Carg20526 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20526
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	centlein-like
Location	Cucurbita_argyrosperma_scaffold_113 : 91038 .. 92808 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCATACATCAAAGAATCAATCGACCACACACTGGGCCTCCCCGTCTCCACCCAAACGCTGGCTCTGAAACTCGCCGCCTCCGAAGCCACCCAGCGCCGCCTCGAAGCCCAATGCCTCTCTTTACAGTCTAAATTAAACCAACACATCCGCTCAACCAAAGCCGCGCAGGTTCGACCCTAAATTACTTCATAAATTTCATGATTTTTTTTTTTTTTTTTTTCATAATCTATGGGTTTTGGTTGGTTCAGGCGGAAGCGATGATGAGCGCGCAAGGCTTGAAGAAGGCGATCGAGAGAAACGAACGATTAAGCAAAGAGAATTCGCGTTTGGAGGATCAATTAAAGAGAATGAAAGTCATTGCAAGTAGAGGGAAAATGGCTATCCATGGCGCCAAGGAGGCGGAAGATCGTGCGCGTAAATTGAACGATGAGGCTACGAAATTAACCGAGGATTTGAATTTCTTTAAAGAACAATACCAAATGCGAAAGGTGAGGTTAATTTGGATCGTTCTTTAATATTTTGTTAGGAATTACGACCATCCACAATAGTATGATAATATGATATTGTCTACTTTGAGTATAAGCAAAAGAATCAATTAGCCAACGTGGGACCCTCCCAACAATCCTCCCCTTAAACAAAGTACACCTCGAGGCCTATGGAACCCCTCAAACGTGAGACCCTCCCAACAATCCTCAACAATCTTCCCCTTAAACAAAGTACACCATAGAGCCTTTCTCGAGGCCTATGGAACCCCTCGAACGTGGGACCCTCCCAACAATCTTCAACAATCTTCCCCTTAAACAAAGTATACCATAGAGCCTCCCTCGAGGCCTATGGAACCCCTCGAACATGGGACCCTCCTAATGATCCTCAACAATCTTCCCCTTAAGCAAAGTACACCATAGAGCCTCCCTCGAGCCTATAGAACCCCTCGAACAGCCTCCCCTTAATTGAGGCCCCAAATAGCAAAAGAATTAATTAGCTAACAGGGACCTTCCCAACAATCCTCCCCTCGAACAAAGTACACCATAAAACTTCCCTTGAGGCCTATTGAGTCCCTCGAACCGCCTCCCCTTAATTGAGGCTCAACTCCTTTCTGAGTTTGATTCGATTTCGTTGCAGTTTTCCTTCGCTTCCATGGAGGAGGTTCTAGTCGAGACGGCTTTAAATGATTTGGTTCCTGGGGATACTGGTTCGACCGTTGGGCAGTTCTTGGTGGCGAATATGAACAACGACTCGTGTCGAAGATTGCTACATTTGTCGCAGAGCTTAAGGCCTTCAACTCAAAGAGCTCTGTCTCTAGCTGCTCAAATCAAGACCCTCGAGGAAAACAATCGACAGCTTCAGATTCGCCTCTCAGTAGCTCAAGGGGAGGTGAGATTTCATGAAAGATTCAAACTTTTGACCTCTCGATCGAAACCCATTTCATAAAACGGTTCGTAATTTTCTGGTATTGTTGTTATTAAGGTGATACTATTGTCGGATGAGATTGGTCGGCTGTTGGAGGATAAAGAAGACAGCAGCCCAGACCCAGATTTTGCCAGGAAACCACCGGCTAGTAGTTCATCCGTGAAGGTTGAGAAAAATGAATGGAATGGCTGTAACTTGTTTAAGCAGTTTGTGATTGTTGTCTGTTTTTGTATGATTGTTTATTATTTTTTATTTACGTTGACTTCCTAGAACCATGAGTTGTGTCAACGGTATTTGACTTTTGCAGTTGCGTCAAAACAAAAGACCAAGGGAATCGTCGAAGTCGGAAGATTGA

