CSPI01G30600 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G30600
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGamma-tubulin complex component
LocationChr1 : 25097798 .. 25101074 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCCGAAACCACCTTTTTCACTGTGTCTACCCTTTCGAGACCTCCCTCTTTTTCCTTCTGCTTTGGCCAATGCAGCCTCTCAGGCGAGACTAAACCCCTACTGCAGCCAACGACGACCAAAGAAAGACCCTTACAGCTCCTCTTCCGGTGCGGACCGGCTGTGTCAACCCGATCTGCACTCTACTTTTGTTTCTTCATCCAGCAACAACATTATACGACGCCTCTTTTGGTGAACAACCGCCACCAGCTTTGTTTTCTTTTATTTCGACCATTTGGGCATGTTCCAGCAAGTGTTCAAGTCCATTTTGGTAAGCTTCATTGGATAAAAACACTCTTTCGAACTAGTTTAAGGTTCTCTATATTTGTCTAATGCTAATTCGGATTAATTTTGGAATTATTTGGACATTTAAGCACCCAAGTCCGTTAGGGTGTTGGACCTCTATTTAGACCCTTTTGAATTAACTTAGGGTGCTGTAAGTTAGTTTCAAAGTATTGGAGAGGTTGATGGCCTTGGGAAAAATCAGCTGGGGCCGACAGAGAGGTCGGTGGCCATGAATAAATCAATTAGGGGCGATAGAGACCGTCGGTGGTCGTGGATGAAGTCGATGTGGTCGACAGAGCGTTGATGGTTCAATGTCAGCATGAATTTTGGGTTCACTATTTGTTGTTTTAATGGCCTTATTTTTAGGGTTGTGTAACGTAATGACATCCTTTGAATTGTCTTCAGTACTTGTTTTTACTTTAAGTTTCTCAATGTTCTTTAATGGGATCTTAAATCAAGTTTTTAGTGTTGTTATAACAAATAGTTGTTCTTCCTACGTTCTCATCTATTTCAAAATGACATTAGCATGCATGTAGTAAAGGTCATAGTTAGTCAAGATTCAAAAAGTTGCGTCAAAACATCTCTCCTTCTCTTTATGATACTCTCTTCATTCTTGTTTGTTAGTTCAGTGGTTATCATAGAGTTCTGTAATTCCAAAGAGAGCAAAAATGTTACACGAACTTCTGCTTGCTCTACTGGGTTACACCGGCGATCTGATAATCGATGAAAGAGAGCACTACAATTCCCTAGGGTTAGATAACTTACTTGTTGATGCCCCCATTTCTGGCGAACCCACGTTCAAGCTCGCCTCTGATATTTCCTTTCTTGAACCGAGCGAAAGGTACTCCCACAAACCCACTTCAAATGGATTCTCTTATATACATTGTCGATGATTGTTTTCTATCTTTGGATTCAGGGATCTAATTCAGAGGATCATTGTGTTAGGATTTTACTACAGAGAGCTTGATCGTTTTGCTACAAAGTCTAGGAATTTGAGTTGGATTCGTTCAGGTAATGAGTCTTCTTTAGCCAATTCGACGGAGTCGTCTAAAGATAAAATCGAAAACCCTAGTGTGTACAGGAGGGCCATAGCTAATGGCATTGTAGAGATACTGTCTATTTATAGATCTGCTGTGCTTCATGTGGAGCAGAAACTGTTGTCTGAAACGGTGCCGATTTTGGCAATAGTCACCCAGGGCCTCGATAAGGTGGGTTCTGAGATGTTTAACCTTTTTTCTGTAGGTAATTCTGTTGTCTAAGCGTTTACTGTATTGATCAATGGGTTTCTTTACATTATGCTATAAATTTGACTTGTTTATTGATTGTATCGTAGTTCTTTGTTCTTTTTCCACCTCTGCACCAACTCATTCGTGAGATTGAGCGTGATGATATTCGAGGTGGCCAGCTACTTAATCTTCTACACAAACGTTGTCACTGTGGCGTGCCTGAATTGCAAACTTGCATTCAAAGGTATTCAAGTCATCTCTTTCTTGTACGGAAAAGAAAAAAAAATCTCATATGAAAAGTTTGATTCATCATACCAGTGATTTCTCTTTATGCATTTGTTAAGATGGTATCAGTTATACACTCTAGAAAGAATGAGCTTTCTATTAACAAAACATACTATGGTAGAAGTCATTGGAATCTAAGATCAATGAGTACCTTATACATTGAATGAGATAAAAATAAAATGAAAAAGTGACTAGGGAATTGAAAAGGAGAAGAAGCATAAGAAAGAAGGAATTCATTCTCTGAGGTCTTGCTATCCATATCCTATGTTCATTGTTGTATTTAATAGTGAAATTTTAGAAGTTCGTCCACGGCCTGGTATTTCAATTCATTAGGAGGGACCGGAGGGTGTTCACTGGTTGGAAATTGCTATGTTCATCACTAGCCTGAAAGAAATTGTATGAGCTAAATGTCCATCAATCCATATAGAACCTCTTAAATGAACATTTAAATTGTTTATTCTTCATTGTAGATCATGTGGCAGAATTACCTTGCTAGCGACGTTTTATTGGAAGTTCATGCTTAATTTATTTAAACATTATTTTGCTTTTCTTCCTATTTTGCCCTCTGCCAAAAGAATAGGCTCCTTTGGCATGGTCATCAGGTAATGTACAATCAACTAGCATCATGGATGGTTTATGGGCTTCTTCAAGATAAGCATGGAGAATTTTTCATCAGAAGGTAACGGCACTAAGAACTGTTATATCTTATTATAGCAAACATGGCCTAGATTGTGAATATATTGTCTCGGGCTCTCAGTTGATTATAGTTGAACACAATTTGCGTTCAAAGATCGCGTACAGTCTACATTGACAGATTATTTGGTGGAGGGCTGCCATAATTTCTTAATAAATATAGTGGACATTTGGTTAGGCCTTTGTAGACTATCTTGTTATGGTATCTAAGAATTGATGGTTTTATGGATGTATTTAGGATTTTGCTTGATGGATATATTCTGGTATTCACCAGTAATAGAAATCTTGTTCAGTGAAAAATCTATGCAGTTGATATGGAGGAATTTTCATATTCGAGAAATACGATCTTCTTATCTATTATAATTCTTTTATTGTCTTAGTAGAGTATAAAAGGTTCCAGGCAAGTTTAACGGAGAAGGCTTAGAAGGAGAAAGGAAACAATGAACCAGCTGTTTAGAGAATAAGTCACGGATGATCAATCTTGATTTAATTTTTCCTCTTTACATTCTTTGGTTGCATTTGATAACTTTTACAATCTAGAAATGCATGATTCATTTTGTGATCATCAAACTGCTCAGGCAAGATGACAGGGAGACTAATCAAGGCTCATCCGTACAAGATATGTCAGAGAAGTTAGGACGCTTGTCAACTGATGAATCTTTGACTGATTGGCACTTGGGATTTCACATTTATCTGGTACATTCATTGCCACGCCTTCTACCAATATTTACTGGTTTTTTTCCTGGTTAG

