Csa1G616270 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G616270
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGamma-tubulin complex component, putative; contains IPR007259 (Spc97/Spc98)
LocationChr1 : 24390316 .. 24393255 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACACGAACTTCTGCTTGCTCTACTGGGTTACACCGGCGATCTGATAATCGATGAAAGAGAGCACTACAATTCCCTAGGGTTAGATAACTTACTTGTTGATGCCCCCATTTCTGGTGAACCCACGTTCAAGCTCGCCTCTGATATTTCCTTTCTTGAACCGAGCGAAAGGTACTCCCACAAACCCACTTCAAATGGATTCTCTTATATACATTATCGATGATTGTTTTCTATCTTTGGATTCAGGGATCTAATTCAGAGGATCATTGTGTTAGGATTTTACTACAGAGAGCTTGATCGTTTTGCTACAAAGTCTAGGAATTTGAGTTGGATTCGTTCAGGTAATGAGTCTTCTTTAGCCAATTCGACGGAGTCGTCTAAAGATAAAATCGAAAACCCTAGTGTGTACAGGAGGGCCATAGCTAATGGCATTGTAGAGATACTGTCTATTTATAGATCTGCTGTGCTTCATGTGGAGCAGAAACTGTTGTCTGAAATGGTGCCGATTTTGGCAATAGTCACCCAGGGCCTCGATAAGGTGGGTTCTGAGATGTTTAACCTTTTTTCTGTAGGTAATTCTGTTGTCTAAGCGTTTACTGTATTGATCAATGGGTTTCTTTACATTATGCTATAAATTTGACTTGTTTATTGATTGTATCGTAGTTCTTTGTTCTTTTTCCACCTCTGCACCAACTCATTCGTGAGATTGAGCGTGATGATATTCGAGGTGGCCAGCTACTTAATCTTCTACACAAACGTTGTCACTGTGGCGTGCCTGAATTGCAAACTTGCATTCAAAGGTATTCAAGTCAGCTCTTTCTTGTACGGAAAAAAAAAAAATGTCATATGAAAAGTTTGATTCATCATACCAGTGATTTCTCTTTATGCATTTGTTAAGATGGTATCAGTTATACACTCTAGAAAGAATGAGCTTTCTATTAACAAAACATACTATGGTAGAAGTCATTGGAATCTAAGATCAATGAGTACCTTATACATTGAATGAGATAAAAATAAAATGAAAAAGTGACTAGGGAATTGAAAAGGAGAAGAAGCATAAGAAAGAAGGAATTCATTCTCTGAGGTCTTGCTATCCATATCCTATGTTCATTGTTGTATTTAATAGTGAAATTTTAGAAGTTCGTCCACGACCTGGTATTTCAATTCATTAGGAGGGACCGGAGGGTGTTCACTGGTTGGAAATTGCTATGTTCATCACTAGCCTGAAAGAAATTGTATGAGCTAAATGTCCATCAATCCATATAGCAACTCTTAAATGAACATTTAAATTGTTTATTCTTCATTGTAGATCATGTGGCAGAATTACCTTGCTAGCGACGTTTTATTGGAAGTTCATGCTTAATTTATTTAAACATTATTTTGCTTTTCTTCCTATTTTGCCCTCTGCCAAAAGAATAGGCTCCTTTGGCACGGTCATCAGGTAATGTACAATCAACTAGCATCATGGATGGTTTATGGGCTTCTTCAAGATAAGCATGGAGAATTTTTCATCAGAAGGTAACGGCACTAAGAACTGTTATATCTTATTATAGCAAACATGGCTTAGATTGTGAATATATTGTCTCGGGCTCTCAGTTGATTTTAGTTGAACACAATTTGCGTTCAAAGATCGCGTACAGTCTACATCGACAGATTATTTGGTGGAGGGCTGCCATAATTTCTTAATAAATATAGTGGACATTTGGTTAGGCCTTTGTAGACTATCTTGTTATGGTATCTAAGAATTGATGGTTTTATGGATGTATTTAGGATTTTGCTTGATGGATATATTCTGGTATTCACCAGTAATAGAAATCTTGTTCAGTGAAAAATCTATGCAGTTGATATGGAGGAATTTTCATATTCGAGAAATACGATCTTCTTATCTATTATAATTCTTTTATTGTCTTAGTAGAGTATAAAATGTTCCAGGCAAGTTTAACGGAGAAGGCCTAGAAGGAGAAAGGAAACAATGAACCAGCTGTTTAGAGAATAAGTCACGGATGATCAATCTTGATTTAATTTTTCCTCTTTACATTCTTTGGTTGCATTTGATAACTTTTACAATCTAGAAATGCATGAGTCATTTTGTGATCATCAAACTGCTCAGGCAAGATGACAGGGAGACTAATCAAGGCTCATCTGTACAAGATATGTCAGAGAAGTTAGGACGCTTGTCAACTGATGAATCTTTGACTGATTGGCACTTGGGATTTCACATTTATCTGGTACATTCATTGCCACGCCTTCTACCAATATTTACTGGTTTTTTTTCCTGGTTAGTTTTTGTTTCTGACAATTACTGCTTTTAGTTCGTGTGGTAACTTAAATTTGACATGCTTTTTTATGACAGTTATTTTTAATGGGTCCATATTGACTGATTTTTTCATCTCCATTTTTCTTGTGATAGCCAAGTGTTGTTACTTCTCTCTTTTGCGAATTTCATTTTATGCTTTAAACCACATTGTCACATATTTCTTCAATGATTGCTTATTTTTTTGTCATTTTTCTTTTATTATCACCAAGTATTCAGGTCATCTTGGATGCATGTAGACCAGTAACCATGTAACTTGTTTTTTTGATAAGGAAACGAGCATCTTTATTAATGTAATGAAATGAGACTAATGCTCAAAGTCTATAAATATACAAAGAGTTTAGAATTTCTAAGGGACAAAGAAACCGGAAACCAAATACACAGGCAAACAAAACGAGGCACAAGAGCTTAATAAACTCCAAACAAGGCTGAAAAACAACCAAAACAGCAGCTGAAAGAAACCAATACAATTGAGATGTTGGGAAGGGAAAACAAAAGTGTGCCAAAAAAACCATAACCATGAAAGAAGAATTCTTTGAGAAGCTTGAAGAAGATGCATCTCAAGAGGATGAAACGAATAAGCAGAACTATCTTGATTCCAACCAAAAAACATCGGATTCCTAA