mRNA sequence

ATGGACGCATACATCAAAGAATCAATCGACCACACACTGGGCCTCCCCGTCTCCACCCAAACGCTGGCTCTGAAACTCGCCGCCTCCGAAGCCACCCAGCGCCGCCTCGAAGCCCAATGCCTCTCTTTACAGTCTAAATTAAACCAACACATCCGCTCAACCAAAGCCGCGCAGGCGGAAGCGATGATGAGCGCGCAAGGCTTGAAGAAGGCGATCGAGAGAAACGAACGATTAAGCAAAGAGAATTCGCGTTTGGAGGATCAATTAAAGAGAATGAAAGTCATTGCAAGTAGAGGGAAAATGGCTATCCATGGCGCCAAGGAGGCGGAAGATCGTGCGCGTAAATTGAACGATGAGGCTACGAAATTAACCGAGGATTTGAATTTCTTTAAAGAACAATACCAAATGCGAAAGTTTTCCTTCGCTTCCATGGAGGAGGTTCTAGTCGAGACGGCTTTAAATGATTTGGTTCCTGGGGATACTGGTTCGACCGTTGGGCAGTTCTTGGTGGCGAATATGAACAACGACTCGTGTCGAAGATTGCTACATTTGTCGCAGAGCTTAAGGCCTTCAACTCAAAGAGCTCTGTCTCTAGCTGCTCAAATCAAGACCCTCGAGGAAAACAATCGACAGCTTCAGATTCGCCTCTCAGTAGCTCAAGGGGAGGTGATACTATTGTCGGATGAGATTGGTCGGCTGTTGGAGGATAAAGAAGACAGCAGCCCAGACCCAGATTTTGCCAGGAAACCACCGGCTAGTAGTTCATCCGTGAAGGTTGAGAAAAATGAATGGAATGGCTGTAACTTGTTTAAGCAGTTTGTGATTGTTTTGCGTCAAAACAAAAGACCAAGGGAATCGTCGAAGTCGGAAGATTGA

Coding sequence (CDS)

ATGGACGCATACATCAAAGAATCAATCGACCACACACTGGGCCTCCCCGTCTCCACCCAAACGCTGGCTCTGAAACTCGCCGCCTCCGAAGCCACCCAGCGCCGCCTCGAAGCCCAATGCCTCTCTTTACAGTCTAAATTAAACCAACACATCCGCTCAACCAAAGCCGCGCAGGCGGAAGCGATGATGAGCGCGCAAGGCTTGAAGAAGGCGATCGAGAGAAACGAACGATTAAGCAAAGAGAATTCGCGTTTGGAGGATCAATTAAAGAGAATGAAAGTCATTGCAAGTAGAGGGAAAATGGCTATCCATGGCGCCAAGGAGGCGGAAGATCGTGCGCGTAAATTGAACGATGAGGCTACGAAATTAACCGAGGATTTGAATTTCTTTAAAGAACAATACCAAATGCGAAAGTTTTCCTTCGCTTCCATGGAGGAGGTTCTAGTCGAGACGGCTTTAAATGATTTGGTTCCTGGGGATACTGGTTCGACCGTTGGGCAGTTCTTGGTGGCGAATATGAACAACGACTCGTGTCGAAGATTGCTACATTTGTCGCAGAGCTTAAGGCCTTCAACTCAAAGAGCTCTGTCTCTAGCTGCTCAAATCAAGACCCTCGAGGAAAACAATCGACAGCTTCAGATTCGCCTCTCAGTAGCTCAAGGGGAGGTGATACTATTGTCGGATGAGATTGGTCGGCTGTTGGAGGATAAAGAAGACAGCAGCCCAGACCCAGATTTTGCCAGGAAACCACCGGCTAGTAGTTCATCCGTGAAGGTTGAGAAAAATGAATGGAATGGCTGTAACTTGTTTAAGCAGTTTGTGATTGTTTTGCGTCAAAACAAAAGACCAAGGGAATCGTCGAAGTCGGAAGATTGA

Protein sequence

MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAEAMMSAQGLKKAIERNERLSKENSRLEDQLKRMKVIASRGKMAIHGAKEAEDRARKLNDEATKLTEDLNFFKEQYQMRKFSFASMEEVLVETALNDLVPGDTGSTVGQFLVANMNNDSCRRLLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSSPDPDFARKPPASSSSVKVEKNEWNGCNLFKQFVIVLRQNKRPRESSKSED

