CSPI02G04570 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G04570
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Zinc finger matrin-type 2
Location	Chr2 : 3291748 .. 3294854 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCTGTGTGTCCTATCACCTTCTTTCTCTACGTTAACATGTGATTTCACGCTTTCATTACCTTCTCTCATTTGCTGTTCTTCTGTTTTCGAATCAATTCATGTTACTTTCTTATCTTTCTTATTGGATTCTTTCTGGGATTTGTTTTTTTCAGAAGAATCCCATCTGAGTTTCGGTAGTTAGGTCAAGGTTTTTTTGGGCAGCGATGGCTCATACCAGCAATACTGTAAGTTATAGTCTCGTCTTTCGTTTTAAACCCTAACTTACTGATATTCTATTCATGCAGATTCCTCTGAGAAAAATAATTAAGAATGATCATTAATCTTTGTTATTTTTTTTTTTTTGGATTTTGGTGAGGTTTGTACTTGGAAGTAATTTGGTCGATTTCTTGTATGTAGGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGACCGTGAAAAACAGGTTGGGGCTTTTGGAAATTCTCGTTTTCATCGTCATCTTAATGCTTATTCTTTATGAGTGTTCCTCAAATGTTTCAAATTTTGCTGATTGTGACGTCTTTTATCTGTATTTCAGGAGGTTGATAGGGTTAAGTCGAAATGTAAGTGTTTCTTTTCTTCAAGTTCTTGTTGAGCAATTGCTTGTGTTCACGTGTAGCTATAGAAACTAGATTATGTAGATTTGGGTTCAGAAGGATTTAATTTGCCAACTTTCTTCAGTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGATCTTGAGTCCCGATTGGGAAAGACCCAGGTTAGTCAGGCCATTTCTCTTTCCCCGTCTTGAATTTATGTGTATTTTAGCCATTTTAATGTTGAAACTGTATTTGCACTTCTCTTTTGTATTTCTCTGGTGAAGTTAAGGCTGTCTTGAGTTGCTAATTGTTCATTTTTTCATTAACTTTCAAAATCTTTAGCATGTTAACTTTTAGGTTGTCAGATTTTCACCTGTGGCCTCTGGATGGATGCTCCTGTAGATTCAAGCTCTCTGTGGCATTATTTTTTGACATATAAGACTTATTTCTTATTTCCTGTACCGCACGTAGTGAACCAGCATGTTAGATTTCCCCTGCAAGGCATTTTTATGATGATGGGGAAATACTATTTTGTATATTCACTTTATAGTTTGTCTTACAGCTAATAGTGATGGAAAATACATATAAAAGGTTATATCCATTAGGCCTGTCTTGATGAACTCATATATGAATTGGGGAATCACACTTGATTAAAGGCAATCGACTATCACCTCATTATGAACAATATTTTCTTTGTACGTCTTGCACGTGTCAATATAATTTTCTCAATCTTAGGTTTCAGTTTGATGTGCTTAATGTCTTATGATTCTGACCTGTTTCATTCTTTTTTGATCTTTAATTCATCTTGTACAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGTATCACATTTGACCATCTTTTCTCTTAGAATTACTGGAATTAAATCTTGAATAACAATTGAGTAATTCCAAATTTAACAGTGTGTAACTTATTGACTTGAGAAGAAAAACTGGAGGATAAATGAGAGGCTTTGCATGTATGGTTTTGGTTAATGTGCTCTTGAATTGAGTGTCCCCCATTTGGTGCTTTGCGATGAAATATAAATTGCACTTGATCTCATATTGCTTTTTTTCTTCTTTATATCAATGAATTATTTTTCAGGCTGGATATTACTGTTCTGTTTGTGAATGTGTCGTCAAGGATTCTGCAAATTACTTGGATCACATCAATGGAAAGAAACGTATGTTATCCCTTTTTCTAGATCTTTAGCCAATTAAGTGGGTGAAATATATTCAGGTTTTGTATTTTCTTTACCTTCTTTTCTATTGACTCTGTGTTGTAGATCAGAGGGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTCGAACAGGTACCACCCTAAATAGTCAGAAAAATGAAACTATTTCTCATCTCTATTATTGTAAATACTCGTGAAATCTCAGTGTTCAAGAGGCTGAGTAGCTTTATATGAAATAGGTGCAAGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACACCAGGAAGCTTCACAGAGCAAGGTAAAGCTTAAGAATTCAGAGTTAGTTTTAATGAGGGGAAAAAGATAGGATTTCCCTCCCAATACTAGCGTTGGCTATTATCACTATTCTGTGTTTCATGTTTTAGAATTATGTTTCTCTTTTTTAATGATGCTATCTTCCGTTTTTCCTTAGATCTTGAAGAGCGTATACTAAAGCAGCAACAAGAAGAAGAACAACGAAAGCGCGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGGTTAGTACTATAATAACCTCACGATTTTGGCAACAATTTCTATCATGAAAAGAGGGGATCACATCTTACACTTGTGTTTATTCTCCTGGAATGTAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCCGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCCAAGAAGTGACAATTATACAGGTTCATCTTTTACGACCTTAATTAAACAAGATATGTTCCGTAGGTTGTACAACTGTGTGCTTGAGTTCTAAAAAGTTACAGGTTCATCTTCTTCAACTCGAGGCTTGAGCTTTGCTCTTGTGATCCATGTGGAGTTGCTATAATTTGAACTGATGTGCATGGGAAGACGAACTTGGGCTTCCCAGCTTCTTGGACTTGTAAGCTGTATCTTTTAAAGATAATCTGGCCTTTTTCTGTAACATTAAATTAATATGTTATTAGTATACAATGTTTCTTGATGTCTGGAGATGAAGTTTGTTGCTGAGGCAGATTTTAGATGAACTTAATCCAAAAAATGAGAAAGAATATATTAGGTTTTTCAAATATTGGCTGTGAACACCCCTGTGAGGTGCAAAAAGTGAGTGATGTTAAATAATGAGATTTGGGGTATTAAAAGTTAGCCTAACTCAATGGTACATGTCCCCTTCAAATTCATTTGATTTAATCATGGAATACTCAATTTTACAGAGGAAAAGGTTTTGACA