mRNA sequence

ATGTTACACGAACTTCTGCTTGCTCTACTGGGTTACACCGGCGATCTGATAATCGATGAAAGAGAGCACTACAATTCCCTAGGGTTAGATAACTTACTTGTTGATGCCCCCATTTCTGGTGAACCCACGTTCAAGCTCGCCTCTGATATTTCCTTTCTTGAACCGAGCGAAAGGGATCTAATTCAGAGGATCATTGTGTTAGGATTTTACTACAGAGAGCTTGATCGTTTTGCTACAAAGTCTAGGAATTTGAGTTGGATTCGTTCAGGTAATGAGTCTTCTTTAGCCAATTCGACGGAGTCGTCTAAAGATAAAATCGAAAACCCTAGTGTGTACAGGAGGGCCATAGCTAATGGCATTGTAGAGATACTGTCTATTTATAGATCTGCTGTGCTTCATGTGGAGCAGAAACTGTTGTCTGAAATGGTGCCGATTTTGGCAATAGTCACCCAGGGCCTCGATAAGTTCTTTGTTCTTTTTCCACCTCTGCACCAACTCATTCGTGAGATTGAGCGTGATGATATTCGAGGTGGCCAGCTACTTAATCTTCTACACAAACGTTGTCACTGTGGCGTGCCTGAATTGCAAACTTGCATTCAAAGGCTCCTTTGGCACGGTCATCAGGTAATGTACAATCAACTAGCATCATGGATGGTTTATGGGCTTCTTCAAGATAAGCATGGAGAATTTTTCATCAGAAGGCAAGATGACAGGGAGACTAATCAAGGCTCATCTGTACAAGATATGTCAGAGAAGTTAGGACGCTTGTCAACTGATGAATCTTTGACTGATTGGCACTTGGGATTTCACATTTATCTGGGAAAACAAAAGTGTGCCAAAAAAACCATAACCATGAAAGAAGAATTCTTTGAGAAGCTTGAAGAAGATGCATCTCAAGAGGATGAAACGAATAAGCAGAACTATCTTGATTCCAACCAAAAAACATCGGATTCCTAA

Coding sequence (CDS)

