTCCCCCTCCAGGGTAATACGAGAGCTATCCCTTTTTGGGATGCTTCGGGGAGAAGATAAGGAAGAGGTTAGCTTCATGGAAAAAAAAATCTTCTCTAAAGTTGGGAGGTTAATGCTTATTAGATTGGGATTGGGGGGGAGCTTGAAAATTCAAGGTTACGCAACAAAGCTCTGTTATTTAACTGGTTGTGGGCCTGAATTCTTGTGGCAAAGGTTTATCGTGAGCAAACATGGTCACCATTCCTTTGAGTGTGTGGCGAAAGGGGTCAAAGGCACGCACCAAAATTTTTGGAAAGATATTGCTATTCAACTCCCTTCTTTTTTCTATCTTGTCATTTGTGTTGTGGGAGATTGGAAGAAAACATTTTCTTTTTTTGGGAAGATCAGTAGGTGGGGGATAGGCCCTTCTCATTTGTGTTTTCTGGGTTATATCATTTGTTCACTCTGAAAAATGGTCTTGTATCGGACTTTTTTATTTGGTTGGGAAATTATGTTTCTCCCTTTTGGTTCCTGTCAGTCATTGTCCAATAGGGAAACAATGGAGGTGGGCTCTCTTATTCCTGATTGAGGGTTTTGTCTATAGGCTGAGAGAAGGGATGTTCGTGTATGGACTTCTAACCCTTTAGAGGGCTTTTATTGTAAGTCATTCTTTAGGATTTTATTAGATCTCTCTCTTGTGGTTGAGTCAGTCTTTGATGTTTTCTTTACGAAGGATTAAGATTCCAAAGAAAGACAAGTTCTTTTTGTATCAAGTTTTGCTTGGTCGTGTGAATAAGATGCCTTTGTTGATGGGTTCTTCTTGATGTATCCTTTGTCATAAAGCAGATGGAAATGTAGATCACTTTATCTACAAATGTCAGTTTGTGAGATCTATTTCGGACAGTTTTTTGCAGGAGTTTGTTTTTTACTGTTTGTCAGAGGAATGCTCGGTTAGTGATTGGGGAGTTCTCCTCCATTGGCATTTCAAAGAGAAAGTTCATTCTCTTTGGTTTATGGAGGTGTGTGCTTTATTATAGGACCTTTTGGGGGAGAGGAACAATAGAGTGTTTCAAGAGGGACCCAGCAAGGTTTGGTCTTTGGTGAGGTTTCACGTTTCTCAATAGGCTTCATTGCTACAGTTTTACAGACTTATTGTAATCTTGCCTAGGCAATTTCTTACCTAGATGCAAACCCTTACTTTTAGTAGGGACTTTTTGTGGGCTTGGTTTTTGTATGCCCGTGTATTCTTTCATTTTTTTTTCAAAATAAAAGCAGTTTCTATTTTTAAAAAAATCATGCCCAAATATGCTATACTTTCTAAGTAAATCTTTTGCATGAAGTTTTCATCTAATTAATTAAGAGTAACATTCTTTATCTTCATAAAGGTAACAAGCTTCCTAATTTGACAATTATTGTCGCTTGTCTAGGTATGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGACTGAGAGTCTTAAAGACGTTGAATCTGGAGGAAATGTTGAAAATGTTTAG

mRNA sequence

ATGATCTTGATCACCTGGCATGGGAAATCGCCACAAGTCATCAATAGAAAATCAACTTTAAAAGATATGGCAATTTTTCCTCCAACACAAAAGCTTATCAAGTCGCCTCCCTTCATCTTCACTTCTCTCAACAATGGTGTTTTTGGTGTTTTTGTTTCGCAAAAGCCTCCCTCCCCAGCTACTGCATCCCCTCCGCCGCACGCAGCAGTCCGCCGCCGCCCCTCCTACCTGAAACGGTCTCACCGTCTGCACCGCATCTCTCTCCCTCTCACACTCTCACCTCTCCCTGAAATCGCAAGTTTTCTTGAATATAGAACAAACTATCGAGGGATAACTGGTGTGAGGAGGGCGTATAGTTCTTTCTTGAATATAGAAGAATCATTTGAAATTGTCCCAAATTCAGGGAAGGATATGGGAGGCAGAGGAGTCATTGGTGACAAATGGTCGACGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTATGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGACTGAGAGTCTTAAAGACGTTGAATCTGGAGGAAATGTTGAAAATGTTTAG

Coding sequence (CDS)