mRNA sequence

ATGGCTCATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGACCGTGAAAAACAGGAGGTTGATAGGGTTAAGTCGAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGATCTTGAGTCCCGATTGGGAAAGACCCAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATATTACTGTTCTGTTTGTGAATGTGTCGTCAAGGATTCTGCAAATTACTTGGATCACATCAATGGAAAGAAACATCAGAGGGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTCGAACAGGTGCAAGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACACCAGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAGCAACAAGAAGAAGAACAACGAAAGCGCGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCCGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCCAAGAAGTGA

Coding sequence (CDS)

ATGGCTCATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGACCGTGAAAAACAGGAGGTTGATAGGGTTAAGTCGAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGATCTTGAGTCCCGATTGGGAAAGACCCAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATATTACTGTTCTGTTTGTGAATGTGTCGTCAAGGATTCTGCAAATTACTTGGATCACATCAATGGAAAGAAACATCAGAGGGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTCGAACAGGTGCAAGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACACCAGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAGCAACAAGAAGAAGAACAACGAAAGCGCGAGCGTCGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCCGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCCAAGAAGTGA

Homology

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BLAST of CSPI02G04570 vs. Swiss-Prot
Match: ZMAT2_HUMAN (Zinc finger matrin-type protein 2 OS=Homo sapiens GN=ZMAT2 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.9e-41
Identity = 100/188 (53.19%), Postives = 138/188 (73.40%), Query Frame = 1