ATGTTACACGAACTTCTGCTTGCTCTACTGGGTTACACCGGCGATCTGATAATCGATGAAAGAGAGCACTACAATTCCCTAGGGTTAGATAACTTACTTGTTGATGCCCCCATTTCTGGTGAACCCACGTTCAAGCTCGCCTCTGATATTTCCTTTCTTGAACCGAGCGAAAGGGATCTAATTCAGAGGATCATTGTGTTAGGATTTTACTACAGAGAGCTTGATCGTTTTGCTACAAAGTCTAGGAATTTGAGTTGGATTCGTTCAGGTAATGAGTCTTCTTTAGCCAATTCGACGGAGTCGTCTAAAGATAAAATCGAAAACCCTAGTGTGTACAGGAGGGCCATAGCTAATGGCATTGTAGAGATACTGTCTATTTATAGATCTGCTGTGCTTCATGTGGAGCAGAAACTGTTGTCTGAAATGGTGCCGATTTTGGCAATAGTCACCCAGGGCCTCGATAAGTTCTTTGTTCTTTTTCCACCTCTGCACCAACTCATTCGTGAGATTGAGCGTGATGATATTCGAGGTGGCCAGCTACTTAATCTTCTACACAAACGTTGTCACTGTGGCGTGCCTGAATTGCAAACTTGCATTCAAAGGCTCCTTTGGCACGGTCATCAGGTAATGTACAATCAACTAGCATCATGGATGGTTTATGGGCTTCTTCAAGATAAGCATGGAGAATTTTTCATCAGAAGGCAAGATGACAGGGAGACTAATCAAGGCTCATCTGTACAAGATATGTCAGAGAAGTTAGGACGCTTGTCAACTGATGAATCTTTGACTGATTGGCACTTGGGATTTCACATTTATCTGGGAAAACAAAAGTGTGCCAAAAAAACCATAACCATGAAAGAAGAATTCTTTGAGAAGCTTGAAGAAGATGCATCTCAAGAGGATGAAACGAATAAGCAGAACTATCTTGATTCCAACCAAAAAACATCGGATTCCTAA

Protein sequence

MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDLIQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGIVEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQLLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRETNQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYLGKQKCAKKTITMKEEFFEKLEEDASQEDETNKQNYLDSNQKTSDS*
Homology
[Close]
BLAST of Csa1G616270 vs. Swiss-Prot
Match: GACP4_ARATH (Gamma-tubulin complex component 4 OS=Arabidopsis thaliana GN=GCP4 PE=2 SV=2)

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-106
Identity = 199/276 (72.10%), Postives = 230/276 (83.33%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLG+TGDLI+DERE   +LGL     D+P+S E TFKLA DISF+EPSERDL
Sbjct: 1   MLHELLLALLGFTGDLIVDEREQRKTLGLA-FNSDSPLSDECTFKLAPDISFIEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNE-SSLANSTESSKD-KIENPSVYRRAIAN 120
           I+R+I LGFYYRELDRFA KSRNLSWIRS      L  + E SK  + + PSVYRRAIAN
Sbjct: 61  IERLIKLGFYYRELDRFAKKSRNLSWIRSVTSVHPLERADELSKQSREKKPSVYRRAIAN 120

Query: 121 GIVEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGG 180
           GI EILS+YRSAVLH+EQKLL+E  PILA VT+GL+KFFVLFPPL+++I EIERDDIRGG
Sbjct: 121 GIGEILSVYRSAVLHIEQKLLAETTPILATVTEGLNKFFVLFPPLYEVILEIERDDIRGG 180

Query: 181 QLLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDR 240
           QLLN+L+KRCHCGVPEL+TC+QRLLW+GHQVMYNQLA+WMVYG+LQD HGEFFI+RQDD 
Sbjct: 181 QLLNVLNKRCHCGVPELRTCLQRLLWNGHQVMYNQLAAWMVYGILQDPHGEFFIKRQDDG 240

Query: 241 ETNQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
           + +  SS +++SEKL R S  E SLTDWH GFHI L
Sbjct: 241 DLDHRSSQEEVSEKLARTSVHETSLTDWHSGFHISL 275