mRNA sequence

ATGTTACACGAACTTCTGCTTGCTCTACTGGGTTACACCGGCGATCTGATAATCGATGAAAGAGAGCACTACAATTCCCTAGGGTTAGATAACTTACTTGTTGATGCCCCCATTTCTGGCGAACCCACGTTCAAGCTCGCCTCTGATATTTCCTTTCTTGAACCGAGCGAAAGGGATCTAATTCAGAGGATCATTGTGTTAGGATTTTACTACAGAGAGCTTGATCGTTTTGCTACAAAGTCTAGGAATTTGAGTTGGATTCGTTCAGGTAATGAGTCTTCTTTAGCCAATTCGACGGAGTCGTCTAAAGATAAAATCGAAAACCCTAGTGTGTACAGGAGGGCCATAGCTAATGGCATTGTAGAGATACTGTCTATTTATAGATCTGCTGTGCTTCATGTGGAGCAGAAACTGTTGTCTGAAACGGTGCCGATTTTGGCAATAGTCACCCAGGGCCTCGATAAGTTCTTTGTTCTTTTTCCACCTCTGCACCAACTCATTCGTGAGATTGAGCGTGATGATATTCGAGGTGGCCAGCTACTTAATCTTCTACACAAACGTTGTCACTGTGGCGTGCCTGAATTGCAAACTTGCATTCAAAGGCTCCTTTGGCATGGTCATCAGGTAATGTACAATCAACTAGCATCATGGATGGTTTATGGGCTTCTTCAAGATAAGCATGGAGAATTTTTCATCAGAAGGCAAGATGACAGGGAGACTAATCAAGGCTCATCCGTACAAGATATGTCAGAGAAGTTAGGACGCTTGTCAACTGATGAATCTTTGACTGATTGGCACTTGGGATTTCACATTTATCTGGTACATTCATTGCCACGCCTTCTACCAATATTTACTGGTTTTTTTCCTGGTTAG

