CSPI01G22570 (gene) Wild cucumber (PI 183967)

NameCSPI01G22570
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAt2g28430/T1B3.5
LocationChr1 : 18147310 .. 18148674 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCAAAGGTTGGGTGCAGTCCCGCTACAACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGTCCGCCCAGCTCCCTTCACCATCTTTCCCCAGAAAAACCTTTCTTTATTTCTTTCTCCGACGGAAATCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGTAACCTACCGTCTATGCTCGTATGAATTTCCGAGCTGATTCGATTTCCATGCCTTCTCTTTCAATACGATTTGATCTCACTGTCTTTTCCTTTTGGGTTGATATCCCAAATTGAACTGCAGGAACGACTGCTTGGTTTTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAGTAAGCGTAATTCCCCTTTCTTGTAACCCTAACGATAACCATTGTTTTGAGACAGTTAGGATGGCATTGCATTGAAAAATGTATGAAAATGTACGTCTTTGAATATTTGGATGTTTGGGTTTAAGGGGGAGAAGAGAATGGAATTATCAAAATTTTCGATAATGCAATTGTTAAACTAGTGTTATACATGTCTGAAAAGTGTATTAACCTATAAATTATGTGCTTTTTTAGTGTGCTTACTTTGTTATATCTATATAAATATTTTTTTGAAGATATATCAATATTAATTCATGCTAATTTTTTTTTCTATTTCAAAATTGAGAAATACATATCTTGTGAAAGATGTATAATTCCTTTTCTGAATTTTATACTTCCATCTAGCTACTAATCCGCTAATTTAATATCATTCTCTTTGAAACTACTTTAGATGAGAAAACCTGTGCTAGCAAAGAAGTATGGCCCAGAGTTTTCACACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGATATGTTGAGAATGGTTTCTTTCATCAATGTGTCTAATATCAATTTGTGAAACATGTAAGGAAACAGAATTTTAAATTACTAGTTTTAACATTCTGGATTATCAAAGAATTTATGTTATGTCCGTGAATCAAACTCCAGAGCCATGAGCTTTAGGCCTTTAAAGCAATAAAACTGCTCTTTTTCTTAATTCCTTTTTCCCTATGTATTTCATTGAGAAGTCATGTGGTTAAATTGTTAACATACTATTGTGGGGAGTGAGTAGTCGAATATTTGGTTAGTAGTTCCTCATATGAGCACGAGTGAGAATGCAATCAGTTATACACTGCTAGTGCTCATGAATTGATGAACTGATGGCTAAATACTATTGTATAATAGTCGTATAAAAGAGACAATTAACTAGCA

mRNA sequence

ATGGCAGCAAAGGTTGGGTGCAGTCCCGCTACAACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGTCCGCCCAGCTCCCTTCACCATCTTTCCCCAGAAAAACCTTTCTTTATTTCTTTCTCCGACGGAAATCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGAACGACTGCTTGGTTTTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAATGAGAAAACCTGTGCTAGCAAAGAAGTATGGCCCAGAGTTTTCACACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGA

Coding sequence (CDS)

ATGGCAGCAAAGGTTGGGTGCAGTCCCGCTACAACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGTCCGCCCAGCTCCCTTCACCATCTTTCCCCAGAAAAACCTTTCTTTATTTCTTTCTCCGACGGAAATCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGAACGACTGCTTGGTTTTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAATGAGAAAACCTGTGCTAGCAAAGAAGTATGGCCCAGAGTTTTCACACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGA
BLAST of CSPI01G22570 vs. TrEMBL
Match: A0A0A0LXB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G495270 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.2e-71
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1

Query: 1   MAAKVGCSPATTEGSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQ 60
           MAAKVGCSPATTE SLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQ
Sbjct: 1   MAAKVGCSPATTESSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQ 60

Query: 61  ERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRA 120
           ERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRA
Sbjct: 61  ERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRA 120

