CSPI02G02120 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G02120
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 1487895 .. 1488062 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGAGAAGACAACCCACCATGATCGACGTCGAAATCGAGGATAAGGAAGAACTCGAACAACTCCGTAAACGCCCCGCCGCCGCCTCCACCTACTCCTCTCTCCTCCATAACCTCAGTCGGAATAAAGACCCGGCCTCCAAAGCTCAGCGACTCGGTATTTCCTCT

mRNA sequence

ATGCTGAGAAGACAACCCACCATGATCGACGTCGAAATCGAGGATAAGGAAGAACTCGAACAACTCCGTAAACGCCCCGCCGCCGCCTCCACCTACTCCTCTCTCCTCCATAACCTCAGTCGGAATAAAGACCCGGCCTCCAAAGCTCAGCGACTCGGTATTTCCTCT

Coding sequence (CDS)

ATGCTGAGAAGACAACCCACCATGATCGACGTCGAAATCGAGGATAAGGAAGAACTCGAACAACTCCGTAAACGCCCCGCCGCCGCCTCCACCTACTCCTCTCTCCTCCATAACCTCAGTCGGAATAAAGACCCGGCCTCCAAAGCTCAGCGACTCGGTATTTCCTCT
Homology
[Close]
BLAST of CSPI02G02120 vs. TrEMBL
Match: A0A0A0LI59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008400 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-20
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAASTYSSLLHNLSRNKDPASKAQRLGISS 57
          MLRRQPTMIDVEIEDKEELEQLRKRPAAASTYSSLLHNLSRNKDPASKAQRLGISS
Sbjct: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAASTYSSLLHNLSRNKDPASKAQRLGISS 56

[Close]
BLAST of CSPI02G02120 vs. TrEMBL
Match: A0A0A0LFB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008650 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.8e-11
Identity = 44/68 (64.71%), Postives = 49/68 (72.06%), Query Frame = 1 

Query: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAA------------STYSSLLHNLSRNKDPASK 57
          MLRRQP+ I+V+IEDKEELEQ RKR AAA            S   SLLHN++RNKD ASK
Sbjct: 1  MLRRQPSKIEVKIEDKEELEQARKRAAAAASTTTTTTTDATSAAGSLLHNINRNKDQASK 60

[Close]
BLAST of CSPI02G02120 vs. TrEMBL
Match: A0A151SRG3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_003599 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.9e-06
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAAST-------YSSLLHNLSRNKDPASKAQRLG 57
          MLRR+PT I V+IEDKEELE+ R+R AAA+         ++LL  L R +DP+SKA R+G
Sbjct: 1  MLRRKPTKIQVKIEDKEELEEARRRHAAATATPNAAPGTAALLRQLDRVEDPSSKAHRIG 60

[Close]
BLAST of CSPI02G02120 vs. NCBI nr
Match: gi|700205605|gb|KGN60724.1| (hypothetical protein Csa_2G008400 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-20
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAASTYSSLLHNLSRNKDPASKAQRLGISS 57
          MLRRQPTMIDVEIEDKEELEQLRKRPAAASTYSSLLHNLSRNKDPASKAQRLGISS
Sbjct: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAASTYSSLLHNLSRNKDPASKAQRLGISS 56

[Close]
BLAST of CSPI02G02120 vs. NCBI nr
Match: gi|700205606|gb|KGN60725.1| (hypothetical protein Csa_2G008650 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-10
Identity = 44/68 (64.71%), Postives = 49/68 (72.06%), Query Frame = 1 

Query: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAA------------STYSSLLHNLSRNKDPASK 57
          MLRRQP+ I+V+IEDKEELEQ RKR AAA            S   SLLHN++RNKD ASK
Sbjct: 1  MLRRQPSKIEVKIEDKEELEQARKRAAAAASTTTTTTTDATSAAGSLLHNINRNKDQASK 60

[Close]
BLAST of CSPI02G02120 vs. NCBI nr
Match: gi|1012346147|gb|KYP57339.1| (hypothetical protein KK1_003599 [Cajanus cajan])

HSP 1 Score: 58.5 bits (140), Expect = 4.2e-06
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAAST-------YSSLLHNLSRNKDPASKAQRLG 57
          MLRR+PT I V+IEDKEELE+ R+R AAA+         ++LL  L R +DP+SKA R+G
Sbjct: 1  MLRRKPTKIQVKIEDKEELEEARRRHAAATATPNAAPGTAALLRQLDRVEDPSSKAHRIG 60

The following BLAST results are available for this feature:
BLAST of CSPI02G02120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G02120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI59_CUCSA1.2e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008400 PE=4 SV=1[more]
A0A0A0LFB1_CUCSA8.8e-1164.71Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008650 PE=4 SV=1[more]
A0A151SRG3_CAJCA2.9e-0653.97Uncharacterized protein OS=Cajanus cajan GN=KK1_003599 PE=4 SV=1[more]
BLAST of CSPI02G02120 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G02120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205605|gb|KGN60724.1|1.8e-20100.00hypothetical protein Csa_2G008400 [Cucumis sativus][more]
gi|700205606|gb|KGN60725.1|1.3e-1064.71hypothetical protein Csa_2G008650 [Cucumis sativus][more]
gi|1012346147|gb|KYP57339.1|4.2e-0653.97hypothetical protein KK1_003599 [Cajanus cajan][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G02120.1CSPI02G02120.1mRNA