Query: 15  FRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTP 74
           FRRK+D++EY + A  R  +E ++   K    PV+R+ L+HRDY+VDLES+LGKT V+T 
Sbjct: 12  FRRKWDKDEYEKLAEKRLTEEREKKDGK-PVQPVKRELLRHRDYKVDLESKLGKTIVITK 71

Query: 75  VAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLK 134
             P S+  GYYC+VC+CVVKDS N+LDHINGKKHQR LGMSMRVER++L+QV++RFEV K
Sbjct: 72  TTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNK 131

Query: 135 KRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGF 194
           K K      + D EER+ + ++EEE+ K  ++E++KEKK+    +   E D ++AA+MGF
Sbjct: 132 K-KMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDEMAAVMGF 191

Query: 195 GGFRSSKK 203
            GF S+KK
Sbjct: 192 SGFGSTKK 197

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BLAST of CSPI02G04570 vs. Swiss-Prot
Match: ZMAT2_MOUSE (Zinc finger matrin-type protein 2 OS=Mus musculus GN=Zmat2 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.9e-41
Identity = 100/188 (53.19%), Postives = 138/188 (73.40%), Query Frame = 1


Query: 15  FRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTP 74
           FRRK+D++EY + A  R  +E ++   K    PV+R+ L+HRDY+VDLES+LGKT V+T 
Sbjct: 12  FRRKWDKDEYEKLAEKRLTEEREKKDGK-PVQPVKRELLRHRDYKVDLESKLGKTIVITK 71

Query: 75  VAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLK 134
             P S+  GYYC+VC+CVVKDS N+LDHINGKKHQR LGMSMRVER++L+QV++RFEV K
Sbjct: 72  TTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNK 131

Query: 135 KRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGF 194
           K K      + D EER+ + ++EEE+ K  ++E++KEKK+    +   E D ++AA+MGF
Sbjct: 132 K-KMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDEMAAVMGF 191

Query: 195 GGFRSSKK 203
            GF S+KK
Sbjct: 192 SGFGSTKK 197

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BLAST of CSPI02G04570 vs. Swiss-Prot
Match: SNU23_CAEEL (Putative zinc finger matrin-type protein snu-23 OS=Caenorhabditis elegans GN=snu-23 PE=3 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-30
Identity = 83/215 (38.60%), Postives = 140/215 (65.12%), Query Frame = 1


Query: 4   TSNTAAGVDNTFRRKFDREEYLERARDR-----EKQEVDRVKSKLKGPPVQRKPLKHRDY 63
           + + A+G ++  RR +D +EY   A+ R     E +++   K K   P V+R+ L+ R+Y
Sbjct: 7   SGSQASGTNH--RRTWDEKEYSLAAQQRLLDEKEAEDIRLGKKKKDEPKVKREMLQAREY 66

Query: 64  EVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRV 123
           +VDL+S++GK+ V+T   P ++  G+YC VC+CVVKDS N+LDHINGK HQR +GMSM+ 
Sbjct: 67  KVDLDSKVGKSVVITKATPSAETGGFYCDVCDCVVKDSINFLDHINGKNHQRNIGMSMKT 126

Query: 124 ERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQR--------KRERRERKK 183
           +++++  V+ERF+++K +K       Q   E++L+  QEEE R        K + R+RK+
Sbjct: 127 KKSTVADVRERFKLMKDKKEREKKEAQ--VEQLLEDVQEEEARMADFKKDKKTDNRKRKR 186

Query: 184 EKKKEKAAEEEPE---VDPDVAAMMGFGGFRSSKK 203
           + +K++  +++ +   +DP++ AMMGF GF +SK+
Sbjct: 187 DTRKDEEEDDDEDDSGLDPEIRAMMGFSGFSTSKR 217

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BLAST of CSPI02G04570 vs. TrEMBL
Match: A0A0A0LM02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G033890 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.1e-102
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1


Query: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEV 60
           MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEV
Sbjct: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEV 60

Query: 61  DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER 120
           DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER
Sbjct: 61  DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER 120

Query: 121 ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE 180
           ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE
Sbjct: 121 ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE 180

Query: 181 EPEVDPDVAAMMGFGGFRSSKK 203
           EPEVDPDVAAMMGFGGFRSSKK
Sbjct: 181 EPEVDPDVAAMMGFGGFRSSKK 202

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BLAST of CSPI02G04570 vs. TrEMBL
Match: D7UA14_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01370 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-90
Identity = 182/204 (89.22%), Postives = 194/204 (95.10%), Query Frame = 1


Query: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVD--RVKSKLKGPPVQRKPLKHRDY 60
           MA +SN A GVDNTFRRKFD+EEYLERAR RE++E +  R KSK KGPPVQRKPLKHRDY
Sbjct: 1   MAQSSNNAVGVDNTFRRKFDKEEYLERARKREQEEEEGGRHKSKSKGPPVQRKPLKHRDY 60

Query: 61  EVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRV 120
           EVDLESRLGKTQVVTP+APLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRV
Sbjct: 61  EVDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRV 120

Query: 121 ERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAA 180
           ERASL+QVQERFEVLKKR+TPGSFTEQDL+ERILKQQQEEE+RKR+RRERKKEKKKEKA 
Sbjct: 121 ERASLQQVQERFEVLKKRRTPGSFTEQDLDERILKQQQEEEERKRQRRERKKEKKKEKAV 180

Query: 181 EEEPEVDPDVAAMMGFGGFRSSKK 203
           EEEPE+DPDVAAMMGFGGFRSSKK
Sbjct: 181 EEEPELDPDVAAMMGFGGFRSSKK 204

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BLAST of CSPI02G04570 vs. TrEMBL
Match: A0A0B0MXS7_GOSAR (Zinc finger matrin-type 2 OS=Gossypium arboreum GN=F383_30785 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 5.9e-89
Identity = 179/199 (89.95%), Postives = 190/199 (95.48%), Query Frame = 1


Query: 5   SNTAAGVDNTFRRKFDREEYLERARDREKQEVD-RVKSKLKGPPVQRKPLKHRDYEVDLE 64
           +N   GVDNTFR+KFDREEYLERAR+REKQEV+ R KSK KGPPVQRKPLKHRDYEVDLE
Sbjct: 4   NNNTLGVDNTFRKKFDREEYLERAREREKQEVEGRNKSKAKGPPVQRKPLKHRDYEVDLE 63

Query: 65  SRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL 124
           SRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL
Sbjct: 64  SRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL 123

Query: 125 EQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPE 184
           +QVQERFE LKKRK PGSFTEQDL+ERI+KQQ+EEE+RKR+RRERKKEKKKEKAAEEEPE
Sbjct: 124 KQVQERFEQLKKRKPPGSFTEQDLDERIIKQQEEEEERKRQRRERKKEKKKEKAAEEEPE 183

Query: 185 VDPDVAAMMGFGGFRSSKK 203
           +DPDVAAMMGFGGF SSKK
Sbjct: 184 IDPDVAAMMGFGGFGSSKK 202

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BLAST of CSPI02G04570 vs. TrEMBL
Match: A0A061F406_THECC (C2H2 and C2HC zinc fingers superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_026747 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 7.7e-89
Identity = 177/200 (88.50%), Postives = 192/200 (96.00%), Query Frame = 1


Query: 4   TSNTAAGVDNTFRRKFDREEYLERARDREKQEVD-RVKSKLKGPPVQRKPLKHRDYEVDL 63
           +SN A GVDNTFR+KFDREEYL+RAR+REKQE + R KSK KGPPVQRKPLKHRDYEVDL
Sbjct: 3   SSNNALGVDNTFRKKFDREEYLQRAREREKQESEGRSKSKAKGPPVQRKPLKHRDYEVDL 62

