Csa2G073050 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G073050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 5709253 .. 5709438 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGCTCAAAGCAGTCCGCCAGATGGAATAATGTACAATTCAGATCGACACTAAGGTATCTTCATGCGGCTTTATGCAGCATCATTCCAGTGCATGAAGATCCTCAAGAAATAGCAACGCCCCTATCGCATAACGACTTTGCAGTATGCAACGAGGGAGAATCTTCTCAACTGTCACCTTAA

mRNA sequence

ATGTGGAGCTCAAAGCAGTCCGCCAGATGGAATAATGTACAATTCAGATCGACACTAAGGTATCTTCATGCGGCTTTATGCAGCATCATTCCAGTGCATGAAGATCCTCAAGAAATAGCAACGCCCCTATCGCATAACGACTTTGCAGTATGCAACGAGGGAGAATCTTCTCAACTGTCACCTTAA

Coding sequence (CDS)

ATGTGGAGCTCAAAGCAGTCCGCCAGATGGAATAATGTACAATTCAGATCGACACTAAGGTATCTTCATGCGGCTTTATGCAGCATCATTCCAGTGCATGAAGATCCTCAAGAAATAGCAACGCCCCTATCGCATAACGACTTTGCAGTATGCAACGAGGGAGAATCTTCTCAACTGTCACCTTAA

Protein sequence

MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLSP*
Homology
[Close]
BLAST of Csa2G073050 vs. TrEMBL
Match: A0A0A0LKG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G073050 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.2e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLS 60
          MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLS
Sbjct: 1  MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLS 60

Query: 61 P 62
          P
Sbjct: 61 P 61

[Close]
BLAST of Csa2G073050 vs. TrEMBL
Match: A0A0A0KM31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G201330 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.5e-08
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 1 

Query: 5  KQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQ 59
          +QS R N+VQFRSTL+ LHA +CSIIPV + P EIATPL+ N  AV +E ESS+
Sbjct: 15 EQSDRRNDVQFRSTLKGLHATICSIIPVPKVPPEIATPLTQNYTAVRSEAESSR 68

[Close]
BLAST of Csa2G073050 vs. NCBI nr
Match: gi|700206123|gb|KGN61242.1| (hypothetical protein Csa_2G073050 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 7.4e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLS 60
          MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLS
Sbjct: 1  MWSSKQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQLS 60

Query: 61 P 62
          P
Sbjct: 61 P 61

[Close]
BLAST of Csa2G073050 vs. NCBI nr
Match: gi|700195471|gb|KGN50648.1| (hypothetical protein Csa_5G201330 [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 5.0e-08
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 1 

Query: 5  KQSARWNNVQFRSTLRYLHAALCSIIPVHEDPQEIATPLSHNDFAVCNEGESSQ 59
          +QS R N+VQFRSTL+ LHA +CSIIPV + P EIATPL+ N  AV +E ESS+
Sbjct: 15 EQSDRRNDVQFRSTLKGLHATICSIIPVPKVPPEIATPLTQNYTAVRSEAESSR 68

The following BLAST results are available for this feature:
BLAST of Csa2G073050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKG8_CUCSA5.2e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G073050 PE=4 SV=1[more]
A0A0A0KM31_CUCSA3.5e-0862.96Uncharacterized protein OS=Cucumis sativus GN=Csa_5G201330 PE=4 SV=1[more]
BLAST of Csa2G073050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206123|gb|KGN61242.1|7.4e-28100.00hypothetical protein Csa_2G073050 [Cucumis sativus][more]
gi|700195471|gb|KGN50648.1|5.0e-0862.96hypothetical protein Csa_5G201330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G073050.1Csa2G073050.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G073050CSPI02G07030Wild cucumber (PI 183967)cpicuB065
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G073050Watermelon (97103) v2cuwmbB109
Csa2G073050Wax gourdcuwgoB139
Csa2G073050Cucumber (Gy14) v1cgycuB274
Csa2G073050Cucurbita maxima (Rimu)cmacuB165
Csa2G073050Cucurbita maxima (Rimu)cmacuB786
Csa2G073050Cucurbita moschata (Rifu)cmocuB150
Csa2G073050Cucurbita moschata (Rifu)cmocuB779
Csa2G073050Melon (DHL92) v3.5.1cumeB133
Csa2G073050Watermelon (Charleston Gray)cuwcgB103
Csa2G073050Watermelon (97103) v1cuwmB163
Csa2G073050Cucurbita pepo (Zucchini)cpecuB098
Csa2G073050Cucurbita pepo (Zucchini)cpecuB811
Csa2G073050Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G073050Cucumber (Gy14) v2cgybcuB056
Csa2G073050Melon (DHL92) v3.6.1cumedB132
Csa2G073050Silver-seed gourdcarcuB0005
Csa2G073050Silver-seed gourdcarcuB0184