Homology

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BLAST of Carg20526 vs. NCBI nr
Match: XP_023538594.1 (uncharacterized protein LOC111799313 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 6.3e-65
Identity = 154/230 (66.96%), Postives = 156/230 (67.83%), Query Frame = 0


Query: 62  MMSAQGLKKAIERNERLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
           MMSAQGLKKAIERNERLS                                          
Sbjct: 1   MMSAQGLKKAIERNERLSKENSRLEDQLKKMKVIASKGQMAIHVAKQAEDRARKLNNEAT 60

Query: 122 XXXXXXXXXXXQYQMRKFSFASMEEVLVETALNDLVPGDTGSTVGQFLVANMNNDSCRRL 181
                      Q+QMRKFSFASMEEVLVETALNDLVPGDTG TVGQFLVANMNN+SCRRL
Sbjct: 61  KLTEDLNFFKEQHQMRKFSFASMEEVLVETALNDLVPGDTGLTVGQFLVANMNNESCRRL 120

Query: 182 LHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSS 241
           LHLSQSLRPST RALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDS 
Sbjct: 121 LHLSQSLRPSTHRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSR 180

Query: 242 PDPDFARKPPASSSSVKVEKNEWNGCNLFKQFVIVLRQNKRPRESSKSED 292
           PDPDFARKPPASSSSVK                  LRQNKRPRESSKSED
Sbjct: 181 PDPDFARKPPASSSSVK------------------LRQNKRPRESSKSED 212

[Close]

BLAST of Carg20526 vs. NCBI nr
Match: XP_022951817.1 (uncharacterized protein LOC111454550 [Cucurbita moschata])

HSP 1 Score: 250.4 bits (638), Expect = 7.6e-63
Identity = 153/230 (66.52%), Postives = 154/230 (66.96%), Query Frame = 0


Query: 62  MMSAQGLKKAIERNERLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
           MMSAQGLKKAIERNERLS                                          
Sbjct: 1   MMSAQGLKKAIERNERLSKENSRLEDQLKKMKVIASRGKMAIHGVKEAEDRARKLNNEAM 60

Query: 122 XXXXXXXXXXXQYQMRKFSFASMEEVLVETALNDLVPGDTGSTVGQFLVANMNNDSCRRL 181
                      Q+QMRKFSFASMEEVLVETALNDLV  DTGSTVGQFLVANMNNDSCRRL
Sbjct: 61  KLTEDLNFFKEQHQMRKFSFASMEEVLVETALNDLVLRDTGSTVGQFLVANMNNDSCRRL 120

Query: 182 LHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSS 241
           LHLSQSLRPSTQRAL LAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSS
Sbjct: 121 LHLSQSLRPSTQRALFLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSS 180

Query: 242 PDPDFARKPPASSSSVKVEKNEWNGCNLFKQFVIVLRQNKRPRESSKSED 292
           PDPDFARKPPASSSSVK                  LRQNKRP ES KSED
Sbjct: 181 PDPDFARKPPASSSSVK------------------LRQNKRPWESLKSED 212

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BLAST of Carg20526 vs. NCBI nr
Match: XP_023002877.1 (uncharacterized protein LOC111496613 [Cucurbita maxima])

HSP 1 Score: 218.4 bits (555), Expect = 3.2e-53
Identity = 122/148 (82.43%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 144 MEEVLVETALNDLVPGDTGSTVGQFLVANMNNDSCRRLLHLSQSLRPSTQRALSLAAQIK 203
           MEEVLVETALNDLV GDTGST+GQFLVANMNN+SCRRLLHLSQSLRPS+ RALSLAAQIK
Sbjct: 1   MEEVLVETALNDLVLGDTGSTIGQFLVANMNNESCRRLLHLSQSLRPSSHRALSLAAQIK 60

Query: 204 TLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSSPDPDFARKPPASSSSVKVEKNE 263
           TLEENNRQLQI LSVAQGEV+LLSDEIGRLLEDKEDSSPDPDFARKPPASSSSVK     
Sbjct: 61  TLEENNRQLQIHLSVAQGEVMLLSDEIGRLLEDKEDSSPDPDFARKPPASSSSVK----- 120

Query: 264 WNGCNLFKQFVIVLRQNKRPRESSKSED 292
                        LRQNKRP ESSKSED
Sbjct: 121 -------------LRQNKRPWESSKSED 130

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BLAST of Carg20526 vs. NCBI nr
Match: XP_022131622.1 (uncharacterized protein LOC111004753 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 1.0e-38
Identity = 117/269 (43.49%), Postives = 151/269 (56.13%), Query Frame = 0


Query: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60
           +D YIKESI H+LGLPVS  TL LKL ASEA Q+ L  QCLSLQSKLN  I + ++++AE
Sbjct: 8   IDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQSSKAE 67

Query: 61  AMMSAQGLKKAIERNERLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           A +SAQ LKKAIE+N  LS                                         
Sbjct: 68  AKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVRELEQEM 127

Query: 121 XXXXXXXXXXXXQYQMRKFSFASMEEVLVETALNDLVPGDTGSTVGQFLVANMNNDSCRR 180
                       QYQ RKF  +SMEE LV++ L   + G+T +   +FL+ N    SCRR
Sbjct: 128 NELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFI-GETEAPAAEFLLHNAGYSSCRR 187

Query: 181 LLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDS 240
           LL+LS SL P+TQ+ALSLAA+IK LE+N  +LQ+ L  AQ EV  L+++I  L+ED+  +
Sbjct: 188 LLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLMEDQTST 247

Query: 241 SPDPDFAR----KPPASS--SSVKVEKNE 264
           S +    R    KPPASS  +SVK+   E
Sbjct: 248 SHEEGSQRRCGGKPPASSDYASVKLHGGE 275

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BLAST of Carg20526 vs. NCBI nr
Match: XP_018846165.1 (PREDICTED: intracellular protein transport protein USO1-like [Juglans regia])

HSP 1 Score: 117.5 bits (293), Expect = 7.7e-23
Identity = 108/244 (44.26%), Postives = 146/244 (59.84%), Query Frame = 0


Query: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60
           +D YIKESIDH+LGLPVS +TL LKL+A E TQRRL  +CLSLQ+KL +     +  +AE
Sbjct: 7   LDDYIKESIDHSLGLPVSKRTLLLKLSAFEDTQRRLRNRCLSLQNKLQEKEDVIERIRAE 66

Query: 61  AMMSAQGLKKAIERNERLS-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           + M+AQ LKK +E N++L+                                     XXXX
Sbjct: 67  SSMNAQALKKFVEENQKLAVECGNLLSQCKKWERECSLYDQDREALMDFGNEADERXXXX 126

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXQYQMRKFSFASMEEV----LVETALNDLVPGDTGSTV 180
           XXXXXXXXXXXXXXXXXXX    +Y MR    +S E +    L+E+ L  L+  D  +  
Sbjct: 127 XXXXXXXXXXXXXXXXXXXFYKHEYDMRAVDSSSEETIIENNLLESVLTTLISKDDVAPA 186

Query: 181 GQFLVANMNNDSCRRLLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVIL 230
             FL AN  ++SC+ LL +   LRPSTQ+ALSLAA++ TLE++  +L++ L+ A+ EV +
Sbjct: 187 HAFLEANSRHESCQILLKMWNCLRPSTQKALSLAAEVNTLEKDKERLKVNLNRAEEEVKM 246

[Close]

BLAST of Carg20526 vs. TAIR10
Match: AT1G14680.1 (unknown protein)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16
Identity = 88/232 (37.93%), Postives = 124/232 (53.45%), Query Frame = 0


Query: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60
           +D +IKE+IDH+LGLP+S   L  KL  +E +QRRL  Q LSL S+L +  +     ++E
Sbjct: 7   VDDFIKETIDHSLGLPISMDVLQKKLYTAEESQRRLREQYLSLVSRLKEKEKVIDLVRSE 66

Query: 61  AMMSAQGLKKAIERNERL-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           A M+AQ LKK +E N++L S                                  XXXXXX
Sbjct: 67  ASMNAQSLKKFVEENQKLGSEREDLVNQCKKWEKECFLYHQDRESLMEFGNETDXXXXXX 126

Query: 121 XXXXXXXXXXXXXQYQMRKFSFASMEEVLVETALNDLVPGDTGSTVGQ-FLVANMNNDS- 180
           XXXXXXXXXXXXX          S E+ LV++ L   V  D   ++G+ FL AN   D  
Sbjct: 127 XXXXXXXXXXXXXXXXXXXXXIESEEDCLVDSILASFVSKDESISLGRIFLEANSEEDKC 186

