CSPI02G10380.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI02G10380.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 10456361 .. 10456570 (+)
Sequence length210
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCTTATTCCAATTGCAAGGAACACCATGGCTGA

mRNA sequence

ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCTTATTCCAATTGCAAGGAACACCATGGCTGA

Coding sequence (CDS)

ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCTTATTCCAATTGCAAGGAACACCATGGCTGA
Homology
[Close]
BLAST of CSPI02G10380.1 vs. TrEMBL
Match: A0A0A0LII8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G176170 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.7e-32
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60
          MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP
Sbjct: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60

Query: 61 YSNCKEHHG 70
          +SNCKEHHG
Sbjct: 61 HSNCKEHHG 69

[Close]
BLAST of CSPI02G10380.1 vs. NCBI nr
Match: gi|700206484|gb|KGN61603.1| (hypothetical protein Csa_2G176170 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-31
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60
          MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP
Sbjct: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60

Query: 61 YSNCKEHHG 70
          +SNCKEHHG
Sbjct: 61 HSNCKEHHG 69

The following BLAST results are available for this feature:
BLAST of CSPI02G10380.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G10380.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LII8_CUCSA8.7e-3298.55Uncharacterized protein OS=Cucumis sativus GN=Csa_2G176170 PE=4 SV=1[more]
BLAST of CSPI02G10380.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G10380.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206484|gb|KGN61603.1|1.2e-3198.55hypothetical protein Csa_2G176170 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI02G10380CSPI02G10380gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI02G10380.1CSPI02G10380.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI02G10380.1.cds1CSPI02G10380.1.cds1CDS