[Close]
BLAST of Csa1G616270 vs. Swiss-Prot
Match: GCP4_MEDTR (Gamma-tubulin complex component 4 homolog OS=Medicago truncatula GN=85P PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 3.5e-105
Identity = 191/274 (69.71%), Postives = 224/274 (81.75%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIID R++       NL  + PIS E TFKLA DISF++PS+R+L
Sbjct: 1   MLHELLLALLGYTGDLIIDRRDN-------NLSANTPISDECTFKLAPDISFIDPSDREL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           I+RII LGFYYREL+RF+ KSRNL+WIRS N + L N         E PSVYRRA+ANGI
Sbjct: 61  IERIITLGFYYRELERFSAKSRNLNWIRSENANPLENK--------EKPSVYRRALANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEIL++Y S++LH+EQ LLSE +PILA VTQGL+KFF L PPL++LI +IER DIRGG+L
Sbjct: 121 VEILAVYSSSILHIEQLLLSETMPILATVTQGLNKFFSLLPPLYELILKIERGDIRGGEL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHK+CHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYG+L+D+HGEFFI RQ+ R+ 
Sbjct: 181 LNLLHKKCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGILEDRHGEFFISRQEGRDV 240

Query: 241 NQGSSVQDMSEKLGRLST-DESLTDWHLGFHIYL 274
              SS Q++SEKL RLST D SL+DWH+GFHI L
Sbjct: 241 ENSSSHQEISEKLSRLSTADASLSDWHMGFHISL 259

[Close]
BLAST of Csa1G616270 vs. Swiss-Prot
Match: GCP4_HUMAN (Gamma-tubulin complex component 4 OS=Homo sapiens GN=TUBGCP4 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.4e-23
Identity = 75/254 (29.53%), Postives = 122/254 (48.03%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           M+HELLLAL GY G +    +                 SG    +++ D  FL PSE  +
Sbjct: 1   MIHELLLALSGYPGSIFTWNKR----------------SG---LQVSQDFPFLHPSETSV 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           + R+  LG  Y     F  +                +   S + +     +Y RA   G+
Sbjct: 61  LNRLCRLGTDYIRFTEFIEQYTG--------HVQQQDHHPSQQGQGGLHGIYLRAFCTGL 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
             +L  YR A+L +EQ+ L +    ++ V   LD+F +LFP +  ++ +I+   I G Q+
Sbjct: 121 DSVLQPYRQALLDLEQEFLGDPHLSISHVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQI 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           L  ++K    G+P +++ ++++L   H VMY QL++WM++GLL D+H EFFI +Q     
Sbjct: 181 LETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI-KQGPSSG 226

Query: 241 NQGSSVQDMSEKLG 255
           N  +  ++  E LG
Sbjct: 241 NVSAQPEEDEEDLG 226

[Close]
BLAST of Csa1G616270 vs. Swiss-Prot
Match: GCP4_MOUSE (Gamma-tubulin complex component 4 OS=Mus musculus GN=Tubgcp4 PE=1 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 7.4e-23
Identity = 73/254 (28.74%), Postives = 124/254 (48.82%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           M+HELLLAL GY G +    +                 SG    +++ D  FL PSE  +
Sbjct: 1   MIHELLLALSGYPGSIFTWNKR----------------SG---LQVSQDFPFLHPSETSV 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           + R+  LG  Y     F      +       +    +  +  +  +    +Y RA   G+
Sbjct: 61  LNRLCRLGTDYIRFTEF------IEQYTGHVQQQDHHPPQQGQGGLHG--IYLRAFCTGL 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
             +L  YR A+L +EQ+ L++    ++ V   LD+F +LFP +  ++ +I+   I G Q+
Sbjct: 121 DSVLQPYRQALLDLEQEFLADPHLSISHVNYSLDQFQLLFPSVMVVVEQIKSQKIHGCQI 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           L  ++K    G+P +++ ++++L   H VMY QL++WM++GLL D+H EFFI +Q     
Sbjct: 181 LETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI-KQGPSSG 226

Query: 241 NQGSSVQDMSEKLG 255
              + +++  E LG
Sbjct: 241 TLSAQLEEDEEDLG 226

[Close]
BLAST of Csa1G616270 vs. TrEMBL
Match: A0A0A0LZT6_CUCSA (Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_1G616270 PE=3 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 5.1e-180
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYLGKQKCAKKTITMKEEFFEKLEEDASQE 300
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYLGKQKCAKKTITMKEEFFEKLEEDASQE
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYLGKQKCAKKTITMKEEFFEKLEEDASQE 300

Query: 301 DETNKQNYLDSNQKTSDS 319
           DETNKQNYLDSNQKTSDS
Sbjct: 301 DETNKQNYLDSNQKTSDS 318

[Close]
BLAST of Csa1G616270 vs. TrEMBL
Match: W9QMJ5_9ROSA (Gamma-tubulin complex component OS=Morus notabilis GN=L484_011092 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 4.6e-120
Identity = 222/275 (80.73%), Postives = 244/275 (88.73%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHE+LLALLGYTGDLIIDER+H NSLG+  L  DAPI+ EPTFKLA DISFL+PSERDL
Sbjct: 1   MLHEVLLALLGYTGDLIIDERDHRNSLGIA-LSPDAPIADEPTFKLAPDISFLQPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKI-ENPSVYRRAIANG 120
           I+RI+ LGFYYRELDRFATKSRNLSWIRS N S LA  +E SK K  +  SVYRRAIANG
Sbjct: 61  IERIVTLGFYYRELDRFATKSRNLSWIRSENASPLATISELSKGKTGKKQSVYRRAIANG 120

Query: 121 IVEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQ 180
           IVEILS+YRSAVLH+EQKLLSE VPILA VTQGL+KFFVL PPL++L+ EIER+DIRGGQ
Sbjct: 121 IVEILSVYRSAVLHIEQKLLSETVPILATVTQGLNKFFVLLPPLYELVLEIERNDIRGGQ 180

Query: 181 LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRE 240
           LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYG LQD++GEFFIRRQ+DR+
Sbjct: 181 LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGTLQDQYGEFFIRRQEDRD 240

Query: 241 TNQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
              GSS  D+SEKL RLSTD+ SLTDWHLGFHIYL
Sbjct: 241 VEHGSSHSDISEKLARLSTDDTSLTDWHLGFHIYL 274

[Close]
BLAST of Csa1G616270 vs. TrEMBL
Match: M5VMI9_PRUPE (Gamma-tubulin complex component OS=Prunus persica GN=PRUPE_ppa001912mg PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 7.8e-120
Identity = 218/274 (79.56%), Postives = 243/274 (88.69%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREH  SLG     VDAPIS EPTFKLA DISF++PSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHSKSLG-----VDAPISDEPTFKLAPDISFIQPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           I++I  LGFYYRELDRF+ +SRNLSWIRS N SSLA+  + SK K E PSVYRRAIANGI
Sbjct: 61  IEKITTLGFYYRELDRFSVRSRNLSWIRSANASSLAS--DLSKPKAEKPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILS+YRSAVLH+EQKLLSE VPILA VTQGL+KFFVL PPL++L+ EIERDDIRGGQL
Sbjct: 121 VEILSVYRSAVLHIEQKLLSETVPILATVTQGLNKFFVLLPPLYELVLEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWH HQV+YNQLA+WMVYG+LQD+HGEFFIRRQ+D++ 
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHAHQVLYNQLAAWMVYGILQDQHGEFFIRRQEDKDV 240

Query: 241 NQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
             GSS +D+SEKL R+STD+ SLTDWHLGFHIYL
Sbjct: 241 EHGSSHRDISEKLARMSTDDTSLTDWHLGFHIYL 267

[Close]
BLAST of Csa1G616270 vs. TrEMBL
Match: A0A067JWA3_JATCU (Gamma-tubulin complex component OS=Jatropha curcas GN=JCGZ_13943 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-119
Identity = 220/274 (80.29%), Postives = 240/274 (87.59%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREH  S+G+  L  DA IS E  FKLA DISF+EPS+RDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHQKSIGV-RLSPDASISDERCFKLAPDISFIEPSDRDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRII LGFYYRELDRFATKSRNLSWIRS N S LA +TE S +  E PSVYRRAIANG+
Sbjct: 61  IQRIISLGFYYRELDRFATKSRNLSWIRSSNVSPLARATELSHNTTEKPSVYRRAIANGV 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILS+YRSAVLH+EQKLLSE VPILA +TQGL+KFFVL PPL++L+ EIERDDIRGGQL
Sbjct: 121 VEILSVYRSAVLHIEQKLLSETVPILATITQGLNKFFVLLPPLYELVLEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQV+YNQLASWM+YG+LQD+HGEFFIRRQ+DR+ 
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVLYNQLASWMIYGILQDQHGEFFIRRQEDRDV 240

Query: 241 NQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
              SS  DMSEKL RLSTDE  LTDWHLGFHIYL
Sbjct: 241 KHNSS-PDMSEKLARLSTDEMPLTDWHLGFHIYL 272