Query: 64  ESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERAS 123
           ESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERA+
Sbjct: 63  ESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERAT 122

Query: 124 LEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEP 183
           L+QVQERF+ LKKRK PGSF+EQDL+ERI+KQQ+EEE+RKR+RRERKKEKKKEKAAEEEP
Sbjct: 123 LQQVQERFDQLKKRKAPGSFSEQDLDERIIKQQEEEEERKRQRRERKKEKKKEKAAEEEP 182

Query: 184 EVDPDVAAMMGFGGFRSSKK 203
           E+DPDVAAMMGFGGFRSSKK
Sbjct: 183 EIDPDVAAMMGFGGFRSSKK 202

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BLAST of CSPI02G04570 vs. TrEMBL
Match: A0A059B2U0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03282 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.7e-88
Identity = 178/203 (87.68%), Postives = 191/203 (94.09%), Query Frame = 1


Query: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVD-RVKSKLKGPPVQRKPLKHRDYE 60
           M +TSN A GVDNTFRRKFDREEYLERAR+REK+E D R KSK KGPPVQRKPLKHRDYE
Sbjct: 1   MVNTSNNAVGVDNTFRRKFDREEYLERAREREKEEADPRHKSKSKGPPVQRKPLKHRDYE 60

Query: 61  VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE 120
           VDLESRLGKTQVVTP+APLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE
Sbjct: 61  VDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE 120

Query: 121 RASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAE 180
           RASLEQVQ RFE LKKRK PG+FTEQDL+ERILKQQ+EEE+RKR++RE+KKEKKKEKA E
Sbjct: 121 RASLEQVQGRFEQLKKRKPPGTFTEQDLDERILKQQEEEEERKRQKREKKKEKKKEKAQE 180

Query: 181 EEPEVDPDVAAMMGFGGFRSSKK 203
           EEPE+DP+VAAMMGFGGF SSKK
Sbjct: 181 EEPEMDPEVAAMMGFGGFGSSKK 203

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BLAST of CSPI02G04570 vs. TAIR10
Match: AT3G05760.1 (AT3G05760.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 310.8 bits (795), Expect = 6.0e-85
Identity = 164/199 (82.41%), Postives = 181/199 (90.95%), Query Frame = 1


Query: 4   TSNTAAGVDNTFRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEVDLE 63
           +SNT  GVDNTFR+KFD EE+ ERAR+REK+E DR KS+ KGPPVQR PLKHRDY VDLE
Sbjct: 3   SSNTTTGVDNTFRKKFDVEEFKERAREREKKESDRSKSRSKGPPVQRAPLKHRDYHVDLE 62

Query: 64  SRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL 123
           SRLGKTQVVTPVAPLSQQAGY+C VC+CVVKDSANYLDHINGKKHQRALGMSMRVER+SL
Sbjct: 63  SRLGKTQVVTPVAPLSQQAGYFCRVCDCVVKDSANYLDHINGKKHQRALGMSMRVERSSL 122

Query: 124 EQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPE 183
           EQVQERFEVLKKRK PG+FTEQDL+ERI KQQ+EEE+ KR+RRE+KKEKKK K  EEEPE
Sbjct: 123 EQVQERFEVLKKRKAPGTFTEQDLDERIRKQQEEEEELKRQRREKKKEKKKGKVVEEEPE 182

Query: 184 VDPDVAAMMGFGGFRSSKK 203
           +DP+VA MMGFGGF SSKK
Sbjct: 183 MDPEVAEMMGFGGFGSSKK 201

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BLAST of CSPI02G04570 vs. NCBI nr
Match: gi|778667012|ref|XP_011648855.1| (PREDICTED: zinc finger matrin-type protein 2 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 8.7e-102
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1


Query: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEV 60
           MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEV
Sbjct: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEV 60

Query: 61  DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER 120
           DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER
Sbjct: 61  DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER 120

