CSPI02G10380 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G10380
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 10456361 .. 10456570 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCTTATTCCAATTGCAAGGAACACCATGGCTGA

mRNA sequence

ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCTTATTCCAATTGCAAGGAACACCATGGCTGA

Coding sequence (CDS)

ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCTTATTCCAATTGCAAGGAACACCATGGCTGA
Homology
[Close]
BLAST of CSPI02G10380 vs. TrEMBL
Match: A0A0A0LII8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G176170 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.7e-32
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60
          MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP
Sbjct: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60

Query: 61 YSNCKEHHG 70
          +SNCKEHHG
Sbjct: 61 HSNCKEHHG 69

[Close]
BLAST of CSPI02G10380 vs. NCBI nr
Match: gi|700206484|gb|KGN61603.1| (hypothetical protein Csa_2G176170 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-31
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60
          MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP
Sbjct: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60

Query: 61 YSNCKEHHG 70
          +SNCKEHHG
Sbjct: 61 HSNCKEHHG 69

The following BLAST results are available for this feature:
BLAST of CSPI02G10380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G10380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LII8_CUCSA8.7e-3298.55Uncharacterized protein OS=Cucumis sativus GN=Csa_2G176170 PE=4 SV=1[more]
BLAST of CSPI02G10380 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G10380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206484|gb|KGN61603.1|1.2e-3198.55hypothetical protein Csa_2G176170 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G10380.1CSPI02G10380.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G10380Csa2G176170Cucumber (Chinese Long) v2cpicuB065
CSPI02G10380MELO3C022992Melon (DHL92) v3.5.1cpimeB141
CSPI02G10380CsaV3_2G012800Cucumber (Chinese Long) v3cpicucB080
CSPI02G10380Cla97C06G116590Watermelon (97103) v2cpiwmbB149
CSPI02G10380CsGy2G010430Cucumber (Gy14) v2cgybcpiB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G10380Cucurbita pepo (Zucchini)cpecpiB126
CSPI02G10380Cucurbita pepo (Zucchini)cpecpiB241
CSPI02G10380Cucurbita pepo (Zucchini)cpecpiB306
CSPI02G10380Cucurbita pepo (Zucchini)cpecpiB598
CSPI02G10380Cucurbita pepo (Zucchini)cpecpiB716
CSPI02G10380Cucurbita pepo (Zucchini)cpecpiB851
CSPI02G10380Bottle gourd (USVL1VR-Ls)cpilsiB085
CSPI02G10380Bottle gourd (USVL1VR-Ls)cpilsiB125
CSPI02G10380Bottle gourd (USVL1VR-Ls)cpilsiB127
CSPI02G10380Melon (DHL92) v3.6.1cpimedB134
CSPI02G10380Melon (DHL92) v3.6.1cpimedB137
CSPI02G10380Cucumber (Gy14) v2cgybcpiB100
CSPI02G10380Silver-seed gourdcarcpiB0259
CSPI02G10380Silver-seed gourdcarcpiB0265
CSPI02G10380Silver-seed gourdcarcpiB0783
CSPI02G10380Silver-seed gourdcarcpiB0812
CSPI02G10380Silver-seed gourdcarcpiB0995
CSPI02G10380Silver-seed gourdcarcpiB1112
CSPI02G10380Cucumber (Chinese Long) v3cpicucB088
CSPI02G10380Watermelon (97103) v2cpiwmbB133
CSPI02G10380Watermelon (97103) v2cpiwmbB157
CSPI02G10380Wax gourdcpiwgoB122
CSPI02G10380Wax gourdcpiwgoB142
CSPI02G10380Wax gourdcpiwgoB147
CSPI02G10380Wild cucumber (PI 183967)cpicpiB057
CSPI02G10380Wild cucumber (PI 183967)cpicpiB064
CSPI02G10380Cucumber (Gy14) v1cgycpiB378
CSPI02G10380Cucumber (Gy14) v1cgycpiB565
CSPI02G10380Cucurbita maxima (Rimu)cmacpiB240
CSPI02G10380Cucurbita maxima (Rimu)cmacpiB354
CSPI02G10380Cucurbita maxima (Rimu)cmacpiB515
CSPI02G10380Cucurbita maxima (Rimu)cmacpiB591
CSPI02G10380Cucurbita maxima (Rimu)cmacpiB825
CSPI02G10380Cucurbita maxima (Rimu)cmacpiB899
CSPI02G10380Cucurbita moschata (Rifu)cmocpiB503
CSPI02G10380Cucurbita moschata (Rifu)cmocpiB228
CSPI02G10380Cucurbita moschata (Rifu)cmocpiB346
CSPI02G10380Cucurbita moschata (Rifu)cmocpiB580
CSPI02G10380Cucurbita moschata (Rifu)cmocpiB812
CSPI02G10380Cucurbita moschata (Rifu)cmocpiB879
CSPI02G10380Cucumber (Chinese Long) v2cpicuB069
CSPI02G10380Cucumber (Chinese Long) v2cpicuB073
CSPI02G10380Melon (DHL92) v3.5.1cpimeB144
CSPI02G10380Watermelon (Charleston Gray)cpiwcgB141
CSPI02G10380Watermelon (Charleston Gray)cpiwcgB156
CSPI02G10380Watermelon (Charleston Gray)cpiwcgB163
CSPI02G10380Watermelon (97103) v1cpiwmB125
CSPI02G10380Watermelon (97103) v1cpiwmB121
CSPI02G10380Watermelon (97103) v1cpiwmB174