Coding sequence (CDS)

ATGTTACACGAACTTCTGCTTGCTCTACTGGGTTACACCGGCGATCTGATAATCGATGAAAGAGAGCACTACAATTCCCTAGGGTTAGATAACTTACTTGTTGATGCCCCCATTTCTGGCGAACCCACGTTCAAGCTCGCCTCTGATATTTCCTTTCTTGAACCGAGCGAAAGGGATCTAATTCAGAGGATCATTGTGTTAGGATTTTACTACAGAGAGCTTGATCGTTTTGCTACAAAGTCTAGGAATTTGAGTTGGATTCGTTCAGGTAATGAGTCTTCTTTAGCCAATTCGACGGAGTCGTCTAAAGATAAAATCGAAAACCCTAGTGTGTACAGGAGGGCCATAGCTAATGGCATTGTAGAGATACTGTCTATTTATAGATCTGCTGTGCTTCATGTGGAGCAGAAACTGTTGTCTGAAACGGTGCCGATTTTGGCAATAGTCACCCAGGGCCTCGATAAGTTCTTTGTTCTTTTTCCACCTCTGCACCAACTCATTCGTGAGATTGAGCGTGATGATATTCGAGGTGGCCAGCTACTTAATCTTCTACACAAACGTTGTCACTGTGGCGTGCCTGAATTGCAAACTTGCATTCAAAGGCTCCTTTGGCATGGTCATCAGGTAATGTACAATCAACTAGCATCATGGATGGTTTATGGGCTTCTTCAAGATAAGCATGGAGAATTTTTCATCAGAAGGCAAGATGACAGGGAGACTAATCAAGGCTCATCCGTACAAGATATGTCAGAGAAGTTAGGACGCTTGTCAACTGATGAATCTTTGACTGATTGGCACTTGGGATTTCACATTTATCTGGTACATTCATTGCCACGCCTTCTACCAATATTTACTGGTTTTTTTCCTGGTTAG
Homology
[Close]
BLAST of CSPI01G30600 vs. Swiss-Prot
Match: GACP4_ARATH (Gamma-tubulin complex component 4 OS=Arabidopsis thaliana GN=GCP4 PE=2 SV=2)

HSP 1 Score: 390.2 bits (1001), Expect = 2.0e-107
Identity = 204/289 (70.59%), Postives = 238/289 (82.35%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLG+TGDLI+DERE   +LGL     D+P+S E TFKLA DISF+EPSERDL
Sbjct: 1   MLHELLLALLGFTGDLIVDEREQRKTLGLA-FNSDSPLSDECTFKLAPDISFIEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNE-SSLANSTESSKD-KIENPSVYRRAIAN 120
           I+R+I LGFYYRELDRFA KSRNLSWIRS      L  + E SK  + + PSVYRRAIAN
Sbjct: 61  IERLIKLGFYYRELDRFAKKSRNLSWIRSVTSVHPLERADELSKQSREKKPSVYRRAIAN 120

Query: 121 GIVEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGG 180
           GI EILS+YRSAVLH+EQKLL+ET PILA VT+GL+KFFVLFPPL+++I EIERDDIRGG
Sbjct: 121 GIGEILSVYRSAVLHIEQKLLAETTPILATVTEGLNKFFVLFPPLYEVILEIERDDIRGG 180

Query: 181 QLLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDR 240
           QLLN+L+KRCHCGVPEL+TC+QRLLW+GHQVMYNQLA+WMVYG+LQD HGEFFI+RQDD 
Sbjct: 181 QLLNVLNKRCHCGVPELRTCLQRLLWNGHQVMYNQLAAWMVYGILQDPHGEFFIKRQDDG 240

Query: 241 ETNQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYLVHSLPRLLPIFTG 287
           + +  SS +++SEKL R S  E SLTDWH GFHI L   LP  +P+  G
Sbjct: 241 DLDHRSSQEEVSEKLARTSVHETSLTDWHSGFHISL-DMLPDYIPMRLG 287