Query: 181 CRRLLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDE 230
           C  LL     L+P+TQ+ +SL + +K +E+    L + L+ A+ EV L+S++
Sbjct: 187 CETLLRKWDQLKPTTQKFVSLVSMVKRIEKEKECLIMNLAKAEQEVELVSEQ 238

[Close]

BLAST of Carg20526 vs. TAIR10
Match: AT4G09060.2 (unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-10
Identity = 94/278 (33.81%), Postives = 135/278 (48.56%), Query Frame = 0


Query: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60
           ++ YIK++IDH+LGLP+S ++L  KL  +E +QRRL  Q   L S+L +        ++E
Sbjct: 23  VEEYIKDTIDHSLGLPISMESLQKKLYTAEESQRRLREQYQGLISRLKEKDHVIDRVRSE 82

Query: 61  AMMSAQGLKKAIERNE---------------------------------------RLSXX 120
           A M+AQ LKK +E N+                                          XX
Sbjct: 83  ASMNAQALKKFVEENQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 142

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQMRKFSF 180
           XXXXXXXXXXXXXXXXXXXXXXXX                            + + +   
Sbjct: 143 XXXXXXXXXXXXXXXXXXXXXXXXIGDGEKLERSVRVNISKKMYLLAATYNHFNIVENCT 202

Query: 181 ASMEEVLVETALNDLVPGDTGSTVGQFLVANMNNDSCRRLLHLSQSLRPSTQRALSLAAQ 240
             +EE L+++ L  L+  D       FL AN+++ SC+ LL     L+PSTQ+ LSL ++
Sbjct: 203 TPLEEDLLDSVLGSLISKDETIMGRLFLEANIHDQSCQALLSKWDHLKPSTQKVLSLVSK 262

[Close]

BLAST of Carg20526 vs. TrEMBL
Match: tr|A0A2I4GQJ3|A0A2I4GQJ3_9ROSI (intracellular protein transport protein USO1-like OS=Juglans regia OX=51240 GN=LOC109009952 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.1e-23
Identity = 108/244 (44.26%), Postives = 146/244 (59.84%), Query Frame = 0


Query: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60
           +D YIKESIDH+LGLPVS +TL LKL+A E TQRRL  +CLSLQ+KL +     +  +AE
Sbjct: 7   LDDYIKESIDHSLGLPVSKRTLLLKLSAFEDTQRRLRNRCLSLQNKLQEKEDVIERIRAE 66

Query: 61  AMMSAQGLKKAIERNERLS-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           + M+AQ LKK +E N++L+                                     XXXX
Sbjct: 67  SSMNAQALKKFVEENQKLAVECGNLLSQCKKWERECSLYDQDREALMDFGNEADERXXXX 126

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXQYQMRKFSFASMEEV----LVETALNDLVPGDTGSTV 180
           XXXXXXXXXXXXXXXXXXX    +Y MR    +S E +    L+E+ L  L+  D  +  
Sbjct: 127 XXXXXXXXXXXXXXXXXXXFYKHEYDMRAVDSSSEETIIENNLLESVLTTLISKDDVAPA 186

Query: 181 GQFLVANMNNDSCRRLLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVIL 230
             FL AN  ++SC+ LL +   LRPSTQ+ALSLAA++ TLE++  +L++ L+ A+ EV +
Sbjct: 187 HAFLEANSRHESCQILLKMWNCLRPSTQKALSLAAEVNTLEKDKERLKVNLNRAEEEVKM 246

[Close]

BLAST of Carg20526 vs. TrEMBL
Match: tr|A0A2N9IYL3|A0A2N9IYL3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58309 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 110/241 (45.64%), Postives = 148/241 (61.41%), Query Frame = 0


Query: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60
           +D YIK+SIDH+LGLPVSTQTL LKL+ S+  QRRL ++CLSLQ KL +        +AE
Sbjct: 7   IDDYIKDSIDHSLGLPVSTQTLELKLSVSQEAQRRLRSRCLSLQHKLQEKEDLIDRIRAE 66

Query: 61  AMMSAQGLKKAIERNERL-----------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           + M+AQ LKK +E N++L           +                         XXXXX
Sbjct: 67  SSMNAQALKKFVEENQKLALECANLLSQCNKWERECSLYDHDREALMDFGNEADEXXXXX 126

