CSPI01G15670 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G15670
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Transcription factor, MADS-box
Location	Chr1 : 11221249 .. 11221910 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGTTTTAACGGTCGACTCTTTCTCTAAAACCCTCTTTCACTTTCTTGACGATGAAGAAGTCTTCAGGGCGTCGAAAGATTGAGATCAAAAGGCTTGACAAGAACACTACACGCCAGGTTACTTTCTCAAAACGTCGCGTCGGACTTTTCAACAAGGCAGCCGAGCTTTCCCTTCTCTGCGGCGCTGAGATCGCCATCCTCCTCTTCTCCTCCCGCGGAAAAGTCTATACATTCGGCCATCCCAACGTCGACGCTCTCCTCGACCGCTTTCTCACTGGAAACTTTCTTCCGCCCAAGCCGGCGGAGGCGTATCTCCCTCTCCCGGAGTTGAATCTTGATCTCTGCAAAGCGGAAGCCGAATTTGAAATCGAGAAGAAGCGCGCGGTGGAGAGATTGAGGAATAGCGACCGATTTTGGTGGGATGAGGCGCTGGAACGTATGAGAATGGATGAGTTGAAGTCATTCCGTTCTTCACTGCTCCAACTGAGAGCAAATGTGGCGGGGAGATTGGAGAAAATTCGGGCGATGAGAATGGAAGATCCTCCGGTAACTCCATCGTGGTCGATCGTTCTTGGTGGAGAAAATCAATGTGCGGCGTCGTTTCACGTGGGTGAAAATCAATCGTTTGCGATGGATTGGGAAGAGGAGATTTGGGGTTAG

mRNA sequence

ATGAAGAAGTCTTCAGGGCGTCGAAAGATTGAGATCAAAAGGCTTGACAAGAACACTACACGCCAGGTTACTTTCTCAAAACGTCGCGTCGGACTTTTCAACAAGGCAGCCGAGCTTTCCCTTCTCTGCGGCGCTGAGATCGCCATCCTCCTCTTCTCCTCCCGCGGAAAAGTCTATACATTCGGCCATCCCAACGTCGACGCTCTCCTCGACCGCTTTCTCACTGGAAACTTTCTTCCGCCCAAGCCGGCGGAGGCGTATCTCCCTCTCCCGGAGTTGAATCTTGATCTCTGCAAAGCGGAAGCCGAATTTGAAATCGAGAAGAAGCGCGCGGTGGAGAGATTGAGGAATAGCGACCGATTTTGGTGGGATGAGGCGCTGGAACGTATGAGAATGGATGAGTTGAAGTCATTCCGTTCTTCACTGCTCCAACTGAGAGCAAATGTGGCGGGGAGATTGGAGAAAATTCGGGCGATGAGAATGGAAGATCCTCCGGTAACTCCATCGTGGTCGATCGTTCTTGGTGGAGAAAATCAATGTGCGGCGTCGTTTCACGTGGGTGAAAATCAATCGTTTGCGATGGATTGGGAAGAGGAGATTTGGGGTTAG

Coding sequence (CDS)

ATGAAGAAGTCTTCAGGGCGTCGAAAGATTGAGATCAAAAGGCTTGACAAGAACACTACACGCCAGGTTACTTTCTCAAAACGTCGCGTCGGACTTTTCAACAAGGCAGCCGAGCTTTCCCTTCTCTGCGGCGCTGAGATCGCCATCCTCCTCTTCTCCTCCCGCGGAAAAGTCTATACATTCGGCCATCCCAACGTCGACGCTCTCCTCGACCGCTTTCTCACTGGAAACTTTCTTCCGCCCAAGCCGGCGGAGGCGTATCTCCCTCTCCCGGAGTTGAATCTTGATCTCTGCAAAGCGGAAGCCGAATTTGAAATCGAGAAGAAGCGCGCGGTGGAGAGATTGAGGAATAGCGACCGATTTTGGTGGGATGAGGCGCTGGAACGTATGAGAATGGATGAGTTGAAGTCATTCCGTTCTTCACTGCTCCAACTGAGAGCAAATGTGGCGGGGAGATTGGAGAAAATTCGGGCGATGAGAATGGAAGATCCTCCGGTAACTCCATCGTGGTCGATCGTTCTTGGTGGAGAAAATCAATGTGCGGCGTCGTTTCACGTGGGTGAAAATCAATCGTTTGCGATGGATTGGGAAGAGGAGATTTGGGGTTAG

Homology

[Close]

BLAST of CSPI01G15670 vs. Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.1e-25
Identity = 63/159 (39.62%), Postives = 101/159 (63.52%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           +KKS GR+KIE+ ++   +  QVTFSKRR GLF KA+EL  LCGAE+AI++FS   KV++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDALLDRFLTGNFLPP--------KPAEAYLPLPELNLDLCKAEAEFEIEKKR-- 120
           FGHPNVD+++DRF+  N LPP        +       + +LN  L +  ++ E EKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 AVERLRNSDRF---WWDEALERMRMDELKSFRSSLLQLR 147
            ++++R   +    WW++ +E + + +L+ F+ +L  L+
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of CSPI01G15670 vs. Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-23
Identity = 65/159 (40.88%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           K+S GR+KI + ++ K + RQVTFSKRR GLF KA+EL  LCGAEI I++FS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDALLDRFLTGNFLPPKPAEAYLPLP----ELNLDLCKAEAEFEIEKKRA------ 121
           GHP+V+++LDR+++ N +    ++     P    ELN+ L    +E E EKK+       
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 -VERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANV 150
             E +R S   WW++ +E M M +L+  + +L +LR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of CSPI01G15670 vs. Swiss-Prot
Match: AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-19
Identity = 58/167 (34.73%), Postives = 97/167 (58.08%), Query Frame = 1