[Close]
BLAST of Csa1G616270 vs. TrEMBL
Match: A0A061DQM0_THECC (Gamma-tubulin complex component OS=Theobroma cacao GN=TCM_004669 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119
Identity = 216/274 (78.83%), Postives = 244/274 (89.05%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLAL+GYTGDLIIDEREH+ SLGL +L  DAPIS + +FKLASDISF++ SERDL
Sbjct: 1   MLHELLLALVGYTGDLIIDEREHHKSLGL-HLSPDAPISDQRSFKLASDISFIDSSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           I+R+I LGFYYRELDRFATKSRNLSWIRS + S L  +   SK K E PSVYRRAIANG+
Sbjct: 61  IERLITLGFYYRELDRFATKSRNLSWIRSADVSPLERAAGLSKPKTEKPSVYRRAIANGL 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILS+YRSAVL +EQKLLSE +PILA VTQGL+KFFV+ PPL++LI EIERDDIRGGQL
Sbjct: 121 VEILSVYRSAVLQIEQKLLSETMPILATVTQGLNKFFVILPPLYELILEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQ CIQRLLWHGHQV+YNQLASWMVYG+LQD+HGEFFIRRQ+DR+ 
Sbjct: 181 LNLLHKRCHCGVPELQACIQRLLWHGHQVLYNQLASWMVYGILQDQHGEFFIRRQEDRDV 240

Query: 241 NQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
           + GSS+ DMSEKL RLSTD+ SLTDWHLGFHI+L
Sbjct: 241 DYGSSISDMSEKLARLSTDDSSLTDWHLGFHIFL 273

[Close]
BLAST of Csa1G616270 vs. TAIR10
Match: AT3G53760.1 (AT3G53760.1 GAMMA-TUBULIN COMPLEX PROTEIN 4)

HSP 1 Score: 387.9 bits (995), Expect = 6.1e-108
Identity = 199/276 (72.10%), Postives = 230/276 (83.33%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLG+TGDLI+DERE   +LGL     D+P+S E TFKLA DISF+EPSERDL
Sbjct: 1   MLHELLLALLGFTGDLIVDEREQRKTLGLA-FNSDSPLSDECTFKLAPDISFIEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNE-SSLANSTESSKD-KIENPSVYRRAIAN 120
           I+R+I LGFYYRELDRFA KSRNLSWIRS      L  + E SK  + + PSVYRRAIAN
Sbjct: 61  IERLIKLGFYYRELDRFAKKSRNLSWIRSVTSVHPLERADELSKQSREKKPSVYRRAIAN 120

Query: 121 GIVEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGG 180
           GI EILS+YRSAVLH+EQKLL+E  PILA VT+GL+KFFVLFPPL+++I EIERDDIRGG
Sbjct: 121 GIGEILSVYRSAVLHIEQKLLAETTPILATVTEGLNKFFVLFPPLYEVILEIERDDIRGG 180

Query: 181 QLLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDR 240
           QLLN+L+KRCHCGVPEL+TC+QRLLW+GHQVMYNQLA+WMVYG+LQD HGEFFI+RQDD 
Sbjct: 181 QLLNVLNKRCHCGVPELRTCLQRLLWNGHQVMYNQLAAWMVYGILQDPHGEFFIKRQDDG 240

Query: 241 ETNQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
           + +  SS +++SEKL R S  E SLTDWH GFHI L
Sbjct: 241 DLDHRSSQEEVSEKLARTSVHETSLTDWHSGFHISL 275

[Close]
BLAST of Csa1G616270 vs. NCBI nr
Match: gi|700211413|gb|KGN66509.1| (hypothetical protein Csa_1G616270 [Cucumis sativus])

HSP 1 Score: 638.3 bits (1645), Expect = 7.3e-180
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYLGKQKCAKKTITMKEEFFEKLEEDASQE 300
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYLGKQKCAKKTITMKEEFFEKLEEDASQE
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYLGKQKCAKKTITMKEEFFEKLEEDASQE 300

Query: 301 DETNKQNYLDSNQKTSDS 319
           DETNKQNYLDSNQKTSDS
Sbjct: 301 DETNKQNYLDSNQKTSDS 318

[Close]
BLAST of Csa1G616270 vs. NCBI nr
Match: gi|778663742|ref|XP_011660150.1| (PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis sativus])

HSP 1 Score: 548.9 bits (1413), Expect = 5.9e-153
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 274
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 273

[Close]
BLAST of Csa1G616270 vs. NCBI nr
Match: gi|659130829|ref|XP_008465374.1| (PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis melo])

HSP 1 Score: 543.1 bits (1398), Expect = 3.2e-151
Identity = 270/273 (98.90%), Postives = 272/273 (99.63%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGL+NLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLNNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSE VPILAIVTQGLDKFFVLFPPLHQLIREIERDDI+GGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIQGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 274
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 273