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXQYQMRKFSFAS----MEEVLVETALNDLVPGDTGSTV 180
           XXXXXXXXXXXXXXXXXXXXX  + +MR    ++    +E  L+E+ L  L+  D  ++ 
Sbjct: 127 XXXXXXXXXXXXXXXXXXXXXKCECEMRAVESSAEDTIIENSLLESVLTTLISKDDLASA 186

Query: 181 GQFLVANMNNDSCRRLLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVIL 227
             FL AN +++SC+RLL +   LRPSTQ+ LSLAA++KTLE++   L+I L+ A+ EV L
Sbjct: 187 HAFLEANSSHESCQRLLKMWNQLRPSTQKVLSLAAEVKTLEKDKDHLRINLNRAEEEVKL 246

[Close]

BLAST of Carg20526 vs. TrEMBL
Match: tr|A0A1S3BBC9|A0A1S3BBC9_CUCME (uncharacterized protein LOC103488082 OS=Cucumis melo OX=3656 GN=LOC103488082 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.8e-21
Identity = 70/131 (53.44%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 136 MRKFSFASMEEVLVETALNDLVPGDTGSTVGQFLVANMNND-SCRRLLHLSQSLRPSTQR 195
           M++F  +SMEE LVE+AL+ L+     S    FL+ N+  D SCRRLLHLS+SL P T R
Sbjct: 1   MQRFQSSSMEEGLVESALSQLIGETDSSAPILFLLRNIKKDESCRRLLHLSRSLSPPTLR 60

Query: 196 ALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSSPDPDFA--RKPPA 255
           AL++A  IKTLE+ N+QLQ  L   QGEV LLSD+IG L+E K+ S  D +    RKPPA
Sbjct: 61  ALAMADTIKTLEKENQQLQKLLCTTQGEVKLLSDQIGYLMEGKKTSCDDINGGGIRKPPA 120

Query: 256 SSSSVKVEKNE 264
           +SSSVKV + +
Sbjct: 121 ASSSVKVNEKK 131

[Close]

BLAST of Carg20526 vs. TrEMBL
Match: tr|A0A1Q3CT80|A0A1Q3CT80_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26696 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20
Identity = 128/254 (50.39%), Postives = 165/254 (64.96%), Query Frame = 0


Query: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60
           +D YIKESID +LGLP+STQTL LKL A+E T RRL  Q   L SKL Q  ++   A+AE
Sbjct: 7   IDDYIKESIDESLGLPISTQTLQLKLRAAEETHRRLRDQYFLLHSKLKQKDQTLDRARAE 66

Query: 61  AMMSAQGLKKAIERNERLS-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           A M+A  ++K +E N++L+           XXXXXXXXXXXXXX      XXXXXXXXXX
Sbjct: 67  ANMNAVAVRKFVEENQKLAAECANXXXXXXXXXXXXXXXXXXXXALMDFGXXXXXXXXXX 126

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXQYQMR-----KFSFASMEEVLVETALNDLVPGDTGST 180
           XXXXXXXXXXXXXXXXXX      Y+ R          + EE L+E+ L  L+  +  ++
Sbjct: 127 XXXXXXXXXXXXXXXXXXRFYKHHYETRGRGEHPTEVTTTEENLLESILATLIGKEEIAS 186

Query: 181 VGQFLVANMNNDSCRRLLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVI 239
              FL AN  N+SC++LL +  SLRPSTQ+ALSLAA++KTLE++   L++ L  A+ EV 
Sbjct: 187 GHAFLEANSGNESCQKLLKMWNSLRPSTQKALSLAAEVKTLEKDKEHLRMNLRRAEDEVK 246

[Close]

BLAST of Carg20526 vs. TrEMBL
Match: tr|A0A2P6PHG7|A0A2P6PHG7_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0238321 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.5e-19
Identity = 126/228 (55.26%), Postives = 159/228 (69.74%), Query Frame = 0


Query: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60
           +D YI+ESIDHTLGLPVSTQTL LKL  SEA +RRL  Q   L +KL +  ++ + ++AE
Sbjct: 8   VDDYIRESIDHTLGLPVSTQTLELKLRCSEAARRRLRDQYTVLLAKLKEKDQALERSRAE 67