Query: 121 VDQTFGPVIQALSSRGW 138
           VDQTFGPVIQALSSRGW
Sbjct: 121 VDQTFGPVIQALSSRGW 137

BLAST of CSPI01G22570 vs. TrEMBL
Match: A0A067GCR9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034751mg PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-21
Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYP-PATQSPMRKPVLAKKYGPE 113
           MISVLAQERLLGFALGS   G VVFEQRK +Y SIS++      +S  R+P+ A+K   E
Sbjct: 1   MISVLAQERLLGFALGSAITGFVVFEQRKCIYGSISDHQSHDEIKSQTREPIFARKTRSE 60

Query: 114 FSHLWNRAVDQTFGPVIQALSSRGW 138
           F+HLWN+AVDQTFGPVI++ SSRGW
Sbjct: 61  FAHLWNKAVDQTFGPVIESFSSRGW 85

BLAST of CSPI01G22570 vs. TrEMBL
Match: V4UES1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029701mg PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-21
Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYP-PATQSPMRKPVLAKKYGPE 113
           MISVLAQERLLGFALGS   G VVFEQRK +Y SIS++      +S  R+P+ A+K   E
Sbjct: 1   MISVLAQERLLGFALGSAITGFVVFEQRKCIYGSISDHQSHDEIKSQTREPIFARKTRSE 60

Query: 114 FSHLWNRAVDQTFGPVIQALSSRGW 138
           F+HLWN+AVDQTFGPVI++ SSRGW
Sbjct: 61  FAHLWNKAVDQTFGPVIESFSSRGW 85

BLAST of CSPI01G22570 vs. TrEMBL
Match: M5W4P9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014126mg PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.7e-21
Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPA-TQSPMRKPVLAKKYGPE 113
           MIS+LAQERLLG ALGS+F G+VVFEQR+ +Y SIS     + TQS +R+P+   K   E
Sbjct: 1   MISILAQERLLGAALGSIFTGIVVFEQRRCIYNSISGTKSQSVTQSQIREPIFGSKSRAE 60

Query: 114 FSHLWNRAVDQTFGPVIQALSSRGW 138
           F+HLWN+AVDQTF PVI++LSS GW
Sbjct: 61  FAHLWNKAVDQTFRPVIESLSSSGW 85

BLAST of CSPI01G22570 vs. TrEMBL
Match: I1LQV3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G067600 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-20
Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF 113
           MIS+L+QERLLG +LG V  GVVVFEQR+ +Y SIS++     QS +++P+  KK   EF
Sbjct: 1   MISILSQERLLGASLGVVLTGVVVFEQRRYIYASISDS-----QSQVKEPIFGKKSRSEF 60

Query: 114 SHLWNRAVDQTFGPVIQALSSRGW 138
           SHLWN+ VDQTFGP+I++LSSRGW
Sbjct: 61  SHLWNKTVDQTFGPLIKSLSSRGW 79

BLAST of CSPI01G22570 vs. TAIR10
Match: AT2G28430.1 (AT2G28430.1 unknown protein)

HSP 1 Score: 91.3 bits (225), Expect = 5.1e-19
Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISE-NYPPATQSPMRKPVLAKKYGPE 113
           MIS+LAQERLLG+ LGS   G +VFEQRK ++ S+S+       Q+ +   +  KKY  E
Sbjct: 1   MISILAQERLLGYTLGSALTGFIVFEQRKLIHDSVSDPKSQSIDQAQVSDRIFGKKYRME 60

Query: 114 FSHLWNRAVDQTFGPVIQALSSRGW 138
           F+ LWN+AVDQTF P I+ LSSR W
Sbjct: 61  FASLWNKAVDQTFEPAIEYLSSRKW 85

BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|700210583|gb|KGN65679.1| (hypothetical protein Csa_1G495270 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 3.2e-71
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1

Query: 1   MAAKVGCSPATTEGSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQ 60
           MAAKVGCSPATTE SLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQ
Sbjct: 1   MAAKVGCSPATTESSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQ 60

