CSPI02G15250 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G15250
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 14835700 .. 14836778 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATGCTTCCATGCAAACGCATTCTTACACTCTTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACCCAGCTATAGGTATAGACTTTTCTATCTAATGGTATCTTTTCTTTTTCTCTTCATTTTTATGTTTTAGGTTACGGGTTAAACAAAAAAACATGTTATCTAATTGATTAGGACAATAATTCATATCGATTTTTTTTTATTTACTTCTTCTCCCTAGTTTTGTTGAGTTTAAAAATTAGGTCATACTATCAAATTTTGAGTTATAATCATAAACTGAAATATATTTTACCTTATGTAAGATGAGAATTTTTAATTTTCTCATGGTACAACATCTTGATCAATTGTACATGCATGTATAAGGTTCATAGTATATATAATTTAGTTTTTTGATGTATTTTGAAAGGTTTGTGCCAAACATAGATACATTCAAACATGACAACATATATGTTTCATGATGCTTATTTGGTAAGTTTAATGAGACTATGGAAGTATCTCTTACCAAACGAGAAATATACATATTATATACAAATGCATTTGTTTAAGAAATTAAAATATTTACTTATTTTTATAATCTACTTCTATAAATAGTATTTCAAAAAGAAGTTTTTCTAACCAGAAAAAGAAAACAAAAAGAACAAGAAATAAAAGTTGTTTCTAGACATATTTTAAATGTTGTTTTGAATGAAGAATTTCGAATGACTTCAAAGTATGTCTGTCAATTGAATAAGTTCAATTCTATACGAAAAGCATCAAATAAAAAACTCATTCTACAAAGTTTTCCTCGATCTCTCTTTGGAAACCGAAATTTTATGTACAAGTTGAAGTTTGGACTGAGATTGTTACTGATGGGATTTCCTTAATTATTGATTTGTTTGTGATTGCAGCAGCAAGAAGTGTGGGAGTTGCTGAGATGAAAAATGAGAGTCAAAATGAGAAAGTAATTAACATGAATGATGATGCTTATAAAGTTCATAATAATGATGAAGAACATTATTTCTCAAGCACGGATGATTTGGGTGCAATGGATTATACTCCAGCTTCCAAGAAGCCTCCAATTCACAACTAG

mRNA sequence

ATGGCTATGCTTCCATGCAAACGCATTCTTACACTCTTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACCCAGCTATAGCAGCAAGAAGTGTGGGAGTTGCTGAGATGAAAAATGAGAGTCAAAATGAGAAAGTAATTAACATGAATGATGATGCTTATAAAGTTCATAATAATGATGAAGAACATTATTTCTCAAGCACGGATGATTTGGGTGCAATGGATTATACTCCAGCTTCCAAGAAGCCTCCAATTCACAACTAG

Coding sequence (CDS)

ATGGCTATGCTTCCATGCAAACGCATTCTTACACTCTTCGTCCTCATCCTCGTCCTTCTTTGTTGTTTCTCAAACCCAGCTATAGCAGCAAGAAGTGTGGGAGTTGCTGAGATGAAAAATGAGAGTCAAAATGAGAAAGTAATTAACATGAATGATGATGCTTATAAAGTTCATAATAATGATGAAGAACATTATTTCTCAAGCACGGATGATTTGGGTGCAATGGATTATACTCCAGCTTCCAAGAAGCCTCCAATTCACAACTAG
Homology
[Close]
BLAST of CSPI02G15250 vs. TrEMBL
Match: A0A0A0LMV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G297260 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.0e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MAMLPCKRILTLFVLILVLLCCFSNPAIAARSVGVAEMKNESQNEKVINMNDDAYKVHNN 60
          MAMLPCKRILTLFVLILVLLCCFSNPAIAARSVGVAEMKNESQNEKVINMNDDAYKVHNN
Sbjct: 1  MAMLPCKRILTLFVLILVLLCCFSNPAIAARSVGVAEMKNESQNEKVINMNDDAYKVHNN 60