Query: 61  AMMSAQGLKKAIERNERLS-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           A M+AQ L+K +E N+RL+           XXXXXXXXXXXXXXX      XXXXXXXXX
Sbjct: 68  ACMNAQALRKFVEENQRLAAXXXXXXXXXXXXXXXXXXXXXXXXXLMDFGNXXXXXXXXX 127

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXQYQMRKFSFAS----MEEVLVETALNDLVPGDTGSTV 180
           XXXXXXXXXXXXXXXXXXXXXXX Y+      ++    +EE LVE+ L  L   +TG+  
Sbjct: 128 XXXXXXXXXXXXXXXXXXXXXXXXYERLSVDSSADGSPVEEKLVESVLAILTKDETGAAC 187

Query: 181 GQFLVANMNNDSCRRLLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQ 214
             FL AN  N+SC+RLL++   LRPS+Q+ LSL A++KTL++NN  L+
Sbjct: 188 A-FLEANSGNESCQRLLNMWNGLRPSSQKVLSLVAELKTLQKNNETLE 234

The following BLAST results are available for this feature:

BLAST of Carg20526 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538594.1	6.3e-65	66.96	uncharacterized protein LOC111799313 [Cucurbita pepo subsp. pepo]	[more]
XP_022951817.1	7.6e-63	66.52	uncharacterized protein LOC111454550 [Cucurbita moschata]	[more]
XP_023002877.1	3.2e-53	82.43	uncharacterized protein LOC111496613 [Cucurbita maxima]	[more]
XP_022131622.1	1.0e-38	43.49	uncharacterized protein LOC111004753 [Momordica charantia]	[more]
XP_018846165.1	7.7e-23	44.26	PREDICTED: intracellular protein transport protein USO1-like [Juglans regia]	[more]

BLAST of Carg20526 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14680.1	2.9e-16	37.93	unknown protein	[more]
AT4G09060.2	2.4e-10	33.81	unknown protein	[more]

BLAST of Carg20526 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20526 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4GQJ3\|A0A2I4GQJ3_9ROSI	5.1e-23	44.26	intracellular protein transport protein USO1-like OS=Juglans regia OX=51240 GN=L...	[more]
tr\|A0A2N9IYL3\|A0A2N9IYL3_FAGSY	1.1e-22	45.64	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58309 PE=4 SV=1	[more]
tr\|A0A1S3BBC9\|A0A1S3BBC9_CUCME	2.8e-21	53.44	uncharacterized protein LOC103488082 OS=Cucumis melo OX=3656 GN=LOC103488082 PE=...	[more]
tr\|A0A1Q3CT80\|A0A1Q3CT80_CEPFO	1.4e-20	50.39	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26696 PE=4...	[more]
tr\|A0A2P6PHG7\|A0A2P6PHG7_ROSCH	1.5e-19	55.26	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0238321 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20526-RA	Carg20526-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..133
None	No IPR available	COILS	Coil	Coil	coord: 195..222
None	No IPR available	COILS	Coil	Coil	coord: 68..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..260
None	No IPR available	PANTHER	PTHR35689	FAMILY NOT NAMED	coord: 1..233

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20526	Cla022116	Watermelon (97103) v1	carwmB0649
Carg20526	Csa2G369160	Cucumber (Chinese Long) v2	carcuB0670
Carg20526	ClCG08G011330	Watermelon (Charleston Gray)	carwcgB0633
Carg20526	CSPI02G21240	Wild cucumber (PI 183967)	carcpiB0680
Carg20526	Lsi08G009870	Bottle gourd (USVL1VR-Ls)	carlsiB593
Carg20526	Cp4.1LG07g01500	Cucurbita pepo (Zucchini)	carcpeB0925
Carg20526	MELO3C030322.2	Melon (DHL92) v3.6.1	carmedB0658
Carg20526	CsaV3_2G029910	Cucumber (Chinese Long) v3	carcucB0682
Carg20526	Cla97C11G220370	Watermelon (97103) v2	carwmbB0678
Carg20526	Cla97C08G154320	Watermelon (97103) v2	carwmbB0679
Carg20526	Bhi04G000651	Wax gourd	carwgoB0765
Carg20526	Bhi09G002094	Wax gourd	carwgoB0768

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20526	Cucurbita maxima (Rimu)	carcmaB0920
Carg20526	Cucurbita moschata (Rifu)	carcmoB0893