Query: 121 ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE 180
           ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE
Sbjct: 121 ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE 180

Query: 181 EPEVDPDVAAMMGFGGFRSSKK 203
           EPEVDPDVAAMMGFGGFRSSKK
Sbjct: 181 EPEVDPDVAAMMGFGGFRSSKK 202

[Close]

BLAST of CSPI02G04570 vs. NCBI nr
Match: gi|659070162|ref|XP_008453709.1| (PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo])

HSP 1 Score: 375.2 bits (962), Expect = 7.4e-101
Identity = 200/202 (99.01%), Postives = 202/202 (100.00%), Query Frame = 1


Query: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVDRVKSKLKGPPVQRKPLKHRDYEV 60
           MAHTSNTAAGVDNTFRRKFDREEYLERAR+REKQEV+RVKSKLKGPPVQRKPLKHRDYEV
Sbjct: 1   MAHTSNTAAGVDNTFRRKFDREEYLERAREREKQEVERVKSKLKGPPVQRKPLKHRDYEV 60

Query: 61  DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER 120
           DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER
Sbjct: 61  DLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER 120

Query: 121 ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE 180
           ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE
Sbjct: 121 ASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEE 180

Query: 181 EPEVDPDVAAMMGFGGFRSSKK 203
           EPEVDPDVAAMMGFGGFRSSKK
Sbjct: 181 EPEVDPDVAAMMGFGGFRSSKK 202

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BLAST of CSPI02G04570 vs. NCBI nr
Match: gi|359487537|ref|XP_002282596.2| (PREDICTED: zinc finger matrin-type protein 2 isoform X2 [Vitis vinifera])

HSP 1 Score: 340.9 bits (873), Expect = 1.5e-90
Identity = 182/204 (89.22%), Postives = 194/204 (95.10%), Query Frame = 1


Query: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVD--RVKSKLKGPPVQRKPLKHRDY 60
           MA +SN A GVDNTFRRKFD+EEYLERAR RE++E +  R KSK KGPPVQRKPLKHRDY
Sbjct: 1   MAQSSNNAVGVDNTFRRKFDKEEYLERARKREQEEEEGGRHKSKSKGPPVQRKPLKHRDY 60

Query: 61  EVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRV 120
           EVDLESRLGKTQVVTP+APLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRV
Sbjct: 61  EVDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRV 120

Query: 121 ERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAA 180
           ERASL+QVQERFEVLKKR+TPGSFTEQDL+ERILKQQQEEE+RKR+RRERKKEKKKEKA 
Sbjct: 121 ERASLQQVQERFEVLKKRRTPGSFTEQDLDERILKQQQEEEERKRQRRERKKEKKKEKAV 180

Query: 181 EEEPEVDPDVAAMMGFGGFRSSKK 203
           EEEPE+DPDVAAMMGFGGFRSSKK
Sbjct: 181 EEEPELDPDVAAMMGFGGFRSSKK 204

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BLAST of CSPI02G04570 vs. NCBI nr
Match: gi|1009116675|ref|XP_015874903.1| (PREDICTED: zinc finger matrin-type protein 2 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 336.7 bits (862), Expect = 2.9e-89
Identity = 180/203 (88.67%), Postives = 190/203 (93.60%), Query Frame = 1


Query: 1   MAHTSNTAAGVDNTFRRKFDREEYLERARDREKQEVD-RVKSKLKGPPVQRKPLKHRDYE 60
           MAH SN A GVDNTFRRKFDREEYLERAR+REKQE + R KSK KGP VQRKPLKHRDYE
Sbjct: 1   MAHNSNNAGGVDNTFRRKFDREEYLERAREREKQEAEGRTKSKSKGPSVQRKPLKHRDYE 60

Query: 61  VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE 120
           VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE
Sbjct: 61  VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE 120