ATGATCTTGATCACCTGGCATGGGAAATCGCCACAAGTCATCAATAGAAAATCAACTTTAAAAGATATGGCAATTTTTCCTCCAACACAAAAGCTTATCAAGTCGCCTCCCTTCATCTTCACTTCTCTCAACAATGGTGTTTTTGGTGTTTTTGTTTCGCAAAAGCCTCCCTCCCCAGCTACTGCATCCCCTCCGCCGCACGCAGCAGTCCGCCGCCGCCCCTCCTACCTGAAACGGTCTCACCGTCTGCACCGCATCTCTCTCCCTCTCACACTCTCACCTCTCCCTGAAATCGCAAGTTTTCTTGAATATAGAACAAACTATCGAGGGATAACTGGTGTGAGGAGGGCGTATAGTTCTTTCTTGAATATAGAAGAATCATTTGAAATTGTCCCAAATTCAGGGAAGGATATGGGAGGCAGAGGAGTCATTGGTGACAAATGGTCGACGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTATGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGACTGAGAGTCTTAAAGACGTTGAATCTGGAGGAAATGTTGAAAATGTTTAG
BLAST of CSPI03G06110 vs. TrEMBL
Match: A0A0A0L386_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104860 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.7e-91
Identity = 177/196 (90.31%), Postives = 181/196 (92.35%), Query Frame = 1

Query: 1   MILITWHGKSPQVINRKSTLKDMAIFPPTQKLIKSPPFIFTSLNNGVFGVFVSQKPPSPA 60
           MILITWHGKSPQVINRKST KDMAIF PTQKLIKSPPFIFTSLNNGVFGVFVSQK PSPA
Sbjct: 1   MILITWHGKSPQVINRKSTSKDMAIFAPTQKLIKSPPFIFTSLNNGVFGVFVSQKRPSPA 60

Query: 61  TASPPPHAAVRRRPSYLKRSHRLHRISLPLTLSPLPEIASFLEYRTNYRGITGVRRAYSS 120
           TASPPPHAAVRRRPSYLK+SHRLHRISLPLTLSPLPEIA+ L  R N+        AYSS
Sbjct: 61  TASPPPHAAVRRRPSYLKQSHRLHRISLPLTLSPLPEIANKLS-RDNW-----CEEAYSS 120

Query: 121 FLNIEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRML 180
           FL+IEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRML
Sbjct: 121 FLSIEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRML 180

Query: 181 TESLKDVESGGNVENV 197
           TESLKDVESGGNVENV
Sbjct: 181 TESLKDVESGGNVENV 190

BLAST of CSPI03G06110 vs. TrEMBL
Match: A0A061FEK1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031418 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.3e-15
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV 197
           MG RGVIGDKWS R+LWVCA+GS IG+YMVA ERQ QNR +M+ ESLK +ES G+ E V
Sbjct: 1   MGTRGVIGDKWSMRILWVCAIGSAIGLYMVAVERQKQNRDKMMAESLKAIESEGSGEQV 59

BLAST of CSPI03G06110 vs. TrEMBL
Match: B9N1I8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41230g PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-14
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLK--DVESG 191
           MGGRGVIGDKWS+RVLW CA+GSV+ +YMV  ERQLQNR+RM+ E LK  D ESG
Sbjct: 1   MGGRGVIGDKWSSRVLWACAIGSVVSLYMVVVERQLQNRERMMAEGLKNIDAESG 55

BLAST of CSPI03G06110 vs. TrEMBL
Match: A0A0L9U7A6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g202300 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.9e-14
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGN 193
           MG RGVIGDKWS R+LW CA+GS +G+YMVA ERQ QNR RML E L+  ESGG+
Sbjct: 1   MGTRGVIGDKWSMRILWACAIGSAVGLYMVAVERQTQNRARMLAEELRATESGGS 55

BLAST of CSPI03G06110 vs. TrEMBL
Match: W9R8T7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025653 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.3e-13
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVES 190
           M GRGVIGDKWS R+LW CA+GS IG+YMVA ERQ+QNR RML ES K ++S
Sbjct: 1   MSGRGVIGDKWSMRILWACAIGSAIGLYMVAAERQMQNRNRMLAESFKAMDS 52

BLAST of CSPI03G06110 vs. TAIR10
Match: AT3G15395.1 (AT3G15395.1 unknown protein)

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV 197
           MG RG+I DKWS R+LW CA+GS IG+YMVA ERQ QNR R + ESL+  ES G+ +NV
Sbjct: 1   MGSRGIINDKWSMRILWGCAIGSAIGLYMVAVERQTQNRARAMAESLRAAESQGDGDNV 59

BLAST of CSPI03G06110 vs. NCBI nr
Match: gi|700201100|gb|KGN56233.1| (hypothetical protein Csa_3G104860 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 3.9e-91
Identity = 177/196 (90.31%), Postives = 181/196 (92.35%), Query Frame = 1