[Close]
BLAST of CSPI01G30600 vs. Swiss-Prot
Match: GCP4_MEDTR (Gamma-tubulin complex component 4 homolog OS=Medicago truncatula GN=85P PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.9e-106
Identity = 195/284 (68.66%), Postives = 231/284 (81.34%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIID R++       NL  + PIS E TFKLA DISF++PS+R+L
Sbjct: 1   MLHELLLALLGYTGDLIIDRRDN-------NLSANTPISDECTFKLAPDISFIDPSDREL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           I+RII LGFYYREL+RF+ KSRNL+WIRS N + L N         E PSVYRRA+ANGI
Sbjct: 61  IERIITLGFYYRELERFSAKSRNLNWIRSENANPLENK--------EKPSVYRRALANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEIL++Y S++LH+EQ LLSET+PILA VTQGL+KFF L PPL++LI +IER DIRGG+L
Sbjct: 121 VEILAVYSSSILHIEQLLLSETMPILATVTQGLNKFFSLLPPLYELILKIERGDIRGGEL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHK+CHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYG+L+D+HGEFFI RQ+ R+ 
Sbjct: 181 LNLLHKKCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGILEDRHGEFFISRQEGRDV 240

Query: 241 NQGSSVQDMSEKLGRLST-DESLTDWHLGFHIYLVHSLPRLLPI 284
              SS Q++SEKL RLST D SL+DWH+GFHI L   LP  +P+
Sbjct: 241 ENSSSHQEISEKLSRLSTADASLSDWHMGFHISL-DMLPEYIPM 268

[Close]
BLAST of CSPI01G30600 vs. Swiss-Prot
Match: GCP4_HUMAN (Gamma-tubulin complex component 4 OS=Homo sapiens GN=TUBGCP4 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-22
Identity = 75/254 (29.53%), Postives = 124/254 (48.82%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           M+HELLLAL GY G +    +                 SG    +++ D  FL PSE  +
Sbjct: 1   MIHELLLALSGYPGSIFTWNKR----------------SG---LQVSQDFPFLHPSETSV 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           + R+  LG  Y     F  +                +   S + +     +Y RA   G+
Sbjct: 61  LNRLCRLGTDYIRFTEFIEQYTG--------HVQQQDHHPSQQGQGGLHGIYLRAFCTGL 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
             +L  YR A+L +EQ+ L +    ++ V   LD+F +LFP +  ++ +I+   I G Q+
Sbjct: 121 DSVLQPYRQALLDLEQEFLGDPHLSISHVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQI 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           L  ++K    G+P +++ ++++L   H VMY QL++WM++GLL D+H EFFI +Q     
Sbjct: 181 LETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI-KQGPSSG 226

Query: 241 NQGSSVQDMSEKLG 255
           N  +  ++  E LG
Sbjct: 241 NVSAQPEEDEEDLG 226

[Close]
BLAST of CSPI01G30600 vs. Swiss-Prot
Match: GCP4_MOUSE (Gamma-tubulin complex component 4 OS=Mus musculus GN=Tubgcp4 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 5.7e-22
Identity = 73/254 (28.74%), Postives = 126/254 (49.61%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           M+HELLLAL GY G +    +                 SG    +++ D  FL PSE  +
Sbjct: 1   MIHELLLALSGYPGSIFTWNKR----------------SG---LQVSQDFPFLHPSETSV 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           + R+  LG  Y     F      +       +    +  +  +  +    +Y RA   G+
Sbjct: 61  LNRLCRLGTDYIRFTEF------IEQYTGHVQQQDHHPPQQGQGGLHG--IYLRAFCTGL 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
             +L  YR A+L +EQ+ L++    ++ V   LD+F +LFP +  ++ +I+   I G Q+
Sbjct: 121 DSVLQPYRQALLDLEQEFLADPHLSISHVNYSLDQFQLLFPSVMVVVEQIKSQKIHGCQI 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           L  ++K    G+P +++ ++++L   H VMY QL++WM++GLL D+H EFFI +Q     
Sbjct: 181 LETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI-KQGPSSG 226

Query: 241 NQGSSVQDMSEKLG 255
              + +++  E LG
Sbjct: 241 TLSAQLEEDEEDLG 226

[Close]
BLAST of CSPI01G30600 vs. TrEMBL
Match: A0A0A0LZT6_CUCSA (Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_1G616270 PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 1.6e-151
Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSE VPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 274
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 273

[Close]
BLAST of CSPI01G30600 vs. TrEMBL
Match: A0A061DQM0_THECC (Gamma-tubulin complex component OS=Theobroma cacao GN=TCM_004669 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.2e-120
Identity = 220/284 (77.46%), Postives = 250/284 (88.03%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLAL+GYTGDLIIDEREH+ SLGL +L  DAPIS + +FKLASDISF++ SERDL
Sbjct: 1   MLHELLLALVGYTGDLIIDEREHHKSLGL-HLSPDAPISDQRSFKLASDISFIDSSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           I+R+I LGFYYRELDRFATKSRNLSWIRS + S L  +   SK K E PSVYRRAIANG+
Sbjct: 61  IERLITLGFYYRELDRFATKSRNLSWIRSADVSPLERAAGLSKPKTEKPSVYRRAIANGL 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILS+YRSAVL +EQKLLSET+PILA VTQGL+KFFV+ PPL++LI EIERDDIRGGQL
Sbjct: 121 VEILSVYRSAVLQIEQKLLSETMPILATVTQGLNKFFVILPPLYELILEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQ CIQRLLWHGHQV+YNQLASWMVYG+LQD+HGEFFIRRQ+DR+ 
Sbjct: 181 LNLLHKRCHCGVPELQACIQRLLWHGHQVLYNQLASWMVYGILQDQHGEFFIRRQEDRDV 240

Query: 241 NQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYLVHSLPRLLPI 284
           + GSS+ DMSEKL RLSTD+ SLTDWHLGFHI+L   LP  +P+
Sbjct: 241 DYGSSISDMSEKLARLSTDDSSLTDWHLGFHIFL-DMLPEYIPM 282

[Close]
BLAST of CSPI01G30600 vs. TrEMBL
Match: A0A061DQV8_THECC (Gamma-tubulin complex component OS=Theobroma cacao GN=TCM_004669 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.2e-120
Identity = 220/284 (77.46%), Postives = 250/284 (88.03%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLAL+GYTGDLIIDEREH+ SLGL +L  DAPIS + +FKLASDISF++ SERDL
Sbjct: 1   MLHELLLALVGYTGDLIIDEREHHKSLGL-HLSPDAPISDQRSFKLASDISFIDSSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           I+R+I LGFYYRELDRFATKSRNLSWIRS + S L  +   SK K E PSVYRRAIANG+
Sbjct: 61  IERLITLGFYYRELDRFATKSRNLSWIRSADVSPLERAAGLSKPKTEKPSVYRRAIANGL 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILS+YRSAVL +EQKLLSET+PILA VTQGL+KFFV+ PPL++LI EIERDDIRGGQL
Sbjct: 121 VEILSVYRSAVLQIEQKLLSETMPILATVTQGLNKFFVILPPLYELILEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQ CIQRLLWHGHQV+YNQLASWMVYG+LQD+HGEFFIRRQ+DR+ 
Sbjct: 181 LNLLHKRCHCGVPELQACIQRLLWHGHQVLYNQLASWMVYGILQDQHGEFFIRRQEDRDV 240

Query: 241 NQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYLVHSLPRLLPI 284
           + GSS+ DMSEKL RLSTD+ SLTDWHLGFHI+L   LP  +P+
Sbjct: 241 DYGSSISDMSEKLARLSTDDSSLTDWHLGFHIFL-DMLPEYIPM 282

[Close]
BLAST of CSPI01G30600 vs. TrEMBL
Match: W9QMJ5_9ROSA (Gamma-tubulin complex component OS=Morus notabilis GN=L484_011092 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 7.1e-120
Identity = 223/275 (81.09%), Postives = 245/275 (89.09%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHE+LLALLGYTGDLIIDER+H NSLG+  L  DAPI+ EPTFKLA DISFL+PSERDL
Sbjct: 1   MLHEVLLALLGYTGDLIIDERDHRNSLGIA-LSPDAPIADEPTFKLAPDISFLQPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKI-ENPSVYRRAIANG 120
           I+RI+ LGFYYRELDRFATKSRNLSWIRS N S LA  +E SK K  +  SVYRRAIANG
Sbjct: 61  IERIVTLGFYYRELDRFATKSRNLSWIRSENASPLATISELSKGKTGKKQSVYRRAIANG 120

Query: 121 IVEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQ 180
           IVEILS+YRSAVLH+EQKLLSETVPILA VTQGL+KFFVL PPL++L+ EIER+DIRGGQ
Sbjct: 121 IVEILSVYRSAVLHIEQKLLSETVPILATVTQGLNKFFVLLPPLYELVLEIERNDIRGGQ 180

Query: 181 LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRE 240
           LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYG LQD++GEFFIRRQ+DR+
Sbjct: 181 LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGTLQDQYGEFFIRRQEDRD 240

Query: 241 TNQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
              GSS  D+SEKL RLSTD+ SLTDWHLGFHIYL
Sbjct: 241 VEHGSSHSDISEKLARLSTDDTSLTDWHLGFHIYL 274

[Close]
BLAST of CSPI01G30600 vs. TrEMBL
Match: M5VMI9_PRUPE (Gamma-tubulin complex component OS=Prunus persica GN=PRUPE_ppa001912mg PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 9.3e-120
Identity = 219/274 (79.93%), Postives = 244/274 (89.05%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREH  SLG     VDAPIS EPTFKLA DISF++PSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHSKSLG-----VDAPISDEPTFKLAPDISFIQPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           I++I  LGFYYRELDRF+ +SRNLSWIRS N SSLA+  + SK K E PSVYRRAIANGI
Sbjct: 61  IEKITTLGFYYRELDRFSVRSRNLSWIRSANASSLAS--DLSKPKAEKPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILS+YRSAVLH+EQKLLSETVPILA VTQGL+KFFVL PPL++L+ EIERDDIRGGQL
Sbjct: 121 VEILSVYRSAVLHIEQKLLSETVPILATVTQGLNKFFVLLPPLYELVLEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWH HQV+YNQLA+WMVYG+LQD+HGEFFIRRQ+D++ 
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHAHQVLYNQLAAWMVYGILQDQHGEFFIRRQEDKDV 240

Query: 241 NQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
             GSS +D+SEKL R+STD+ SLTDWHLGFHIYL
Sbjct: 241 EHGSSHRDISEKLARMSTDDTSLTDWHLGFHIYL 267

[Close]
BLAST of CSPI01G30600 vs. TAIR10
Match: AT3G53760.1 (AT3G53760.1 GAMMA-TUBULIN COMPLEX PROTEIN 4)

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-108
Identity = 204/289 (70.59%), Postives = 238/289 (82.35%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLG+TGDLI+DERE   +LGL     D+P+S E TFKLA DISF+EPSERDL
Sbjct: 1   MLHELLLALLGFTGDLIVDEREQRKTLGLA-FNSDSPLSDECTFKLAPDISFIEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNE-SSLANSTESSKD-KIENPSVYRRAIAN 120
           I+R+I LGFYYRELDRFA KSRNLSWIRS      L  + E SK  + + PSVYRRAIAN
Sbjct: 61  IERLIKLGFYYRELDRFAKKSRNLSWIRSVTSVHPLERADELSKQSREKKPSVYRRAIAN 120

Query: 121 GIVEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGG 180
           GI EILS+YRSAVLH+EQKLL+ET PILA VT+GL+KFFVLFPPL+++I EIERDDIRGG
Sbjct: 121 GIGEILSVYRSAVLHIEQKLLAETTPILATVTEGLNKFFVLFPPLYEVILEIERDDIRGG 180

Query: 181 QLLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDR 240
           QLLN+L+KRCHCGVPEL+TC+QRLLW+GHQVMYNQLA+WMVYG+LQD HGEFFI+RQDD 
Sbjct: 181 QLLNVLNKRCHCGVPELRTCLQRLLWNGHQVMYNQLAAWMVYGILQDPHGEFFIKRQDDG 240

Query: 241 ETNQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYLVHSLPRLLPIFTG 287
           + +  SS +++SEKL R S  E SLTDWH GFHI L   LP  +P+  G
Sbjct: 241 DLDHRSSQEEVSEKLARTSVHETSLTDWHSGFHISL-DMLPDYIPMRLG 287

[Close]
BLAST of CSPI01G30600 vs. NCBI nr
Match: gi|778663742|ref|XP_011660150.1| (PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis sativus])

HSP 1 Score: 543.5 bits (1399), Expect = 2.2e-151
Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSE VPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 274
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 273

[Close]
BLAST of CSPI01G30600 vs. NCBI nr
Match: gi|700211413|gb|KGN66509.1| (hypothetical protein Csa_1G616270 [Cucumis sativus])

HSP 1 Score: 543.5 bits (1399), Expect = 2.2e-151
Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSE VPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 274
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 273

[Close]
BLAST of CSPI01G30600 vs. NCBI nr
Match: gi|659130829|ref|XP_008465374.1| (PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis melo])

HSP 1 Score: 542.3 bits (1396), Expect = 5.0e-151
Identity = 271/273 (99.27%), Postives = 273/273 (100.00%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGL+NLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLNNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDI+GGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIQGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 274
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 273

[Close]
BLAST of CSPI01G30600 vs. NCBI nr
Match: gi|659099008|ref|XP_008450387.1| (PREDICTED: gamma-tubulin complex component 4 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 537.3 bits (1383), Expect = 1.6e-149
Identity = 270/273 (98.90%), Postives = 271/273 (99.27%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGL+NLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLNNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLA STESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLAISTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLI EIERDDIRGGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLICEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 274
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 273

[Close]
BLAST of CSPI01G30600 vs. NCBI nr
Match: gi|590719039|ref|XP_007050947.1| (Tubulin gamma complex-associated protein isoform 1 [Theobroma cacao])

HSP 1 Score: 439.5 bits (1129), Expect = 4.6e-120
Identity = 220/284 (77.46%), Postives = 250/284 (88.03%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLAL+GYTGDLIIDEREH+ SLGL +L  DAPIS + +FKLASDISF++ SERDL
Sbjct: 1   MLHELLLALVGYTGDLIIDEREHHKSLGL-HLSPDAPISDQRSFKLASDISFIDSSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           I+R+I LGFYYRELDRFATKSRNLSWIRS + S L  +   SK K E PSVYRRAIANG+
Sbjct: 61  IERLITLGFYYRELDRFATKSRNLSWIRSADVSPLERAAGLSKPKTEKPSVYRRAIANGL 120

Query: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILS+YRSAVL +EQKLLSET+PILA VTQGL+KFFV+ PPL++LI EIERDDIRGGQL
Sbjct: 121 VEILSVYRSAVLQIEQKLLSETMPILATVTQGLNKFFVILPPLYELILEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQ CIQRLLWHGHQV+YNQLASWMVYG+LQD+HGEFFIRRQ+DR+ 
Sbjct: 181 LNLLHKRCHCGVPELQACIQRLLWHGHQVLYNQLASWMVYGILQDQHGEFFIRRQEDRDV 240

Query: 241 NQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYLVHSLPRLLPI 284
           + GSS+ DMSEKL RLSTD+ SLTDWHLGFHI+L   LP  +P+
Sbjct: 241 DYGSSISDMSEKLARLSTDDSSLTDWHLGFHIFL-DMLPEYIPM 282

The following BLAST results are available for this feature:
BLAST of CSPI01G30600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GACP4_ARATH2.0e-10770.59Gamma-tubulin complex component 4 OS=Arabidopsis thaliana GN=GCP4 PE=2 SV=2[more]
GCP4_MEDTR4.9e-10668.66Gamma-tubulin complex component 4 homolog OS=Medicago truncatula GN=85P PE=2 SV=... [more]
GCP4_HUMAN2.6e-2229.53Gamma-tubulin complex component 4 OS=Homo sapiens GN=TUBGCP4 PE=1 SV=1[more]
GCP4_MOUSE5.7e-2228.74Gamma-tubulin complex component 4 OS=Mus musculus GN=Tubgcp4 PE=1 SV=2[more]
BLAST of CSPI01G30600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZT6_CUCSA1.6e-15199.63Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_1G616270 PE=3 SV=1[more]
A0A061DQM0_THECC3.2e-12077.46Gamma-tubulin complex component OS=Theobroma cacao GN=TCM_004669 PE=3 SV=1[more]
A0A061DQV8_THECC3.2e-12077.46Gamma-tubulin complex component OS=Theobroma cacao GN=TCM_004669 PE=3 SV=1[more]
W9QMJ5_9ROSA7.1e-12081.09Gamma-tubulin complex component OS=Morus notabilis GN=L484_011092 PE=3 SV=1[more]
M5VMI9_PRUPE9.3e-12079.93Gamma-tubulin complex component OS=Prunus persica GN=PRUPE_ppa001912mg PE=3 SV=1[more]
BLAST of CSPI01G30600 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G53760.11.1e-10870.59 GAMMA-TUBULIN COMPLEX PROTEIN 4[more]
BLAST of CSPI01G30600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778663742|ref|XP_011660150.1|2.2e-15199.63PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis sativus][more]
gi|700211413|gb|KGN66509.1|2.2e-15199.63hypothetical protein Csa_1G616270 [Cucumis sativus][more]
gi|659130829|ref|XP_008465374.1|5.0e-15199.27PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis melo][more]
gi|659099008|ref|XP_008450387.1|1.6e-14998.90PREDICTED: gamma-tubulin complex component 4 homolog isoform X1 [Cucumis melo][more]
gi|590719039|ref|XP_007050947.1|4.6e-12077.46Tubulin gamma complex-associated protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007259GCP
IPR007259GCP
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
GO:0007020microtubule nucleation
GO:0000226microtubule cytoskeleton organization
GO:0007020microtubule nucleation
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
GO:0000922spindle pole
GO:0005815microtubule organizing center
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
GO:0043015gamma-tubulin binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043622 cortical microtubule organization
biological_process GO:0040007 growth
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009624 response to nematode
biological_process GO:0000226 microtubule cytoskeleton organization
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000922 spindle pole
cellular_component GO:0045298 tubulin complex
molecular_function GO:0043015 gamma-tubulin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G30600.2CSPI01G30600.2mRNA
CSPI01G30600.1CSPI01G30600.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 108..284
score: 1.4E-80coord: 40..92
score: 1.4E-80coord: 1..22
score: 1.4
IPR007259Gamma-tubulin complex component proteinPFAMPF04130Spc97_Spc98coord: 4..271
score: 2.3
NoneNo IPR availablePANTHERPTHR19302:SF27GAMMA-TUBULIN COMPLEX COMPONENT 4coord: 1..22
score: 1.4E-80coord: 40..92
score: 1.4E-80coord: 108..284
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G30600Csa1G616270Cucumber (Chinese Long) v2cpicuB001
CSPI01G30600MELO3C015161Melon (DHL92) v3.5.1cpimeB042
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G30600Silver-seed gourdcarcpiB0462
CSPI01G30600Silver-seed gourdcarcpiB0506
CSPI01G30600Silver-seed gourdcarcpiB0558
CSPI01G30600Cucumber (Chinese Long) v3cpicucB000
CSPI01G30600Cucumber (Chinese Long) v3cpicucB056
CSPI01G30600Watermelon (97103) v2cpiwmbB028
CSPI01G30600Watermelon (97103) v2cpiwmbB043
CSPI01G30600Wax gourdcpiwgoB021
CSPI01G30600Wax gourdcpiwgoB100
CSPI01G30600Wild cucumber (PI 183967)cpicpiB045
CSPI01G30600Cucumber (Gy14) v1cgycpiB041
CSPI01G30600Cucumber (Gy14) v1cgycpiB166
CSPI01G30600Cucurbita maxima (Rimu)cmacpiB084
CSPI01G30600Cucurbita maxima (Rimu)cmacpiB058
CSPI01G30600Cucurbita maxima (Rimu)cmacpiB543
CSPI01G30600Cucurbita moschata (Rifu)cmocpiB050
CSPI01G30600Cucurbita moschata (Rifu)cmocpiB078
CSPI01G30600Cucurbita moschata (Rifu)cmocpiB534
CSPI01G30600Melon (DHL92) v3.5.1cpimeB071
CSPI01G30600Watermelon (Charleston Gray)cpiwcgB037
CSPI01G30600Watermelon (Charleston Gray)cpiwcgB049
CSPI01G30600Watermelon (97103) v1cpiwmB022
CSPI01G30600Watermelon (97103) v1cpiwmB076
CSPI01G30600Cucurbita pepo (Zucchini)cpecpiB268
CSPI01G30600Cucurbita pepo (Zucchini)cpecpiB350
CSPI01G30600Cucurbita pepo (Zucchini)cpecpiB655
CSPI01G30600Bottle gourd (USVL1VR-Ls)cpilsiB003
CSPI01G30600Bottle gourd (USVL1VR-Ls)cpilsiB059
CSPI01G30600Melon (DHL92) v3.6.1cpimedB036
CSPI01G30600Melon (DHL92) v3.6.1cpimedB064
CSPI01G30600Cucumber (Gy14) v2cgybcpiB002
CSPI01G30600Cucumber (Gy14) v2cgybcpiB251