Query: 121 RASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAE 180
           RASL QV++RFE+LKKRK PGSFTEQDL+ERILKQQQE+E+RKR+RRERKKEKKKEK  E
Sbjct: 121 RASLNQVKDRFELLKKRKVPGSFTEQDLDERILKQQQEDEERKRQRRERKKEKKKEKVEE 180

Query: 181 EEPEVDPDVAAMMGFGGFRSSKK 203
           EE E+DPDVAAMMGFGGFRSSKK
Sbjct: 181 EETEMDPDVAAMMGFGGFRSSKK 203

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BLAST of CSPI02G04570 vs. NCBI nr
Match: gi|728824066|gb|KHG05590.1| (Zinc finger matrin-type 2 [Gossypium arboreum])

HSP 1 Score: 335.1 bits (858), Expect = 8.5e-89
Identity = 179/199 (89.95%), Postives = 190/199 (95.48%), Query Frame = 1


Query: 5   SNTAAGVDNTFRRKFDREEYLERARDREKQEVD-RVKSKLKGPPVQRKPLKHRDYEVDLE 64
           +N   GVDNTFR+KFDREEYLERAR+REKQEV+ R KSK KGPPVQRKPLKHRDYEVDLE
Sbjct: 4   NNNTLGVDNTFRKKFDREEYLERAREREKQEVEGRNKSKAKGPPVQRKPLKHRDYEVDLE 63

Query: 65  SRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL 124
           SRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL
Sbjct: 64  SRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASL 123

Query: 125 EQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPE 184
           +QVQERFE LKKRK PGSFTEQDL+ERI+KQQ+EEE+RKR+RRERKKEKKKEKAAEEEPE
Sbjct: 124 KQVQERFEQLKKRKPPGSFTEQDLDERIIKQQEEEEERKRQRRERKKEKKKEKAAEEEPE 183

Query: 185 VDPDVAAMMGFGGFRSSKK 203
           +DPDVAAMMGFGGF SSKK
Sbjct: 184 IDPDVAAMMGFGGFGSSKK 202

The following BLAST results are available for this feature:

BLAST of CSPI02G04570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZMAT2_HUMAN	3.9e-41	53.19	Zinc finger matrin-type protein 2 OS=Homo sapiens GN=ZMAT2 PE=1 SV=1	[more]
ZMAT2_MOUSE	3.9e-41	53.19	Zinc finger matrin-type protein 2 OS=Mus musculus GN=Zmat2 PE=2 SV=1	[more]
SNU23_CAEEL	5.2e-30	38.60	Putative zinc finger matrin-type protein snu-23 OS=Caenorhabditis elegans GN=snu...	[more]

BLAST of CSPI02G04570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM02_CUCSA	6.1e-102	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G033890 PE=4 SV=1	[more]
D7UA14_VITVI	1.1e-90	89.22	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01370 PE=4 SV=...	[more]
A0A0B0MXS7_GOSAR	5.9e-89	89.95	Zinc finger matrin-type 2 OS=Gossypium arboreum GN=F383_30785 PE=4 SV=1	[more]
A0A061F406_THECC	7.7e-89	88.50	C2H2 and C2HC zinc fingers superfamily protein isoform 1 OS=Theobroma cacao GN=T...	[more]
A0A059B2U0_EUCGR	1.7e-88	87.68	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03282 PE=4 SV=1	[more]

BLAST of CSPI02G04570 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05760.1	6.0e-85	82.41	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of CSPI02G04570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778667012\|ref\|XP_011648855.1\|	8.7e-102	100.00	PREDICTED: zinc finger matrin-type protein 2 [Cucumis sativus]	[more]
gi\|659070162\|ref\|XP_008453709.1\|	7.4e-101	99.01	PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo]	[more]
gi\|359487537\|ref\|XP_002282596.2\|	1.5e-90	89.22	PREDICTED: zinc finger matrin-type protein 2 isoform X2 [Vitis vinifera]	[more]
gi\|1009116675\|ref\|XP_015874903.1\|	2.9e-89	88.67	PREDICTED: zinc finger matrin-type protein 2 isoform X1 [Ziziphus jujuba]	[more]
gi\|728824066\|gb\|KHG05590.1\|	8.5e-89	89.95	Zinc finger matrin-type 2 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003604	Matrin/U1-like-C_Znf_C2H2
IPR022755	Znf_C2H2_jaz
IPR003604	Matrin/U1-like-C_Znf_C2H2
IPR022755	Znf_C2H2_jaz

