CSPI01G22570 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAAAGGTTGGGTGCAGTCCCGCTACAACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGTCCGCCCAGCTCCCTTCACCATCTTTCCCCAGAAAAACCTTTCTTTATTTCTTTCTCCGACGGAAATCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGTAACCTACCGTCTATGCTCGTATGAATTTCCGAGCTGATTCGATTTCCATGCCTTCTCTTTCAATACGATTTGATCTCACTGTCTTTTCCTTTTGGGTTGATATCCCAAATTGAACTGCAGGAACGACTGCTTGGTTTTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAGTAAGCGTAATTCCCCTTTCTTGTAACCCTAACGATAACCATTGTTTTGAGACAGTTAGGATGGCATTGCATTGAAAAATGTATGAAAATGTACGTCTTTGAATATTTGGATGTTTGGGTTTAAGGGGGAGAAGAGAATGGAATTATCAAAATTTTCGATAATGCAATTGTTAAACTAGTGTTATACATGTCTGAAAAGTGTATTAACCTATAAATTATGTGCTTTTTTAGTGTGCTTACTTTGTTATATCTATATAAATATTTTTTTGAAGATATATCAATATTAATTCATGCTAATTTTTTTTTCTATTTCAAAATTGAGAAATACATATCTTGTGAAAGATGTATAATTCCTTTTCTGAATTTTATACTTCCATCTAGCTACTAATCCGCTAATTTAATATCATTCTCTTTGAAACTACTTTAGATGAGAAAACCTGTGCTAGCAAAGAAGTATGGCCCAGAGTTTTCACACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGATATGTTGAGAATGGTTTCTTTCATCAATGTGTCTAATATCAATTTGTGAAACATGTAAGGAAACAGAATTTTAAATTACTAGTTTTAACATTCTGGATTATCAAAGAATTTATGTTATGTCCGTGAATCAAACTCCAGAGCCATGAGCTTTAGGCCTTTAAAGCAATAAAACTGCTCTTTTTCTTAATTCCTTTTTCCCTATGTATTTCATTGAGAAGTCATGTGGTTAAATTGTTAACATACTATTGTGGGGAGTGAGTAGTCGAATATTTGGTTAGTAGTTCCTCATATGAGCACGAGTGAGAATGCAATCAGTTATACACTGCTAGTGCTCATGAATTGATGAACTGATGGCTAAATACTATTGTATAATAGTCGTATAAAAGAGACAATTAACTAGCA ATGGCAGCAAAGGTTGGGTGCAGTCCCGCTACAACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGTCCGCCCAGCTCCCTTCACCATCTTTCCCCAGAAAAACCTTTCTTTATTTCTTTCTCCGACGGAAATCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGAACGACTGCTTGGTTTTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAATGAGAAAACCTGTGCTAGCAAAGAAGTATGGCCCAGAGTTTTCACACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGA ATGGCAGCAAAGGTTGGGTGCAGTCCCGCTACAACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGTCCGCCCAGCTCCCTTCACCATCTTTCCCCAGAAAAACCTTTCTTTATTTCTTTCTCCGACGGAAATCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGAACGACTGCTTGGTTTTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAATGAGAAAACCTGTGCTAGCAAAGAAGTATGGCCCAGAGTTTTCACACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGA
BLAST of CSPI01G22570 vs. TrEMBL
Match: A0A0A0LXB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G495270 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 2.2e-71 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1
BLAST of CSPI01G22570 vs. TrEMBL
Match: A0A067GCR9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034751mg PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.2e-21 Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 1
BLAST of CSPI01G22570 vs. TrEMBL
Match: V4UES1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029701mg PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.2e-21 Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 1
BLAST of CSPI01G22570 vs. TrEMBL
Match: M5W4P9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014126mg PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.7e-21 Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 1
BLAST of CSPI01G22570 vs. TrEMBL
Match: I1LQV3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G067600 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 3.0e-20 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 1
BLAST of CSPI01G22570 vs. TAIR10
Match: AT2G28430.1 (AT2G28430.1 unknown protein) HSP 1 Score: 91.3 bits (225), Expect = 5.1e-19 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 1
BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|700210583|gb|KGN65679.1| (hypothetical protein Csa_1G495270 [Cucumis sativus]) HSP 1 Score: 276.2 bits (705), Expect = 3.2e-71 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1
BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|449470380|ref|XP_004152895.1| (PREDICTED: uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus]) HSP 1 Score: 172.2 bits (435), Expect = 6.5e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1
BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|659115377|ref|XP_008457526.1| (PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo]) HSP 1 Score: 169.5 bits (428), Expect = 4.2e-39 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 1
BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|778661363|ref|XP_011657967.1| (PREDICTED: uncharacterized protein LOC101206005 isoform X1 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 2.1e-38 Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1
BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|659115375|ref|XP_008457525.1| (PREDICTED: uncharacterized protein LOC103497197 isoform X1 [Cucumis melo]) HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37 Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |