CSPI01G23860 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G23860
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionNudC domain-containing protein, putative
LocationChr1 : 19322528 .. 19324769 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTCGTTAGGAAAAAGGAAAAAGCTTCGGTGAAATTCGCGGGAAAGGGAAGCAGCAAACCCTAAAGGGATGGCAGAGAAATTGGCTCCAGAAAAGCGCCATAGTTTCCTTCACAACGGTTTGTTCTTCATCCTTATCTATTTGATCTTCTAAATTTTCAATTTCAATGAATGAATTCATTGTTGTACGAGTTTTCTGATCTCTATACTTGTTTGCACGTGGTTTTTCAGGTCAGAAAGTGTTTGAATGGGATCAGACACTGGAGGAGGTTAACATTTATATTAATTTGCCTCCAAATGTTAATTCCAAGCAATTCTACTGCAAGATTCAATCTAGGCATGTCGAGCTTGGCATCAAGGGGAATCCTCCTTATCTCAATGTCGGTATCATTGGCATTTTTATAGATTTAATTTTGAAATTTAGATATACTGCTTGGTTTATGACTGTACCTATTTGTTTCAATCATTCAATTTCAGCACGAGCTTACTTGCCCCGTGAAGACGGATTCTTCTTTCTGGACCTTAGGTGATTGCAAATTCTTGCGTTAATCACTAAAATGGAATTTTGGATACCAAGTAAATTTCATGGCACTGAATTCAGCTGGAGGCTTCAGGAATTTTGTTATTTAACTGCTTTTGTTTATTTGGTGTGGCAGAGGATGATATAATGCACATTACACTGCAGAAGAGGGACAGGGGTCAGACATGGGCTTCCCCAATACAGGGTCAGGGTCAACTTGATCCTTACTCCTCTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGGTCAGATTTTTTTTTTTTTTTGGGTACTCTTTGTTTCTTTTCTGGAGCATTTTTACCATTTTTATTTAGAGATCAATTGTTTCAAGTTATCCAAATCGATTATTTATGGGAGATTCCTTGCTCAAGCTAATTGAGTAATAGTTATTGAGATGTTGTGATTACTACTTGTTGTTGGCATCTGAAACGAGGTTGATGTGCCTTGTAAAAAATAAAGGCTATCGTGTCTGGAAAATCATGACATAGAGAGAGCTTGTGGTCTATTTCATCTCATTCGAGGCATTTTTTCAAAAGTTAATTAGGTGCAACTGGTAGGAAAGAACCCCAACTCAATAGGCCAACTCATTGTCCAAGTGATATCCCTACAGTATCATCTCTCATTTAGAAAAAAAAAATCTTGATTCAAGACACTACCATGTTTTTCTAGATAAGCAAGACTCTACAGAAAGAATCTTAAATTAACATATATTAATATGTTGAAAAAGATATGGCACTCCCATGAGTTCATGCCATAATGGGAGTGCCATCATGATGGCATGAACTTGTGACAAGCTCTTGCACCAACTGATGTAGGATGGATGAGACAATGTTTCAAAAGTGATAGTTGATACAAGAGAGCTCTACTATTCATATAATGTCATAAAAGTTAGTTCATTAATTATGGATGAGGTGTTGTAGGATTCTTGCTACTTATTAAAATTTGATTTTTTACTGGTTTTATATATCCCACAAGTGGGCAGCGTGTTTTTATGTCTTTTTTTGGCTTACTGTTGAAAAGTAATGATATTTTAGAAATACACGAATGGGTTTCTTTTAATTTCAGAAGTCCTGATTTAAGTTCAGTTAAGTAATGAAACCTTGAAATTTAACCTGCACTAATTATTTCTCTGCAGAACCCTGGATTTGACTTTTCACAAGCTCAGTTTTCAGGCAACTGTCCTGATCCAAGGACCTTCATGGGGGGAATTCGCTAAGTTTGACAAATTTAGTGTGGCATTTATAACTTGCATGGACGTGACATTCGGTAAATAATGTAGTTTTTGTACTGGTCTTGATTTATGCAAATCCTGTAATGACCACGTTTGTGAGAAGGATATGTACTGAGTCCATTCTCTGTATTGAAGTGAAAATATTTAGGTGATATAAATTTAACTACCAACATTCTGTCTTTTAGCCTTCTCTTTGGTTTGATATAAACAAGAGTTCCAAATTTGATAGCAGGTGCTAGTTCATGGTAAAAATAGGTACCGAATCATCATTCTCCATATATTTGTTTACCCAAATCTCATTCCCAGTAAAATAGAGAAGGGGCCTCTTTAGTTTAAGTTCTCCCTGGCCAACCAAATTATGATGAGATGCTGTTTAGATTTTTAGTTCGTGTGTAACAGCTCATATTGAATGCATTTTGCTGCTGGGGCCTATTTTGTTGCACTTGTCATTGGCTGC

mRNA sequence

ATGGCAGAGAAATTGGCTCCAGAAAAGCGCCATAGTTTCCTTCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACACTGGAGGAGGTTAACATTTATATTAATTTGCCTCCAAATGTTAATTCCAAGCAATTCTACTGCAAGATTCAATCTAGGCATGTCGAGCTTGGCATCAAGGGGAATCCTCCTTATCTCAATCACGAGCTTACTTGCCCCGTGAAGACGGATTCTTCTTTCTGGACCTTAGAGGATGATATAATGCACATTACACTGCAGAAGAGGGACAGGGGTCAGACATGGGCTTCCCCAATACAGGGTCAGGGTCAACTTGATCCTTACTCCTCTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGATTTGACTTTTCACAAGCTCAGTTTTCAGGCAACTGTCCTGATCCAAGGACCTTCATGGGGGGAATTCGCTAA

Coding sequence (CDS)

ATGGCAGAGAAATTGGCTCCAGAAAAGCGCCATAGTTTCCTTCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACACTGGAGGAGGTTAACATTTATATTAATTTGCCTCCAAATGTTAATTCCAAGCAATTCTACTGCAAGATTCAATCTAGGCATGTCGAGCTTGGCATCAAGGGGAATCCTCCTTATCTCAATCACGAGCTTACTTGCCCCGTGAAGACGGATTCTTCTTTCTGGACCTTAGAGGATGATATAATGCACATTACACTGCAGAAGAGGGACAGGGGTCAGACATGGGCTTCCCCAATACAGGGTCAGGGTCAACTTGATCCTTACTCCTCTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGATTTGACTTTTCACAAGCTCAGTTTTCAGGCAACTGTCCTGATCCAAGGACCTTCATGGGGGGAATTCGCTAA
Homology
[Close]
BLAST of CSPI01G23860 vs. Swiss-Prot
Match: NUDC2_HUMAN (NudC domain-containing protein 2 OS=Homo sapiens GN=NUDCD2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 1 

Query: 8   EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKGNPPYLNH 67
           E+R   +  G    +W QTLEEV I + +PP   ++   C +QSRHV L + G    L  
Sbjct: 6   EERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSVGGRE-ILKG 65

Query: 68  ELTCPVKTDSSFWTLEDDIMH---ITLQKRDRGQTWASPIQGQGQLDPYSSDLEQKRLML 127
           +L      D   WTLED  M    +T  KRD    W S ++ +   DP+  D  Q++L L
Sbjct: 66  KLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTL 125

Query: 128 QRFQEENPGFDFSQAQFSGN 145
           +RFQ+ENPGFDFS A+ SGN
Sbjct: 126 ERFQKENPGFDFSGAEISGN 144

[Close]
BLAST of CSPI01G23860 vs. Swiss-Prot
Match: NUDC2_MOUSE (NudC domain-containing protein 2 OS=Mus musculus GN=Nudcd2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 1 

Query: 8   EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKGNPPYLNH 67
           E+R   +  G    +W QTLEEV I + +PP   ++   C +QSRHV L + G    L  
Sbjct: 6   EERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKG 65

Query: 68  ELTCPVKTDSSFWTLEDDIMH---ITLQKRDRGQTWASPIQGQGQLDPYSSDLEQKRLML 127
           +L      D   WTLED  M    +T  KRD    W S ++ +   DP+  D  Q++L L
Sbjct: 66  KLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTL 125

Query: 128 QRFQEENPGFDFSQAQFSGN 145
           +RFQ+ENPGFDFS A+ SGN
Sbjct: 126 ERFQKENPGFDFSGAEISGN 144

[Close]
BLAST of CSPI01G23860 vs. Swiss-Prot
Match: NUDC2_RAT (NudC domain-containing protein 2 OS=Rattus norvegicus GN=Nudcd2 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21
Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 1 

Query: 22  EWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKGNPPYLNHELTCPVKTDSSFWT 81
           +W QTLEEV I + +PP   ++   C +QSRHV L + G    L  +L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKGKLFDSTIADEGTWT 79

Query: 82  LEDDIMH---ITLQKRDRGQTWASPIQGQGQLDPYSSDLEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KRD    W S ++ +   DP+  D  Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 AQFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144

[Close]
BLAST of CSPI01G23860 vs. Swiss-Prot
Match: BOB1_ARATH (Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 43/158 (27.22%), Postives = 75/158 (47.47%), Query Frame = 1 

Query: 21  FEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKGNPPYLNHELTCPVKTDSSFW 80
           + W Q L+EV + I +P    ++   C+I+   +++G+KG  P ++ EL   VK D  +W
Sbjct: 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYW 206

Query: 81  TLEDD-IMHITLQKRDRGQTWASPIQGQ---------------GQLDPY----------- 140
            +ED  ++ I L K D+ + W   ++G+               G LDP            
Sbjct: 207 NIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFD 266

Query: 141 ---------SSDLEQKRLMLQRFQEENPGFDFSQAQFS 143
                    +S+  QK+ +L++F  E+P  DFS A+F+
Sbjct: 267 QRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]
BLAST of CSPI01G23860 vs. Swiss-Prot
Match: NUDC_MOUSE (Nuclear migration protein nudC OS=Mus musculus GN=Nudc PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.7e-09
Identity = 39/160 (24.38%), Postives = 77/160 (48.12%), Query Frame = 1 

Query: 21  FEWDQTLEEVNIYI--NLPPNVNSKQFYCKIQSRHVELGIKGNPPYLNHELTCPVKTDSS 80
           + W QTL E+++ +   +   +  K     IQ RH+ +G+KG PP ++ EL   VK + S
Sbjct: 173 YRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEES 232

Query: 81  FWTLED-DIMHITLQKRDRGQTW-----ASPIQGQGQLDPYSSDL--------------- 140
            W +ED  ++ + L+K ++ + W     + P     +++P +S L               
Sbjct: 233 SWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMM 292

Query: 141 ---------------EQKRLMLQRFQEENPGFDFSQAQFS 143
                          ++K+ +L++F +++P  DFS+A+F+
Sbjct: 293 YDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332

[Close]
BLAST of CSPI01G23860 vs. TrEMBL
Match: A0A0A0LV57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G530660 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 7.8e-89
Identity = 154/156 (98.72%), Postives = 156/156 (100.00%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRD+GQTWASPIQGQGQLDPYSSDLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. TrEMBL
Match: V7BQ97_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G068000g PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 5.2e-85
Identity = 144/156 (92.31%), Postives = 155/156 (99.36%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRH+F+HNG+KVFEWDQTL+EVNIYINLPPNV+SKQFYCKIQS+H+ELGIKG
Sbjct: 1   MAEKLAPEKRHNFIHNGEKVFEWDQTLDEVNIYINLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNH+LTCPVKTDSSFWTLEDDIMHIT+QKRD+GQTWASPI GQGQLDPYS+DLEQK
Sbjct: 61  NPPYLNHDLTCPVKTDSSFWTLEDDIMHITMQKRDKGQTWASPILGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. TrEMBL
Match: A0A0S3S6D8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G181900 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 6.8e-85
Identity = 145/156 (92.95%), Postives = 154/156 (98.72%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRHSF+HNG+KVFEWDQTL+EVNIYINLPPNV+SKQFYCKIQS+H+ELGIKG
Sbjct: 1   MAEKLAPEKRHSFIHNGEKVFEWDQTLDEVNIYINLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNH+L CPVKTDSSFWTLEDDIMHITLQKRD+GQTWASPI GQGQLDPYS+DLEQK
Sbjct: 61  NPPYLNHDLPCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. TrEMBL
Match: W9RXB5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022008 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 2.6e-84
Identity = 145/156 (92.95%), Postives = 152/156 (97.44%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRHSF+HNGQKVFEWDQTLEEVN+YINLPPNV  KQFYCKIQS+HVE+GIK 
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLEEVNVYINLPPNVRPKQFYCKIQSKHVEVGIKD 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           +PPYLNH+LTCPVKTDSSFWTLEDDIMHITLQKRD+GQTWASPI GQGQLDPYSSDLEQK
Sbjct: 61  SPPYLNHDLTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. TrEMBL
Match: I1LLK0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G175500 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.3e-83
Identity = 144/156 (92.31%), Postives = 153/156 (98.08%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRHSF+HNGQKVFEWDQTL+EVNIYI LPPNV+SKQFYCKIQS+H+ELGIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYIALPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNH+LT PVKTDSSFWTLEDDIMHITLQKRD+GQTWASPI GQGQLDPY++DLEQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPISGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. TAIR10
Match: AT5G58740.1 (AT5G58740.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 303.5 bits (776), Expect = 7.4e-83
Identity = 135/156 (86.54%), Postives = 149/156 (95.51%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRH F+HNGQKVFEWDQTLEEVN+YI LPPNV+ K F+CKIQS+H+E+GIKG
Sbjct: 1   MAEKLAPEKRHDFIHNGQKVFEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNH+L+ PVKTD SFWTLEDDIMHITLQKR++GQTWASPI GQGQLDPY++DLEQK
Sbjct: 61  NPPYLNHDLSAPVKTDCSFWTLEDDIMHITLQKREKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. TAIR10
Match: AT5G53400.1 (AT5G53400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 7.3e-14
Identity = 43/158 (27.22%), Postives = 75/158 (47.47%), Query Frame = 1 

Query: 21  FEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKGNPPYLNHELTCPVKTDSSFW 80
           + W Q L+EV + I +P    ++   C+I+   +++G+KG  P ++ EL   VK D  +W
Sbjct: 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYW 206

Query: 81  TLEDD-IMHITLQKRDRGQTWASPIQGQ---------------GQLDPY----------- 140
            +ED  ++ I L K D+ + W   ++G+               G LDP            
Sbjct: 207 NIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFD 266

Query: 141 ---------SSDLEQKRLMLQRFQEENPGFDFSQAQFS 143
                    +S+  QK+ +L++F  E+P  DFS A+F+
Sbjct: 267 QRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]
BLAST of CSPI01G23860 vs. NCBI nr
Match: gi|659115075|ref|XP_008457374.1| (PREDICTED: nudC domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 8.6e-89
Identity = 154/156 (98.72%), Postives = 156/156 (100.00%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVEVGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRD+GQTWASPIQGQGQLDPYSSDLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. NCBI nr
Match: gi|449467493|ref|XP_004151457.1| (PREDICTED: nudC domain-containing protein 2 [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 1.1e-88
Identity = 154/156 (98.72%), Postives = 156/156 (100.00%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRD+GQTWASPIQGQGQLDPYSSDLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. NCBI nr
Match: gi|593692450|ref|XP_007146767.1| (hypothetical protein PHAVU_006G068000g [Phaseolus vulgaris])

HSP 1 Score: 321.6 bits (823), Expect = 7.5e-85
Identity = 144/156 (92.31%), Postives = 155/156 (99.36%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRH+F+HNG+KVFEWDQTL+EVNIYINLPPNV+SKQFYCKIQS+H+ELGIKG
Sbjct: 1   MAEKLAPEKRHNFIHNGEKVFEWDQTLDEVNIYINLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNH+LTCPVKTDSSFWTLEDDIMHIT+QKRD+GQTWASPI GQGQLDPYS+DLEQK
Sbjct: 61  NPPYLNHDLTCPVKTDSSFWTLEDDIMHITMQKRDKGQTWASPILGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. NCBI nr
Match: gi|951040171|ref|XP_014517602.1| (PREDICTED: nudC domain-containing protein 2 [Vigna radiata var. radiata])

HSP 1 Score: 321.2 bits (822), Expect = 9.8e-85
Identity = 145/156 (92.95%), Postives = 154/156 (98.72%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRHSF+HNG+KVFEWDQTL+EVNIYINLPPNV+SKQFYCKIQS+H+ELGIKG
Sbjct: 1   MAEKLAPEKRHSFIHNGEKVFEWDQTLDEVNIYINLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           NPPYLNH+L CPVKTDSSFWTLEDDIMHITLQKRD+GQTWASPI GQGQLDPYS+DLEQK
Sbjct: 61  NPPYLNHDLPCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]
BLAST of CSPI01G23860 vs. NCBI nr
Match: gi|703130523|ref|XP_010104631.1| (hypothetical protein L484_022008 [Morus notabilis])

HSP 1 Score: 319.3 bits (817), Expect = 3.7e-84
Identity = 145/156 (92.95%), Postives = 152/156 (97.44%), Query Frame = 1 

Query: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60
           MAEKLAPEKRHSF+HNGQKVFEWDQTLEEVN+YINLPPNV  KQFYCKIQS+HVE+GIK 
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLEEVNVYINLPPNVRPKQFYCKIQSKHVEVGIKD 60

Query: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDRGQTWASPIQGQGQLDPYSSDLEQK 120
           +PPYLNH+LTCPVKTDSSFWTLEDDIMHITLQKRD+GQTWASPI GQGQLDPYSSDLEQK
Sbjct: 61  SPPYLNHDLTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

The following BLAST results are available for this feature:
BLAST of CSPI01G23860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NUDC2_HUMAN1.2e-2140.71NudC domain-containing protein 2 OS=Homo sapiens GN=NUDCD2 PE=1 SV=1[more]
NUDC2_MOUSE1.2e-2140.71NudC domain-containing protein 2 OS=Mus musculus GN=Nudcd2 PE=1 SV=1[more]
NUDC2_RAT2.6e-2142.86NudC domain-containing protein 2 OS=Rattus norvegicus GN=Nudcd2 PE=2 SV=1[more]
BOB1_ARATH1.3e-1227.22Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1[more]
NUDC_MOUSE8.7e-0924.38Nuclear migration protein nudC OS=Mus musculus GN=Nudc PE=1 SV=1[more]
BLAST of CSPI01G23860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LV57_CUCSA7.8e-8998.72Uncharacterized protein OS=Cucumis sativus GN=Csa_1G530660 PE=4 SV=1[more]
V7BQ97_PHAVU5.2e-8592.31Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G068000g PE=4 SV=1[more]
A0A0S3S6D8_PHAAN6.8e-8592.95Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G181900 PE=... [more]
W9RXB5_9ROSA2.6e-8492.95Uncharacterized protein OS=Morus notabilis GN=L484_022008 PE=4 SV=1[more]
I1LLK0_SOYBN1.3e-8392.31Uncharacterized protein OS=Glycine max GN=GLYMA_11G175500 PE=4 SV=1[more]
BLAST of CSPI01G23860 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58740.17.4e-8386.54 HSP20-like chaperones superfamily protein[more]
AT5G53400.17.3e-1427.22 HSP20-like chaperones superfamily protein[more]
BLAST of CSPI01G23860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115075|ref|XP_008457374.1|8.6e-8998.72PREDICTED: nudC domain-containing protein 2 [Cucumis melo][more]
gi|449467493|ref|XP_004151457.1|1.1e-8898.72PREDICTED: nudC domain-containing protein 2 [Cucumis sativus][more]
gi|593692450|ref|XP_007146767.1|7.5e-8592.31hypothetical protein PHAVU_006G068000g [Phaseolus vulgaris][more]
gi|951040171|ref|XP_014517602.1|9.8e-8592.95PREDICTED: nudC domain-containing protein 2 [Vigna radiata var. radiata][more]
gi|703130523|ref|XP_010104631.1|3.7e-8492.95hypothetical protein L484_022008 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007052CS_dom
IPR008978HSP20-like_chaperone
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0032502 developmental process
biological_process GO:0006457 protein folding
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0019140 inositol 3-kinase activity
molecular_function GO:0051082 unfolded protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G23860.1CSPI01G23860.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007052CS domainPFAMPF04969CScoord: 21..93
score: 1.6
IPR007052CS domainPROFILEPS51203CScoord: 16..104
score: 15
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 19..149
score: 1.6
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 9..114
score: 9.24
NoneNo IPR availablePANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 1..156
score: 1.4
NoneNo IPR availablePANTHERPTHR12356:SF18NUDC DOMAIN-CONTAINING PROTEIN 2coord: 1..156
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G23860Cla008166Watermelon (97103) v1cpiwmB023
CSPI01G23860Csa1G530660Cucumber (Chinese Long) v2cpicuB001
CSPI01G23860MELO3C020551Melon (DHL92) v3.5.1cpimeB025
CSPI01G23860ClCG03G000770Watermelon (Charleston Gray)cpiwcgB050
CSPI01G23860Lsi02G012850Bottle gourd (USVL1VR-Ls)cpilsiB031
CSPI01G23860MELO3C020551.2Melon (DHL92) v3.6.1cpimedB024
CSPI01G23860CsaV3_1G036170Cucumber (Chinese Long) v3cpicucB000
CSPI01G23860Cla97C03G051580Watermelon (97103) v2cpiwmbB044
CSPI01G23860Bhi08G000423Wax gourdcpiwgoB048
CSPI01G23860CmaCh13G000680Cucurbita maxima (Rimu)cmacpiB220
CSPI01G23860CmaCh01G006620Cucurbita maxima (Rimu)cmacpiB430
CSPI01G23860CmoCh01G006940Cucurbita moschata (Rifu)cmocpiB420
CSPI01G23860CmoCh13G000570Cucurbita moschata (Rifu)cmocpiB206
CSPI01G23860Cp4.1LG02g11830Cucurbita pepo (Zucchini)cpecpiB531
CSPI01G23860Cp4.1LG20g08100Cucurbita pepo (Zucchini)cpecpiB507
CSPI01G23860CsGy1G023340Cucumber (Gy14) v2cgybcpiB002
CSPI01G23860Carg12428Silver-seed gourdcarcpiB0476
CSPI01G23860Carg20603Silver-seed gourdcarcpiB0415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G23860Watermelon (97103) v2cpiwmbB015
CSPI01G23860Wild cucumber (PI 183967)cpicpiB019
CSPI01G23860Wild cucumber (PI 183967)cpicpiB040
CSPI01G23860Cucumber (Gy14) v1cgycpiB214
CSPI01G23860Cucumber (Gy14) v1cgycpiB277
CSPI01G23860Cucurbita maxima (Rimu)cmacpiB236
CSPI01G23860Cucurbita maxima (Rimu)cmacpiB697
CSPI01G23860Cucurbita maxima (Rimu)cmacpiB699
CSPI01G23860Cucurbita moschata (Rifu)cmocpiB223
CSPI01G23860Cucurbita moschata (Rifu)cmocpiB691
CSPI01G23860Cucurbita moschata (Rifu)cmocpiB692
CSPI01G23860Cucumber (Chinese Long) v2cpicuB028
CSPI01G23860Melon (DHL92) v3.5.1cpimeB065
CSPI01G23860Watermelon (Charleston Gray)cpiwcgB004
CSPI01G23860Watermelon (97103) v1cpiwmB004
CSPI01G23860Cucurbita pepo (Zucchini)cpecpiB382
CSPI01G23860Melon (DHL92) v3.6.1cpimedB057
CSPI01G23860Silver-seed gourdcarcpiB0177
CSPI01G23860Silver-seed gourdcarcpiB0691
CSPI01G23860Silver-seed gourdcarcpiB1034