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G04570.2	CSPI02G04570.2	mRNA
CSPI02G04570.1	CSPI02G04570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Zinc finger, U1-type	SMART	SM00451	ZnF_U1_5	coord: 81..115 score: 2.
IPR022755	Zinc finger, double-stranded RNA binding	PFAM	PF12171	zf-C2H2_jaz	coord: 84..109 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 116..136 score: -coord: 144..181 scor
None	No IPR available	PANTHER	PTHR23067	DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN	coord: 4..202 score: 1.8
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 79..125 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G04570	Cla019956	Watermelon (97103) v1	cpiwmB149
CSPI02G04570	Csa2G033890	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G04570	MELO3C004198	Melon (DHL92) v3.5.1	cpimeB139
CSPI02G04570	ClCG02G015080	Watermelon (Charleston Gray)	cpiwcgB128
CSPI02G04570	Lsi11G006190	Bottle gourd (USVL1VR-Ls)	cpilsiB096
CSPI02G04570	MELO3C004198.2	Melon (DHL92) v3.6.1	cpimedB132
CSPI02G04570	CsaV3_2G006940	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G04570	Cla97C02G040860	Watermelon (97103) v2	cpiwmbB120
CSPI02G04570	Bhi06G001321	Wax gourd	cpiwgoB129
CSPI02G04570	Cucsa.090800	Cucumber (Gy14) v1	cgycpiB097
CSPI02G04570	CmaCh05G010800	Cucurbita maxima (Rimu)	cmacpiB800
CSPI02G04570	CmaCh12G010380	Cucurbita maxima (Rimu)	cmacpiB174
CSPI02G04570	CmoCh05G010940	Cucurbita moschata (Rifu)	cmocpiB787
CSPI02G04570	CmoCh12G010480	Cucurbita moschata (Rifu)	cmocpiB159
CSPI02G04570	Cp4.1LG07g08710	Cucurbita pepo (Zucchini)	cpecpiB821
CSPI02G04570	CsGy2G004710	Cucumber (Gy14) v2	cgybcpiB056
CSPI02G04570	Carg23270	Silver-seed gourd	carcpiB0916

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G04570	Cucurbita pepo (Zucchini)	cpecpiB100
CSPI02G04570	Bottle gourd (USVL1VR-Ls)	cpilsiB087
CSPI02G04570	Bottle gourd (USVL1VR-Ls)	cpilsiB134
CSPI02G04570	Melon (DHL92) v3.6.1	cpimedB109
CSPI02G04570	Silver-seed gourd	carcpiB0073
CSPI02G04570	Silver-seed gourd	carcpiB0596
CSPI02G04570	Cucumber (Chinese Long) v3	cpicucB078
CSPI02G04570	Watermelon (97103) v2	cpiwmbB154
CSPI02G04570	Cucurbita maxima (Rimu)	cmacpiB357
CSPI02G04570	Cucurbita maxima (Rimu)	cmacpiB900
CSPI02G04570	Cucurbita moschata (Rifu)	cmocpiB349
CSPI02G04570	Cucumber (Chinese Long) v2	cpicuB063
CSPI02G04570	Melon (DHL92) v3.5.1	cpimeB113
CSPI02G04570	Watermelon (Charleston Gray)	cpiwcgB161
CSPI02G04570	Watermelon (97103) v1	cpiwmB120
CSPI02G04570	Watermelon (97103) v1	cpiwmB180