CSPI02G07030 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G07030
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 5841190 .. 5841375 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGCTCAAAGCAGTCCACCAAATGGAATAATGTACAATTCAGATCGACACTAAGGTATCTTCATGCGGCTTTATGCAGCATCATTCCAGTGCCTGAAGATCCTCAAGAAATAGCAACGCCCCTATCGCAGAACGACTTTTCAGTATGCAACGAGGGAGAATCTTCTCAAATGTCACCTTAA

mRNA sequence

ATGTGGAGCTCAAAGCAGTCCACCAAATGGAATAATGTACAATTCAGATCGACACTAAGGTATCTTCATGCGGCTTTATGCAGCATCATTCCAGTGCCTGAAGATCCTCAAGAAATAGCAACGCCCCTATCGCAGAACGACTTTTCAGTATGCAACGAGGGAGAATCTTCTCAAATGTCACCTTAA

Coding sequence (CDS)

ATGTGGAGCTCAAAGCAGTCCACCAAATGGAATAATGTACAATTCAGATCGACACTAAGGTATCTTCATGCGGCTTTATGCAGCATCATTCCAGTGCCTGAAGATCCTCAAGAAATAGCAACGCCCCTATCGCAGAACGACTTTTCAGTATGCAACGAGGGAGAATCTTCTCAAATGTCACCTTAA
Homology
[Close]
BLAST of CSPI02G07030 vs. TrEMBL
Match: A0A0A0LKG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G073050 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-24
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = 1 

Query: 1  MWSSKQSTKWNNVQFRSTLRYLHAALCSIIPVPEDPQEIATPLSQNDFSVCNEGESSQMS 60
          MWSSKQS +WNNVQFRSTLRYLHAALCSIIPV EDPQEIATPLS NDF+VCNEGESSQ+S
Sbjct: 1  MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLS 60

Query: 61 P 62
          P
Sbjct: 61 P 61

[Close]
BLAST of CSPI02G07030 vs. TrEMBL
Match: A0A0A0KM31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G201330 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-09
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 1 

Query: 5  KQSTKWNNVQFRSTLRYLHAALCSIIPVPEDPQEIATPLSQNDFSVCNEGESSQ 59
          +QS + N+VQFRSTL+ LHA +CSIIPVP+ P EIATPL+QN  +V +E ESS+
Sbjct: 15 EQSDRRNDVQFRSTLKGLHATICSIIPVPKVPPEIATPLTQNYTAVRSEAESSR 68

[Close]
BLAST of CSPI02G07030 vs. NCBI nr
Match: gi|700206123|gb|KGN61242.1| (hypothetical protein Csa_2G073050 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-24
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = 1 

Query: 1  MWSSKQSTKWNNVQFRSTLRYLHAALCSIIPVPEDPQEIATPLSQNDFSVCNEGESSQMS 60
          MWSSKQS +WNNVQFRSTLRYLHAALCSIIPV EDPQEIATPLS NDF+VCNEGESSQ+S
Sbjct: 1  MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLS 60

Query: 61 P 62
          P
Sbjct: 61 P 61

[Close]
BLAST of CSPI02G07030 vs. NCBI nr
Match: gi|700195471|gb|KGN50648.1| (hypothetical protein Csa_5G201330 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 4.5e-09
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 1 

Query: 5  KQSTKWNNVQFRSTLRYLHAALCSIIPVPEDPQEIATPLSQNDFSVCNEGESSQ 59
          +QS + N+VQFRSTL+ LHA +CSIIPVP+ P EIATPL+QN  +V +E ESS+
Sbjct: 15 EQSDRRNDVQFRSTLKGLHATICSIIPVPKVPPEIATPLTQNYTAVRSEAESSR 68

The following BLAST results are available for this feature:
BLAST of CSPI02G07030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G07030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKG8_CUCSA1.6e-2490.16Uncharacterized protein OS=Cucumis sativus GN=Csa_2G073050 PE=4 SV=1[more]
A0A0A0KM31_CUCSA3.1e-0962.96Uncharacterized protein OS=Cucumis sativus GN=Csa_5G201330 PE=4 SV=1[more]
BLAST of CSPI02G07030 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G07030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206123|gb|KGN61242.1|2.2e-2490.16hypothetical protein Csa_2G073050 [Cucumis sativus][more]
gi|700195471|gb|KGN50648.1|4.5e-0962.96hypothetical protein Csa_5G201330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G07030.1CSPI02G07030.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G07030Csa2G073050Cucumber (Chinese Long) v2cpicuB065
CSPI02G07030CsaV3_2G009470Cucumber (Chinese Long) v3cpicucB080
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G07030Cucurbita maxima (Rimu)cmacpiB795
CSPI02G07030Cucurbita moschata (Rifu)cmocpiB151
CSPI02G07030Cucurbita moschata (Rifu)cmocpiB784
CSPI02G07030Melon (DHL92) v3.5.1cpimeB139
CSPI02G07030Watermelon (Charleston Gray)cpiwcgB110
CSPI02G07030Watermelon (97103) v1cpiwmB166
CSPI02G07030Cucurbita pepo (Zucchini)cpecpiB094
CSPI02G07030Cucurbita pepo (Zucchini)cpecpiB812
CSPI02G07030Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G07030Melon (DHL92) v3.6.1cpimedB132
CSPI02G07030Cucumber (Gy14) v2cgybcpiB056
CSPI02G07030Silver-seed gourdcarcpiB0005
CSPI02G07030Silver-seed gourdcarcpiB0191
CSPI02G07030Watermelon (97103) v2cpiwmbB111
CSPI02G07030Wax gourdcpiwgoB139
CSPI02G07030Cucumber (Gy14) v1cgycpiB284
CSPI02G07030Cucurbita maxima (Rimu)cmacpiB166