CSPI02G21240 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAGCTTTGGTTGAGTCCGCTTTATCTAAATTAATGGGAAAAGTTGACACCTCCATTGGTAAATTATTCTTGTTGAGTAACATCAAGGATGAATCATGTCGAAGATTGTTACATTTATCACAAAGGTAAAATTTTCAATTTATTTAATTATGTCTTTAGTCATATGTTTGAAATGATTTTCTAATTTTATTAAAATTGATTTACGTTTATAGTTTGAGTCCTCCAACTCTTAGTGCTCTAGCTTTGGCTGCTACAGTAAAAAGTCTTGAGAAAGATAATCAACAGCTTAAGAGGCTACTCCATACAACTAAAGGGGAGGTTAATTCCTGATTTATATATATACTATATGTATTGGATTCTATTAGGTCGATATAATGGTGAAGTAAAAGTGTAATTTGAGAAATTAGGGTATGTGTAAAATAGTAGTTCTAAACTTTTTTCAAATAAGATTGGTATAACTCTTGTTCCAAGATACTATCGGCTGATCATTGTTGATTAGGGCAATGAGCCACATCTTATGCCTAGTCATGAAAAGGGATGATAATTGGTTTTCTTTTTAATTTTAAACATAAAGCTCTATTAATGGATAATTAACTTATAAATCAGGTAGAAGAATTTAGAATTTAGTCTTACTGTTTTGATAAATCTTTTTAAATAATTTAATTTTGTTTTCCATATTGATTTACAATTTAACCGAAAAGATTTGAGTTTAAATTTAGTATTGGGATTTAAAATTCACTTCAACTATCAAGGAACTATATTTAATCACAATTTTTTTTAAAAAATGTAAATAATTAATTAAAAGATTTTTATTTAGTTAATTTCACCCTCTCTTCTTCACAATTATATTTATTTTTATCCAATTTTTGTGAAGGTTAAACTGCTATCCAATCAAATTGGTTATCTCATCGAGGAGCAAACGACGCCGTACCATAATATCAATGGAGGAGGAATTCCTAAACCACCAGCTGGCAGTTCCTCTGTGAAGGTTAAGAAAACTAAATGCACAATTATTAATTTCTACAACCAATATTTCATAATTGTTCTCTTTTCTTTTTGTATTATTATAATTTATATGTCAAGTTTTTGTTTAAATAACCATGAATTTATTTATATGTATGTGTGTGTGTGTGTGTGAATGGGGTTTGATCCTTTTGCATGCAGGTGCGTGAAAAGAAAAGACCATTGTTGGAGGATTGA ATGGAAGAAGCTTTGGTTGAGTCCGCTTTATCTAAATTAATGGGAAAAGTTGACACCTCCATTGGTAAATTATTCTTGTTGAGTAACATCAAGGATGAATCATGTCGAAGATTGTTACATTTATCACAAAGTTTGAGTCCTCCAACTCTTAGTGCTCTAGCTTTGGCTGCTACAGTAAAAAGTCTTGAGAAAGATAATCAACAGCTTAAGAGGCTACTCCATACAACTAAAGGGGAGGTTAAACTGCTATCCAATCAAATTGGTTATCTCATCGAGGAGCAAACGACGCCGTACCATAATATCAATGGAGGAGGAATTCCTAAACCACCAGCTGGCAGTTCCTCTGTGAAGGTGCGTGAAAAGAAAAGACCATTGTTGGAGGATTGA ATGGAAGAAGCTTTGGTTGAGTCCGCTTTATCTAAATTAATGGGAAAAGTTGACACCTCCATTGGTAAATTATTCTTGTTGAGTAACATCAAGGATGAATCATGTCGAAGATTGTTACATTTATCACAAAGTTTGAGTCCTCCAACTCTTAGTGCTCTAGCTTTGGCTGCTACAGTAAAAAGTCTTGAGAAAGATAATCAACAGCTTAAGAGGCTACTCCATACAACTAAAGGGGAGGTTAAACTGCTATCCAATCAAATTGGTTATCTCATCGAGGAGCAAACGACGCCGTACCATAATATCAATGGAGGAGGAATTCCTAAACCACCAGCTGGCAGTTCCTCTGTGAAGGTGCGTGAAAAGAAAAGACCATTGTTGGAGGATTGA
BLAST of CSPI02G21240 vs. TrEMBL
Match: A0A0A0LNW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G369160 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 5.1e-62 Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 1
BLAST of CSPI02G21240 vs. TrEMBL
Match: A0A061FFR9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034839 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.5e-08 Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 1
BLAST of CSPI02G21240 vs. TrEMBL
Match: W9REI7_9ROSA (28 kDa ribonucleoprotein OS=Morus notabilis GN=L484_013185 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07 Identity = 47/135 (34.81%), Postives = 66/135 (48.89%), Query Frame = 1
BLAST of CSPI02G21240 vs. TrEMBL
Match: A0A0B0PG99_GOSAR (Protein hook OS=Gossypium arboreum GN=F383_01412 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-07 Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = 1
BLAST of CSPI02G21240 vs. TrEMBL
Match: K7M7Q6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G177700 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-07 Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 1
BLAST of CSPI02G21240 vs. TAIR10
Match: AT4G09060.2 (AT4G09060.2 unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 3.8e-08 Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 1
BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|700207595|gb|KGN62714.1| (hypothetical protein Csa_2G369160 [Cucumis sativus]) HSP 1 Score: 245.0 bits (624), Expect = 7.3e-62 Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 1
BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|659088212|ref|XP_008444861.1| (PREDICTED: uncharacterized protein LOC103488082 [Cucumis melo]) HSP 1 Score: 171.8 bits (434), Expect = 7.9e-40 Identity = 94/129 (72.87%), Postives = 110/129 (85.27%), Query Frame = 1
BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|590597715|ref|XP_007018691.1| (Uncharacterized protein TCM_034839 [Theobroma cacao]) HSP 1 Score: 65.5 bits (158), Expect = 8.0e-08 Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 1
BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|703115895|ref|XP_010101007.1| (28 kDa ribonucleoprotein [Morus notabilis]) HSP 1 Score: 64.3 bits (155), Expect = 1.8e-07 Identity = 47/135 (34.81%), Postives = 66/135 (48.89%), Query Frame = 1
BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|728846035|gb|KHG25478.1| (Protein hook [Gossypium arboreum]) HSP 1 Score: 63.9 bits (154), Expect = 2.3e-07 Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |