CSPI02G21240 (gene) Wild cucumber (PI 183967)

NameCSPI02G21240
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBEST plant protein match is: (TAIR:plant.1) protein, putative
LocationChr2 : 18641426 .. 18642631 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGCTTTGGTTGAGTCCGCTTTATCTAAATTAATGGGAAAAGTTGACACCTCCATTGGTAAATTATTCTTGTTGAGTAACATCAAGGATGAATCATGTCGAAGATTGTTACATTTATCACAAAGGTAAAATTTTCAATTTATTTAATTATGTCTTTAGTCATATGTTTGAAATGATTTTCTAATTTTATTAAAATTGATTTACGTTTATAGTTTGAGTCCTCCAACTCTTAGTGCTCTAGCTTTGGCTGCTACAGTAAAAAGTCTTGAGAAAGATAATCAACAGCTTAAGAGGCTACTCCATACAACTAAAGGGGAGGTTAATTCCTGATTTATATATATACTATATGTATTGGATTCTATTAGGTCGATATAATGGTGAAGTAAAAGTGTAATTTGAGAAATTAGGGTATGTGTAAAATAGTAGTTCTAAACTTTTTTCAAATAAGATTGGTATAACTCTTGTTCCAAGATACTATCGGCTGATCATTGTTGATTAGGGCAATGAGCCACATCTTATGCCTAGTCATGAAAAGGGATGATAATTGGTTTTCTTTTTAATTTTAAACATAAAGCTCTATTAATGGATAATTAACTTATAAATCAGGTAGAAGAATTTAGAATTTAGTCTTACTGTTTTGATAAATCTTTTTAAATAATTTAATTTTGTTTTCCATATTGATTTACAATTTAACCGAAAAGATTTGAGTTTAAATTTAGTATTGGGATTTAAAATTCACTTCAACTATCAAGGAACTATATTTAATCACAATTTTTTTTAAAAAATGTAAATAATTAATTAAAAGATTTTTATTTAGTTAATTTCACCCTCTCTTCTTCACAATTATATTTATTTTTATCCAATTTTTGTGAAGGTTAAACTGCTATCCAATCAAATTGGTTATCTCATCGAGGAGCAAACGACGCCGTACCATAATATCAATGGAGGAGGAATTCCTAAACCACCAGCTGGCAGTTCCTCTGTGAAGGTTAAGAAAACTAAATGCACAATTATTAATTTCTACAACCAATATTTCATAATTGTTCTCTTTTCTTTTTGTATTATTATAATTTATATGTCAAGTTTTTGTTTAAATAACCATGAATTTATTTATATGTATGTGTGTGTGTGTGTGTGAATGGGGTTTGATCCTTTTGCATGCAGGTGCGTGAAAAGAAAAGACCATTGTTGGAGGATTGA

mRNA sequence

ATGGAAGAAGCTTTGGTTGAGTCCGCTTTATCTAAATTAATGGGAAAAGTTGACACCTCCATTGGTAAATTATTCTTGTTGAGTAACATCAAGGATGAATCATGTCGAAGATTGTTACATTTATCACAAAGTTTGAGTCCTCCAACTCTTAGTGCTCTAGCTTTGGCTGCTACAGTAAAAAGTCTTGAGAAAGATAATCAACAGCTTAAGAGGCTACTCCATACAACTAAAGGGGAGGTTAAACTGCTATCCAATCAAATTGGTTATCTCATCGAGGAGCAAACGACGCCGTACCATAATATCAATGGAGGAGGAATTCCTAAACCACCAGCTGGCAGTTCCTCTGTGAAGGTGCGTGAAAAGAAAAGACCATTGTTGGAGGATTGA

Coding sequence (CDS)

ATGGAAGAAGCTTTGGTTGAGTCCGCTTTATCTAAATTAATGGGAAAAGTTGACACCTCCATTGGTAAATTATTCTTGTTGAGTAACATCAAGGATGAATCATGTCGAAGATTGTTACATTTATCACAAAGTTTGAGTCCTCCAACTCTTAGTGCTCTAGCTTTGGCTGCTACAGTAAAAAGTCTTGAGAAAGATAATCAACAGCTTAAGAGGCTACTCCATACAACTAAAGGGGAGGTTAAACTGCTATCCAATCAAATTGGTTATCTCATCGAGGAGCAAACGACGCCGTACCATAATATCAATGGAGGAGGAATTCCTAAACCACCAGCTGGCAGTTCCTCTGTGAAGGTGCGTGAAAAGAAAAGACCATTGTTGGAGGATTGA
BLAST of CSPI02G21240 vs. TrEMBL
Match: A0A0A0LNW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G369160 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.1e-62
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 1

Query: 1   MEEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60
           MEEAL+ESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK
Sbjct: 1   MEEALIESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60

Query: 61  SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQTTPYHNINGGGIPKPPAGSSSVKVRE 120
           SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQTTPYHNINGGGIPKPPAGSSSVKVRE
Sbjct: 61  SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQTTPYHNINGGGIPKPPAGSSSVKVRE 120

Query: 121 KKRPLLED 129
           KKRPLLED
Sbjct: 121 KKRPLLED 128

BLAST of CSPI02G21240 vs. TrEMBL
Match: A0A061FFR9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034839 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.5e-08
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 1

Query: 1   MEEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60
           +EE L+ES L+ L+ K +   G+ FL +N   ESC++L+ +   L P T   L+LAA +K
Sbjct: 165 VEENLLESMLATLICKDEVMSGRAFLEANNSLESCQKLITMWHRLRPSTKKVLSLAAELK 224

Query: 61  SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQ---TTPYH---NINGGGIPKPPAGSS 120
           +LEKD + L+  L+  + EVK+L  +   L EE       YH   N++G G     +GS+
Sbjct: 225 ALEKDKEHLRINLNKAEEEVKVLFEENNILDEENKRLLMQYHKEKNLHGSG--GKHSGSA 284

Query: 121 SVKVREKK 123
           S K  ++K
Sbjct: 285 SAKTNKRK 290

BLAST of CSPI02G21240 vs. TrEMBL
Match: W9REI7_9ROSA (28 kDa ribonucleoprotein OS=Morus notabilis GN=L484_013185 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07
Identity = 47/135 (34.81%), Postives = 66/135 (48.89%), Query Frame = 1

Query: 2   EEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVKS 61
           +++L+ES L+ L+   D   G  FL +N   ESC RLL +   L P T   L+LAA  K+
Sbjct: 166 QDSLLESVLATLISGDDAVPGHAFLEANSSHESCLRLLEMWNFLKPSTQKVLSLAAEFKA 225

Query: 62  LEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEE---------QTTPYHNINGGGIPKPPAG 121
           LEKD + L+  L+  + EVKLL  +   L EE         +    H  +G      PA 
Sbjct: 226 LEKDKEHLRTNLYRAEEEVKLLFEENNMLDEENKKLLMKFNKERNQHGSSGKHASSAPAK 285

Query: 122 SSSVKVREKKRPLLE 128
           S+  K   K   L+E
Sbjct: 286 SNKRKSSSKTSSLIE 300

BLAST of CSPI02G21240 vs. TrEMBL
Match: A0A0B0PG99_GOSAR (Protein hook OS=Gossypium arboreum GN=F383_01412 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-07
Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = 1

Query: 1   MEEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60
           +EE L+ES LS L+ K +   G+ FL +N   E+C+++L +   L P T   L+LAA VK
Sbjct: 165 LEENLLESVLSTLISKDEVMCGRAFLEANNSLEACQKMLKMWNRLRPSTRKILSLAAEVK 224

Query: 61  SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQ---TTPYH-NINGGGIPKPPAGSSSV 120
           +LEKD + L+  L   + EVK+L  +   L E        YH   N  G     +GS+S 
Sbjct: 225 TLEKDKEHLRMNLCKAEDEVKVLFEENNILDEANKRLLRQYHKEKNLHGSDGKHSGSAST 284

Query: 121 KVREKK 123
           K  ++K
Sbjct: 285 KTNKRK 290

BLAST of CSPI02G21240 vs. TrEMBL
Match: K7M7Q6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G177700 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-07
Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 1

Query: 2   EEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVKS 61
           EE L++S L+ +    D S    FL +N ++E C ++L +   L P T   L L A VKS
Sbjct: 164 EENLLDSLLATVTTTTDESSTYAFLSANSENEHCEKMLTMWNCLKPSTRRVLCLVAEVKS 223

Query: 62  LEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQTT-------PYHNINGGGIPKPPAGSS 121
           LE D + L+  LH  + EVKLL ++   L EE            H+ +GG     P GS+
Sbjct: 224 LENDKENLRVNLHRAEEEVKLLFDENSVLDEENKRLAKRCKGRNHSSSGG----KPTGSA 283

Query: 122 SVKVREKK 123
           SVK  ++K
Sbjct: 284 SVKSNKRK 287

BLAST of CSPI02G21240 vs. TAIR10
Match: AT4G09060.2 (AT4G09060.2 unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 3.8e-08
Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 1

Query: 1   MEEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60
           +EE L++S L  L+ K +T +G+LFL +NI D+SC+ LL     L P T   L+L +  K
Sbjct: 205 LEEDLLDSVLGSLISKDETIMGRLFLEANIHDQSCQALLSKWDHLKPSTQKVLSLVSKAK 264

Query: 61  SLEKDNQQLKRLLHTTKGEVKLLS 85
             EK+ + +   L   + EV+L+S
Sbjct: 265 KFEKEKECIIMNLAKAEQEVELVS 288

BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|700207595|gb|KGN62714.1| (hypothetical protein Csa_2G369160 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 7.3e-62
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 1

Query: 1   MEEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60
           MEEAL+ESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK
Sbjct: 1   MEEALIESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60

Query: 61  SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQTTPYHNINGGGIPKPPAGSSSVKVRE 120
           SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQTTPYHNINGGGIPKPPAGSSSVKVRE
Sbjct: 61  SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQTTPYHNINGGGIPKPPAGSSSVKVRE 120

Query: 121 KKRPLLED 129
           KKRPLLED
Sbjct: 121 KKRPLLED 128

BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|659088212|ref|XP_008444861.1| (PREDICTED: uncharacterized protein LOC103488082 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 7.9e-40
Identity = 94/129 (72.87%), Postives = 110/129 (85.27%), Query Frame = 1

Query: 1   MEEALVESALSKLMGKVDTSIGKLFLLSNIK-DESCRRLLHLSQSLSPPTLSALALAATV 60
           MEE LVESALS+L+G+ D+S   LFLL NIK DESCRRLLHLS+SLSPPTL ALA+A T+
Sbjct: 9   MEEGLVESALSQLIGETDSSAPILFLLRNIKKDESCRRLLHLSRSLSPPTLRALAMADTI 68

Query: 61  KSLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQTTPYHNINGGGIPKPPAGSSSVKVR 120
           K+LEK+NQQL++LL TT+GEVKLLS+QIGYL+E + T   +INGGGI KPPA SSSVKV 
Sbjct: 69  KTLEKENQQLQKLLCTTQGEVKLLSDQIGYLMEGKKTSCDDINGGGIRKPPAASSSVKVN 128

Query: 121 EKKRPLLED 129
           EKKRPL ED
Sbjct: 129 EKKRPLSED 137

BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|590597715|ref|XP_007018691.1| (Uncharacterized protein TCM_034839 [Theobroma cacao])

HSP 1 Score: 65.5 bits (158), Expect = 8.0e-08
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 1

Query: 1   MEEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60
           +EE L+ES L+ L+ K +   G+ FL +N   ESC++L+ +   L P T   L+LAA +K
Sbjct: 165 VEENLLESMLATLICKDEVMSGRAFLEANNSLESCQKLITMWHRLRPSTKKVLSLAAELK 224

Query: 61  SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQ---TTPYH---NINGGGIPKPPAGSS 120
           +LEKD + L+  L+  + EVK+L  +   L EE       YH   N++G G     +GS+
Sbjct: 225 ALEKDKEHLRINLNKAEEEVKVLFEENNILDEENKRLLMQYHKEKNLHGSG--GKHSGSA 284

Query: 121 SVKVREKK 123
           S K  ++K
Sbjct: 285 SAKTNKRK 290

BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|703115895|ref|XP_010101007.1| (28 kDa ribonucleoprotein [Morus notabilis])

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-07
Identity = 47/135 (34.81%), Postives = 66/135 (48.89%), Query Frame = 1

Query: 2   EEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVKS 61
           +++L+ES L+ L+   D   G  FL +N   ESC RLL +   L P T   L+LAA  K+
Sbjct: 166 QDSLLESVLATLISGDDAVPGHAFLEANSSHESCLRLLEMWNFLKPSTQKVLSLAAEFKA 225

Query: 62  LEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEE---------QTTPYHNINGGGIPKPPAG 121
           LEKD + L+  L+  + EVKLL  +   L EE         +    H  +G      PA 
Sbjct: 226 LEKDKEHLRTNLYRAEEEVKLLFEENNMLDEENKKLLMKFNKERNQHGSSGKHASSAPAK 285

Query: 122 SSSVKVREKKRPLLE 128
           S+  K   K   L+E
Sbjct: 286 SNKRKSSSKTSSLIE 300

BLAST of CSPI02G21240 vs. NCBI nr
Match: gi|728846035|gb|KHG25478.1| (Protein hook [Gossypium arboreum])

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-07
Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = 1

Query: 1   MEEALVESALSKLMGKVDTSIGKLFLLSNIKDESCRRLLHLSQSLSPPTLSALALAATVK 60
           +EE L+ES LS L+ K +   G+ FL +N   E+C+++L +   L P T   L+LAA VK
Sbjct: 165 LEENLLESVLSTLISKDEVMCGRAFLEANNSLEACQKMLKMWNRLRPSTRKILSLAAEVK 224

Query: 61  SLEKDNQQLKRLLHTTKGEVKLLSNQIGYLIEEQ---TTPYH-NINGGGIPKPPAGSSSV 120
           +LEKD + L+  L   + EVK+L  +   L E        YH   N  G     +GS+S 
Sbjct: 225 TLEKDKEHLRMNLCKAEDEVKVLFEENNILDEANKRLLRQYHKEKNLHGSDGKHSGSAST 284

Query: 121 KVREKK 123
           K  ++K
Sbjct: 285 KTNKRK 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LNW1_CUCSA5.1e-6299.22Uncharacterized protein OS=Cucumis sativus GN=Csa_2G369160 PE=4 SV=1[more]
A0A061FFR9_THECC5.5e-0836.72Uncharacterized protein OS=Theobroma cacao GN=TCM_034839 PE=4 SV=1[more]
W9REI7_9ROSA1.2e-0734.8128 kDa ribonucleoprotein OS=Morus notabilis GN=L484_013185 PE=4 SV=1[more]
A0A0B0PG99_GOSAR1.6e-0736.51Protein hook OS=Gossypium arboreum GN=F383_01412 PE=4 SV=1[more]
K7M7Q6_SOYBN1.6e-0735.94Uncharacterized protein OS=Glycine max GN=GLYMA_14G177700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G09060.23.8e-0838.10 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700207595|gb|KGN62714.1|7.3e-6299.22hypothetical protein Csa_2G369160 [Cucumis sativus][more]
gi|659088212|ref|XP_008444861.1|7.9e-4072.87PREDICTED: uncharacterized protein LOC103488082 [Cucumis melo][more]
gi|590597715|ref|XP_007018691.1|8.0e-0836.72Uncharacterized protein TCM_034839 [Theobroma cacao][more]
gi|703115895|ref|XP_010101007.1|1.8e-0734.8128 kDa ribonucleoprotein [Morus notabilis][more]
gi|728846035|gb|KHG25478.1|2.3e-0736.51Protein hook [Gossypium arboreum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G21240.1CSPI02G21240.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 52..86
scor

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G21240Wax gourdcpiwgoB191
CSPI02G21240Wax gourdcpiwgoB200
CSPI02G21240Wild cucumber (PI 183967)cpicpiB059
CSPI02G21240Wild cucumber (PI 183967)cpicpiB085
CSPI02G21240Cucumber (Gy14) v1cgycpiB116
CSPI02G21240Cucumber (Gy14) v1cgycpiB239
CSPI02G21240Cucumber (Gy14) v1cgycpiB467
CSPI02G21240Cucurbita maxima (Rimu)cmacpiB660
CSPI02G21240Cucurbita maxima (Rimu)cmacpiB794
CSPI02G21240Cucurbita moschata (Rifu)cmocpiB001
CSPI02G21240Cucurbita moschata (Rifu)cmocpiB651
CSPI02G21240Cucurbita moschata (Rifu)cmocpiB783
CSPI02G21240Cucumber (Chinese Long) v2cpicuB071
CSPI02G21240Cucumber (Chinese Long) v2cpicuB091
CSPI02G21240Melon (DHL92) v3.5.1cpimeB118
CSPI02G21240Melon (DHL92) v3.5.1cpimeB130
CSPI02G21240Melon (DHL92) v3.5.1cpimeB157
CSPI02G21240Watermelon (Charleston Gray)cpiwcgB104
CSPI02G21240Watermelon (Charleston Gray)cpiwcgB122
CSPI02G21240Watermelon (97103) v1cpiwmB140
CSPI02G21240Watermelon (97103) v1cpiwmB162
CSPI02G21240Cucurbita pepo (Zucchini)cpecpiB056
CSPI02G21240Cucurbita pepo (Zucchini)cpecpiB093
CSPI02G21240Cucurbita pepo (Zucchini)cpecpiB772
CSPI02G21240Bottle gourd (USVL1VR-Ls)cpilsiB102
CSPI02G21240Bottle gourd (USVL1VR-Ls)cpilsiB117
CSPI02G21240Melon (DHL92) v3.6.1cpimedB125
CSPI02G21240Melon (DHL92) v3.6.1cpimedB147
CSPI02G21240Cucumber (Gy14) v2cgybcpiB057
CSPI02G21240Cucumber (Gy14) v2cgybcpiB102
CSPI02G21240Cucumber (Gy14) v2cgybcpiB258
CSPI02G21240Silver-seed gourdcarcpiB0063
CSPI02G21240Silver-seed gourdcarcpiB0437
CSPI02G21240Silver-seed gourdcarcpiB0662
CSPI02G21240Cucumber (Chinese Long) v3cpicucB090
CSPI02G21240Cucumber (Chinese Long) v3cpicucB112
CSPI02G21240Watermelon (97103) v2cpiwmbB101
CSPI02G21240Watermelon (97103) v2cpiwmbB108