Query: 61 DEEHYFSSTDDLGAMDYTPASKKPPIHN 89
          DEEHYFSSTDDLGAMDYTPASKKPPIHN
Sbjct: 61 DEEHYFSSTDDLGAMDYTPASKKPPIHN 88

[Close]
BLAST of CSPI02G15250 vs. NCBI nr
Match: gi|700206983|gb|KGN62102.1| (hypothetical protein Csa_2G297260 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MAMLPCKRILTLFVLILVLLCCFSNPAIAARSVGVAEMKNESQNEKVINMNDDAYKVHNN 60
          MAMLPCKRILTLFVLILVLLCCFSNPAIAARSVGVAEMKNESQNEKVINMNDDAYKVHNN
Sbjct: 1  MAMLPCKRILTLFVLILVLLCCFSNPAIAARSVGVAEMKNESQNEKVINMNDDAYKVHNN 60

Query: 61 DEEHYFSSTDDLGAMDYTPASKKPPIHN 89
          DEEHYFSSTDDLGAMDYTPASKKPPIHN
Sbjct: 61 DEEHYFSSTDDLGAMDYTPASKKPPIHN 88

The following BLAST results are available for this feature:
BLAST of CSPI02G15250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G15250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMV6_CUCSA1.0e-40100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G297260 PE=4 SV=1[more]
BLAST of CSPI02G15250 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G15250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206983|gb|KGN62102.1|1.4e-40100.00hypothetical protein Csa_2G297260 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G15250.1CSPI02G15250.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G15250Csa2G297260Cucumber (Chinese Long) v2cpicuB065
CSPI02G15250MELO3C020970Melon (DHL92) v3.5.1cpimeB098
CSPI02G15250ClCG02G000910Watermelon (Charleston Gray)cpiwcgB130
CSPI02G15250Lsi10G006770Bottle gourd (USVL1VR-Ls)cpilsiB091
CSPI02G15250MELO3C020970.2Melon (DHL92) v3.6.1cpimedB090
CSPI02G15250CsaV3_2G017800Cucumber (Chinese Long) v3cpicucB080
CSPI02G15250Cla97C02G027290Watermelon (97103) v2cpiwmbB122
CSPI02G15250Bhi10G001888Wax gourdcpiwgoB172
CSPI02G15250CmaCh20G011040Cucurbita maxima (Rimu)cmacpiB548
CSPI02G15250CmoCh20G011340Cucurbita moschata (Rifu)cmocpiB537
CSPI02G15250Cp4.1LG05g10970Cucurbita pepo (Zucchini)cpecpiB709
CSPI02G15250CsGy2G015240Cucumber (Gy14) v2cgybcpiB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G15250Silver-seed gourdcarcpiB0268
CSPI02G15250Silver-seed gourdcarcpiB0495
CSPI02G15250Silver-seed gourdcarcpiB1095
CSPI02G15250Cucumber (Chinese Long) v3cpicucB113
CSPI02G15250Watermelon (97103) v2cpiwmbB102
CSPI02G15250Wax gourdcpiwgoB190
CSPI02G15250Wild cucumber (PI 183967)cpicpiB086
CSPI02G15250Cucumber (Gy14) v1cgycpiB117
CSPI02G15250Cucumber (Gy14) v1cgycpiB374
CSPI02G15250Cucurbita maxima (Rimu)cmacpiB596
CSPI02G15250Cucurbita maxima (Rimu)cmacpiB659
CSPI02G15250Cucurbita moschata (Rifu)cmocpiB585
CSPI02G15250Cucurbita moschata (Rifu)cmocpiB653
CSPI02G15250Cucumber (Chinese Long) v2cpicuB092
CSPI02G15250Watermelon (Charleston Gray)cpiwcgB123
CSPI02G15250Watermelon (97103) v1cpiwmB136
CSPI02G15250Watermelon (97103) v1cpiwmB143
CSPI02G15250Cucurbita pepo (Zucchini)cpecpiB057
CSPI02G15250Cucurbita pepo (Zucchini)cpecpiB270
CSPI02G15250Bottle gourd (USVL1VR-Ls)cpilsiB105
CSPI02G15250Cucumber (Gy14) v2cgybcpiB259