[Close]
BLAST of Csa1G616270 vs. NCBI nr
Match: gi|659099008|ref|XP_008450387.1| (PREDICTED: gamma-tubulin complex component 4 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 538.1 bits (1385), Expect = 1.0e-149
Identity = 269/273 (98.53%), Postives = 270/273 (98.90%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHELLLALLGYTGDLIIDEREHYNSLGL+NLLVDAPISGEPTFKLASDISFLEPSERDL
Sbjct: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLNNLLVDAPISGEPTFKLASDISFLEPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKIENPSVYRRAIANGI 120
           IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLA STESSKDKIENPSVYRRAIANGI
Sbjct: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLAISTESSKDKIENPSVYRRAIANGI 120

Query: 121 VEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQL 180
           VEILSIYRSAVLHVEQKLLSE VPILAIVTQGLDKFFVLFPPLHQLI EIERDDIRGGQL
Sbjct: 121 VEILSIYRSAVLHVEQKLLSETVPILAIVTQGLDKFFVLFPPLHQLICEIERDDIRGGQL 180

Query: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240
           LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET
Sbjct: 181 LNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRET 240

Query: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 274
           NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL
Sbjct: 241 NQGSSVQDMSEKLGRLSTDESLTDWHLGFHIYL 273

[Close]
BLAST of Csa1G616270 vs. NCBI nr
Match: gi|703068591|ref|XP_010088277.1| (Gamma-tubulin complex component 4-like protein [Morus notabilis])

HSP 1 Score: 439.1 bits (1128), Expect = 6.5e-120
Identity = 222/275 (80.73%), Postives = 244/275 (88.73%), Query Frame = 1 

Query: 1   MLHELLLALLGYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDL 60
           MLHE+LLALLGYTGDLIIDER+H NSLG+  L  DAPI+ EPTFKLA DISFL+PSERDL
Sbjct: 1   MLHEVLLALLGYTGDLIIDERDHRNSLGIA-LSPDAPIADEPTFKLAPDISFLQPSERDL 60

Query: 61  IQRIIVLGFYYRELDRFATKSRNLSWIRSGNESSLANSTESSKDKI-ENPSVYRRAIANG 120
           I+RI+ LGFYYRELDRFATKSRNLSWIRS N S LA  +E SK K  +  SVYRRAIANG
Sbjct: 61  IERIVTLGFYYRELDRFATKSRNLSWIRSENASPLATISELSKGKTGKKQSVYRRAIANG 120

Query: 121 IVEILSIYRSAVLHVEQKLLSEMVPILAIVTQGLDKFFVLFPPLHQLIREIERDDIRGGQ 180
           IVEILS+YRSAVLH+EQKLLSE VPILA VTQGL+KFFVL PPL++L+ EIER+DIRGGQ
Sbjct: 121 IVEILSVYRSAVLHIEQKLLSETVPILATVTQGLNKFFVLLPPLYELVLEIERNDIRGGQ 180

Query: 181 LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRE 240
           LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYG LQD++GEFFIRRQ+DR+
Sbjct: 181 LLNLLHKRCHCGVPELQTCIQRLLWHGHQVMYNQLASWMVYGTLQDQYGEFFIRRQEDRD 240

Query: 241 TNQGSSVQDMSEKLGRLSTDE-SLTDWHLGFHIYL 274
              GSS  D+SEKL RLSTD+ SLTDWHLGFHIYL
Sbjct: 241 VEHGSSHSDISEKLARLSTDDTSLTDWHLGFHIYL 274