Query: 1   MILITWHGKSPQVINRKSTLKDMAIFPPTQKLIKSPPFIFTSLNNGVFGVFVSQKPPSPA 60
           MILITWHGKSPQVINRKST KDMAIF PTQKLIKSPPFIFTSLNNGVFGVFVSQK PSPA
Sbjct: 1   MILITWHGKSPQVINRKSTSKDMAIFAPTQKLIKSPPFIFTSLNNGVFGVFVSQKRPSPA 60

Query: 61  TASPPPHAAVRRRPSYLKRSHRLHRISLPLTLSPLPEIASFLEYRTNYRGITGVRRAYSS 120
           TASPPPHAAVRRRPSYLK+SHRLHRISLPLTLSPLPEIA+ L  R N+        AYSS
Sbjct: 61  TASPPPHAAVRRRPSYLKQSHRLHRISLPLTLSPLPEIANKLS-RDNW-----CEEAYSS 120

Query: 121 FLNIEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRML 180
           FL+IEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRML
Sbjct: 121 FLSIEESFEIVPNSGKDMGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRML 180

Query: 181 TESLKDVESGGNVENV 197
           TESLKDVESGGNVENV
Sbjct: 181 TESLKDVESGGNVENV 190

BLAST of CSPI03G06110 vs. NCBI nr
Match: gi|449431830|ref|XP_004133703.1| (PREDICTED: uncharacterized protein LOC101203530 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV 197
           MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV
Sbjct: 1   MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV 59

BLAST of CSPI03G06110 vs. NCBI nr
Match: gi|659102695|ref|XP_008452266.1| (PREDICTED: uncharacterized protein LOC103493339 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 6.0e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV 197
           MGGRGVIGDKWS+RVLW+CALGS IGMYMVAQER+LQNRQRMLTESLKDVESGGNVENV
Sbjct: 1   MGGRGVIGDKWSSRVLWLCALGSAIGMYMVAQERRLQNRQRMLTESLKDVESGGNVENV 59

BLAST of CSPI03G06110 vs. NCBI nr
Match: gi|590608886|ref|XP_007021389.1| (Uncharacterized protein TCM_031418 [Theobroma cacao])

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV 197
           MG RGVIGDKWS R+LWVCA+GS IG+YMVA ERQ QNR +M+ ESLK +ES G+ E V
Sbjct: 1   MGTRGVIGDKWSMRILWVCAIGSAIGLYMVAVERQKQNRDKMMAESLKAIESEGSGEQV 59

BLAST of CSPI03G06110 vs. NCBI nr
Match: gi|702377778|ref|XP_010062881.1| (PREDICTED: uncharacterized protein LOC104450139 [Eucalyptus grandis])

HSP 1 Score: 87.8 bits (216), Expect = 2.3e-14
Identity = 44/60 (73.33%), Postives = 46/60 (76.67%), Query Frame = 1

Query: 138 MGGRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESG-GNVENV 197
           MGGRGVIGDKWS R+LW CALGSVI  YMVA ERQ QNR RML ESL   ESG G+ E V
Sbjct: 1   MGGRGVIGDKWSMRILWACALGSVISFYMVAVERQTQNRDRMLAESLNSTESGVGSGEEV 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L386_CUCSA2.7e-9190.31Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104860 PE=4 SV=1[more]
A0A061FEK1_THECC9.3e-1569.49Uncharacterized protein OS=Theobroma cacao GN=TCM_031418 PE=4 SV=1[more]
B9N1I8_POPTR4.6e-1472.73Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41230g PE=4 SV=1[more]
A0A0L9U7A6_PHAAN7.9e-1469.09Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g202300 PE=4 SV=1[more]
W9R8T7_9ROSA2.3e-1371.15Uncharacterized protein OS=Morus notabilis GN=L484_025653 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G15395.15.8e-1662.71 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700201100|gb|KGN56233.1|3.9e-9190.31hypothetical protein Csa_3G104860 [Cucumis sativus][more]
gi|449431830|ref|XP_004133703.1|1.1e-24100.00PREDICTED: uncharacterized protein LOC101203530 [Cucumis sativus][more]
gi|659102695|ref|XP_008452266.1|6.0e-2393.22PREDICTED: uncharacterized protein LOC103493339 [Cucumis melo][more]
gi|590608886|ref|XP_007021389.1|1.3e-1469.49Uncharacterized protein TCM_031418 [Theobroma cacao][more]
gi|702377778|ref|XP_010062881.1|2.3e-1473.33PREDICTED: uncharacterized protein LOC104450139 [Eucalyptus grandis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0008284 positive regulation of cell proliferation
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G06110.1CSPI03G06110.1mRNA


The following gene(s) are paralogous to this gene:

None