Query: 61  ERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRA 120
           ERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRA
Sbjct: 61  ERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRA 120

Query: 121 VDQTFGPVIQALSSRGW 138
           VDQTFGPVIQALSSRGW
Sbjct: 121 VDQTFGPVIQALSSRGW 137

BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|449470380|ref|XP_004152895.1| (PREDICTED: uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 6.5e-40
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF 113
           MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF
Sbjct: 1   MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF 60

Query: 114 SHLWNRAVDQTFGPVIQALSSRGW 138
           SHLWNRAVDQTFGPVIQALSSRGW
Sbjct: 61  SHLWNRAVDQTFGPVIQALSSRGW 84

BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|659115377|ref|XP_008457526.1| (PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 4.2e-39
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF 113
           MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF
Sbjct: 1   MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF 60

Query: 114 SHLWNRAVDQTFGPVIQALSSRGW 138
           SHLWNRAVDQTFGP+IQALSSRGW
Sbjct: 61  SHLWNRAVDQTFGPMIQALSSRGW 84

BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|778661363|ref|XP_011657967.1| (PREDICTED: uncharacterized protein LOC101206005 isoform X1 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-38
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGP 113
           MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGP
Sbjct: 1   MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60

Query: 114 EFSHLWNRAVDQTFGPVIQALSSRGW 138
           EFSHLWNRAVDQTFGPVIQALSSRGW
Sbjct: 61  EFSHLWNRAVDQTFGPVIQALSSRGW 86

BLAST of CSPI01G22570 vs. NCBI nr
Match: gi|659115375|ref|XP_008457525.1| (PREDICTED: uncharacterized protein LOC103497197 isoform X1 [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37
Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 1

Query: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGP 113
           MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGP
Sbjct: 1   MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60

Query: 114 EFSHLWNRAVDQTFGPVIQALSSRGW 138
           EFSHLWNRAVDQTFGP+IQALSSRGW
Sbjct: 61  EFSHLWNRAVDQTFGPMIQALSSRGW 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LXB2_CUCSA2.2e-7199.27Uncharacterized protein OS=Cucumis sativus GN=Csa_1G495270 PE=4 SV=1[more]
A0A067GCR9_CITSI1.2e-2164.71Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034751mg PE=4 SV=1[more]
V4UES1_9ROSI1.2e-2164.71Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029701mg PE=4 SV=1[more]
M5W4P9_PRUPE4.7e-2162.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014126mg PE=4 SV=1[more]
I1LQV3_SOYBN3.0e-2060.71Uncharacterized protein OS=Glycine max GN=GLYMA_12G067600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G28430.15.1e-1952.94 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700210583|gb|KGN65679.1|3.2e-7199.27hypothetical protein Csa_1G495270 [Cucumis sativus][more]
gi|449470380|ref|XP_004152895.1|6.5e-40100.00PREDICTED: uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus][more]
gi|659115377|ref|XP_008457526.1|4.2e-3997.62PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo][more]
gi|778661363|ref|XP_011657967.1|2.1e-3897.67PREDICTED: uncharacterized protein LOC101206005 isoform X1 [Cucumis sativus][more]
gi|659115375|ref|XP_008457525.1|1.3e-3795.35PREDICTED: uncharacterized protein LOC103497197 isoform X1 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0007018 microtubule-based movement
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005871 kinesin complex
cellular_component GO:0005874 microtubule
cellular_component GO:0005886 plasma membrane
cellular_component GO:0045298 tubulin complex
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0016174 NAD(P)H oxidase activity
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G22570.1CSPI01G22570.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37720FAMILY NOT NAMEDcoord: 30..137
score: 3.2
NoneNo IPR availablePANTHERPTHR37720:SF1SUBFAMILY NOT NAMEDcoord: 30..137
score: 3.2

The following gene(s) are paralogous to this gene:

None