CSPI02G00650 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G00650
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 402175 .. 402591 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTCCCTAGTTGGAATGCTCGGGGTTTGGAGAGCCTTCGAGCATTCAGAGCCGTAAGTGATTTGATCCGTTCCAAAAATTCCAGTATTATGTTTTTCTCGACAAAAAGCAGAGAGGAAGTCACTAATCAGATCAAGATCGTGGGTAATTTTCCTGGTTTCTTTAAGTCAAAATGGTTCCATAAAAAGGCACCTTTAAGAAAGGAACAATACGAAACAAAGAGACGACAGATGCAAACGGTTAATGATTCGAGGATCCTTTTATCTTGAAAAGAACTTTTATTGACTATTCTTCTCCCTTCTTCTTGCCCAAGTTCTGATAATACTGGAGCTGTTAATGAGAGTATCTCCCCAAAAGCTGATGCTATAATGGATTCTATGCTCTTTTCTCCCAATGTGAGCAGTGAGCACTGA

mRNA sequence

ATGAATCTCCCTAGTTGGAATGCTCGGGGTTTGGAGAGCCTTCGAGCATTCAGAGCCGTAAGTGATTTGATCCGTTCCAAAAATTCCAGTATTATGTTTTTCTCGACAAAAAGCAGAGAGGAAGTCACTAATCAGATCAAGATCGTGGAACTTTTATTGACTATTCTTCTCCCTTCTTCTTGCCCAAGTTCTGATAATACTGGAGCTGTTAATGAGAGTATCTCCCCAAAAGCTGATGCTATAATGGATTCTATGCTCTTTTCTCCCAATGTGAGCAGTGAGCACTGA

Coding sequence (CDS)

ATGAATCTCCCTAGTTGGAATGCTCGGGGTTTGGAGAGCCTTCGAGCATTCAGAGCCGTAAGTGATTTGATCCGTTCCAAAAATTCCAGTATTATGTTTTTCTCGACAAAAAGCAGAGAGGAAGTCACTAATCAGATCAAGATCGTGGAACTTTTATTGACTATTCTTCTCCCTTCTTCTTGCCCAAGTTCTGATAATACTGGAGCTGTTAATGAGAGTATCTCCCCAAAAGCTGATGCTATAATGGATTCTATGCTCTTTTCTCCCAATGTGAGCAGTGAGCACTGA
Homology
[Close]
BLAST of CSPI02G00650 vs. TrEMBL
Match: A0A0A0LFT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000670 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.8e-41
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 1  MNLPSWNARGLESLRAFRAVSDLIRSKNSSIMFFSTKSREEVTNQIKIVELLLTILLPSS 60
          MNLPSWNARGLESLRAFRAVSDLIRSKNSSIMFFSTKS EEV NQIKI+ELLLTILLPSS
Sbjct: 1  MNLPSWNARGLESLRAFRAVSDLIRSKNSSIMFFSTKSGEEVANQIKIMELLLTILLPSS 60

Query: 61 CPSSDNTGAVNESISPKADAIMDSMLFSPNVSSEH 96
          CPS DNTGAVNESISPKADAIMDSMLFSPNVSSEH
Sbjct: 61 CPSCDNTGAVNESISPKADAIMDSMLFSPNVSSEH 95

[Close]
BLAST of CSPI02G00650 vs. NCBI nr
Match: gi|700205439|gb|KGN60558.1| (hypothetical protein Csa_2G000670 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 4.1e-41
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 1  MNLPSWNARGLESLRAFRAVSDLIRSKNSSIMFFSTKSREEVTNQIKIVELLLTILLPSS 60
          MNLPSWNARGLESLRAFRAVSDLIRSKNSSIMFFSTKS EEV NQIKI+ELLLTILLPSS
Sbjct: 1  MNLPSWNARGLESLRAFRAVSDLIRSKNSSIMFFSTKSGEEVANQIKIMELLLTILLPSS 60

Query: 61 CPSSDNTGAVNESISPKADAIMDSMLFSPNVSSEH 96
          CPS DNTGAVNESISPKADAIMDSMLFSPNVSSEH
Sbjct: 61 CPSCDNTGAVNESISPKADAIMDSMLFSPNVSSEH 95

The following BLAST results are available for this feature:
BLAST of CSPI02G00650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G00650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFT0_CUCSA2.8e-4195.79Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000670 PE=4 SV=1[more]
BLAST of CSPI02G00650 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G00650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205439|gb|KGN60558.1|4.1e-4195.79hypothetical protein Csa_2G000670 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G00650.1CSPI02G00650.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G00650Csa2G000670Cucumber (Chinese Long) v2cpicuB065
CSPI02G00650CsaV3_2G001690Cucumber (Chinese Long) v3cpicucB080
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G00650Watermelon (97103) v2cpiwmbB105
CSPI02G00650Watermelon (97103) v2cpiwmbB132
CSPI02G00650Watermelon (97103) v2cpiwmbB159
CSPI02G00650Wax gourdcpiwgoB144
CSPI02G00650Wax gourdcpiwgoB130
CSPI02G00650Wax gourdcpiwgoB211
CSPI02G00650Wild cucumber (PI 183967)cpicpiB010
CSPI02G00650Cucumber (Gy14) v1cgycpiB152
CSPI02G00650Cucumber (Gy14) v1cgycpiB438
CSPI02G00650Cucurbita maxima (Rimu)cmacpiB073
CSPI02G00650Cucurbita maxima (Rimu)cmacpiB116
CSPI02G00650Cucurbita maxima (Rimu)cmacpiB170
CSPI02G00650Cucurbita maxima (Rimu)cmacpiB174
CSPI02G00650Cucurbita maxima (Rimu)cmacpiB800
CSPI02G00650Cucurbita moschata (Rifu)cmocpiB066
CSPI02G00650Cucurbita moschata (Rifu)cmocpiB108
CSPI02G00650Cucurbita moschata (Rifu)cmocpiB156
CSPI02G00650Cucurbita moschata (Rifu)cmocpiB159
CSPI02G00650Cucurbita moschata (Rifu)cmocpiB787
CSPI02G00650Cucumber (Chinese Long) v2cpicuB061
CSPI02G00650Melon (DHL92) v3.5.1cpimeB111
CSPI02G00650Melon (DHL92) v3.5.1cpimeB131
CSPI02G00650Melon (DHL92) v3.5.1cpimeB140
CSPI02G00650Watermelon (Charleston Gray)cpiwcgB102
CSPI02G00650Watermelon (Charleston Gray)cpiwcgB140
CSPI02G00650Watermelon (Charleston Gray)cpiwcgB165
CSPI02G00650Watermelon (97103) v1cpiwmB119
CSPI02G00650Watermelon (97103) v1cpiwmB123
CSPI02G00650Watermelon (97103) v1cpiwmB165
CSPI02G00650Cucurbita pepo (Zucchini)cpecpiB100
CSPI02G00650Cucurbita pepo (Zucchini)cpecpiB105
CSPI02G00650Cucurbita pepo (Zucchini)cpecpiB370
CSPI02G00650Cucurbita pepo (Zucchini)cpecpiB545
CSPI02G00650Cucurbita pepo (Zucchini)cpecpiB665
CSPI02G00650Cucurbita pepo (Zucchini)cpecpiB818
CSPI02G00650Cucurbita pepo (Zucchini)cpecpiB822
CSPI02G00650Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G00650Bottle gourd (USVL1VR-Ls)cpilsiB133
CSPI02G00650Bottle gourd (USVL1VR-Ls)cpilsiB138
CSPI02G00650Melon (DHL92) v3.6.1cpimedB106
CSPI02G00650Melon (DHL92) v3.6.1cpimedB133
CSPI02G00650Cucumber (Gy14) v2cgybcpiB017
CSPI02G00650Cucumber (Gy14) v2cgybcpiB056
CSPI02G00650Cucumber (Gy14) v2cgybcpiB104
CSPI02G00650Silver-seed gourdcarcpiB0044
CSPI02G00650Silver-seed gourdcarcpiB0107
CSPI02G00650Silver-seed gourdcarcpiB0224
CSPI02G00650Silver-seed gourdcarcpiB0603
CSPI02G00650Silver-seed gourdcarcpiB0931
CSPI02G00650Silver-seed gourdcarcpiB0934
CSPI02G00650Cucumber (Chinese Long) v3cpicucB075