The following BLAST results are available for this feature:
BLAST of Csa1G616270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GACP4_ARATH1.1e-10672.10Gamma-tubulin complex component 4 OS=Arabidopsis thaliana GN=GCP4 PE=2 SV=2[more]
GCP4_MEDTR3.5e-10569.71Gamma-tubulin complex component 4 homolog OS=Medicago truncatula GN=85P PE=2 SV=... [more]
GCP4_HUMAN4.4e-2329.53Gamma-tubulin complex component 4 OS=Homo sapiens GN=TUBGCP4 PE=1 SV=1[more]
GCP4_MOUSE7.4e-2328.74Gamma-tubulin complex component 4 OS=Mus musculus GN=Tubgcp4 PE=1 SV=2[more]
BLAST of Csa1G616270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZT6_CUCSA5.1e-180100.00Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_1G616270 PE=3 SV=1[more]
W9QMJ5_9ROSA4.6e-12080.73Gamma-tubulin complex component OS=Morus notabilis GN=L484_011092 PE=3 SV=1[more]
M5VMI9_PRUPE7.8e-12079.56Gamma-tubulin complex component OS=Prunus persica GN=PRUPE_ppa001912mg PE=3 SV=1[more]
A0A067JWA3_JATCU1.3e-11980.29Gamma-tubulin complex component OS=Jatropha curcas GN=JCGZ_13943 PE=3 SV=1[more]
A0A061DQM0_THECC1.7e-11978.83Gamma-tubulin complex component OS=Theobroma cacao GN=TCM_004669 PE=3 SV=1[more]
BLAST of Csa1G616270 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G53760.16.1e-10872.10 GAMMA-TUBULIN COMPLEX PROTEIN 4[more]
BLAST of Csa1G616270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211413|gb|KGN66509.1|7.3e-180100.00hypothetical protein Csa_1G616270 [Cucumis sativus][more]
gi|778663742|ref|XP_011660150.1|5.9e-153100.00PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis sativus][more]
gi|659130829|ref|XP_008465374.1|3.2e-15198.90PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis melo][more]
gi|659099008|ref|XP_008450387.1|1.0e-14998.53PREDICTED: gamma-tubulin complex component 4 homolog isoform X1 [Cucumis melo][more]
gi|703068591|ref|XP_010088277.1|6.5e-12080.73Gamma-tubulin complex component 4-like protein [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007259GCP
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
GO:0007020microtubule nucleation
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043622 cortical microtubule organization
biological_process GO:0040007 growth
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009624 response to nematode
biological_process GO:0000226 microtubule cytoskeleton organization
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000922 spindle pole
cellular_component GO:0045298 tubulin complex
molecular_function GO:0043015 gamma-tubulin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G616270.1Csa1G616270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 108..271
score: 7.1E-80coord: 40..92
score: 7.1E-80coord: 1..22
score: 7.1
IPR007259Gamma-tubulin complex component proteinPFAMPF04130Spc97_Spc98coord: 4..266
score: 5.7
NoneNo IPR availablePANTHERPTHR19302:SF27GAMMA-TUBULIN COMPLEX COMPONENT 4coord: 1..22
score: 7.1E-80coord: 108..271
score: 7.1E-80coord: 40..92
score: 7.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G616270MELO3C015161Melon (DHL92) v3.5.1cumeB041
Csa1G616270CSPI01G30600Wild cucumber (PI 183967)cpicuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G616270Cucurbita pepo (Zucchini)cpecuB349
Csa1G616270Cucurbita pepo (Zucchini)cpecuB652
Csa1G616270Bottle gourd (USVL1VR-Ls)culsiB003
Csa1G616270Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G616270Cucumber (Gy14) v2cgybcuB002
Csa1G616270Cucumber (Gy14) v2cgybcuB243
Csa1G616270Melon (DHL92) v3.6.1cumedB033
Csa1G616270Melon (DHL92) v3.6.1cumedB067
Csa1G616270Silver-seed gourdcarcuB0457
Csa1G616270Silver-seed gourdcarcuB0499
Csa1G616270Silver-seed gourdcarcuB0551
Csa1G616270Watermelon (97103) v2cuwmbB030
Csa1G616270Watermelon (97103) v2cuwmbB042
Csa1G616270Wax gourdcuwgoB021
Csa1G616270Wax gourdcuwgoB096
Csa1G616270Cucumber (Chinese Long) v2cucuB043
Csa1G616270Cucumber (Gy14) v1cgycuB040
Csa1G616270Cucumber (Gy14) v1cgycuB165
Csa1G616270Cucurbita maxima (Rimu)cmacuB057
Csa1G616270Cucurbita maxima (Rimu)cmacuB085
Csa1G616270Cucurbita maxima (Rimu)cmacuB537
Csa1G616270Cucurbita moschata (Rifu)cmocuB075
Csa1G616270Cucurbita moschata (Rifu)cmocuB047
Csa1G616270Cucurbita moschata (Rifu)cmocuB528
Csa1G616270Melon (DHL92) v3.5.1cumeB072
Csa1G616270Watermelon (Charleston Gray)cuwcgB034
Csa1G616270Watermelon (Charleston Gray)cuwcgB046
Csa1G616270Watermelon (97103) v1cuwmB020
Csa1G616270Watermelon (97103) v1cuwmB071