Query: 6   GRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTFGHPN 65
           GRRKI+++ +    TRQVTFSKRR GLF KA+EL+ LC AE+ I++FS  GK +++G PN
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VDALLDRFL-------------TGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEK-KRA 125
           +D++ +RF+             +GN+ P       L      LDL   E E E E+ +++
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYRPK------LKRLSERLDLLNQEVEAEKERGEKS 121

Query: 126 VERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRA 159
            E+L ++    + E++E + +DEL  ++  L  +   + G++  ++A
Sbjct: 122 QEKLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of CSPI01G15670 vs. Swiss-Prot
Match: AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.4e-19
Identity = 56/135 (41.48%), Postives = 80/135 (59.26%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           +KK+ GRRK+EI ++ K +  QVTFSKR+ GLF KA+E   LC A+IA+++FS  GKV++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDALLDRF----LTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLR 120
           FGHPNVD LLD F    +  N      +   L +  LN    + +AE E E+K    R +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 N-----SDRFWWDEA 127
           N     +   WW ++
Sbjct: 122 NERENENAEEWWSKS 136

[Close]

BLAST of CSPI01G15670 vs. Swiss-Prot
Match: AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 62/164 (37.80%), Postives = 90/164 (54.88%), Query Frame = 1


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           +K+ GRRKIE+ ++   +  QVTFSKRR GLF K +EL  LC AEIAI++FS  GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDALLD----RFLTGNFLPPKPAEAYLPLPELNLDLCK--AEAEFEIEKKRAV--- 121
           GHPNV+ LLD    R +  N      +   L +  LN  L +  AE E E E K+++   
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 ERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKI 157
           ER       WW  +   + + +  S +  L  L+  V  ++ ++
Sbjct: 123 ERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of CSPI01G15670 vs. TrEMBL
Match: A0A0A0LW53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 1.8e-109
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNS+R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180
           FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180

Query: 181 AASFHVGENQSFAMDWEEEIWG 203
           AASFHVGENQSFAMDWEEEIWG
Sbjct: 181 AASFHVGENQSFAMDWEEEIWG 202

[Close]

BLAST of CSPI01G15670 vs. TrEMBL
Match: A0A0A0LLS2_CUCSA (Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-51
Identity = 109/160 (68.12%), Postives = 131/160 (81.88%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKS GR+KIEIK+L+  + RQVTFSKRR GLFNKAAELS+L GAEIAIL+FSS  K+YT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVD L+DRFLT NF+PPKP EAYLPL ELN DL    AEFE EK+RA ER+R +  
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRA-ERMRKTGG 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMR 161
           FWWDEA+E M +++LK FRSSL++LR  VA R+E++ A+R
Sbjct: 121 FWWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVR 159

[Close]

BLAST of CSPI01G15670 vs. TrEMBL
Match: A0A0A0LE01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.7e-49
Identity = 107/211 (50.71%), Postives = 144/211 (68.25%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKK+ GR+KIEIK+L+K +++QVTFSKRR GLF KA ELS+LCGAE+AI++FS   K++ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSD- 120
           FGHP+VD LLDR+LTGN  PPKPAE+Y+P+ E N D      EFE EKKRA E +R ++ 
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

Query: 121 -----RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDP---------- 180
                 FWW EA+E +R++ELK FRS+L+ LRA VA R+EK+ A+R+  P          
Sbjct: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 188

Query: 181 PVTPSWSIVLGGENQC--AASFHVGENQSFA 194
           P+T S   ++G   +     +FH+  NQ  A
Sbjct: 189 PMTSSSFHLIGNHQELPPPTAFHLAGNQRVA 219

[Close]

BLAST of CSPI01G15670 vs. TrEMBL
Match: W9QW40_9ROSA (Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002949 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.2e-30
Identity = 75/172 (43.60%), Postives = 111/172 (64.53%), Query Frame = 1


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           KK+ GR++IEIK+L+  + +QVTFSKRR GLF KAAELS+LCG+E+A L+FS  GK++TF
Sbjct: 11  KKTQGRQRIEIKKLENGSNKQVTFSKRRSGLFRKAAELSVLCGSEVAALVFSPNGKLFTF 70

Query: 62  GHPNVDALLDRFLTGNFLPPKPAEAYLP------LPELNLDLCKAEAEFEIEKKRAVERL 121
           GHP+VD+++ R+  G    P  A +           E N D  +A  E E EK R  E  
Sbjct: 71  GHPSVDSVVLRYAHGTNTAPAAAASTSTNVVTNVSEEFNRDYVEAVKELEAEKTRLAEEK 130

Query: 122 RNS----DRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMED 164
           + +    ++FWWDE +E M M+EL+   ++L++LR  VA R++ ++A   E+
Sbjct: 131 KKAKIGGEKFWWDEGIEGMGMEELRQHMAALIELRRRVAARVQGLKAAPPEN 182

[Close]

BLAST of CSPI01G15670 vs. TrEMBL
Match: W9R6M2_9ROSA (Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002953 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28
Identity = 73/173 (42.20%), Postives = 108/173 (62.43%), Query Frame = 1


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           KK+ GR++IEIK+L+  + +QVTFSKRR GLF KAAELS+LCG+E+A L+FS   K++ F
Sbjct: 11  KKTQGRQRIEIKKLENGSNKQVTFSKRRSGLFKKAAELSVLCGSEVAALVFSPNSKLFAF 70

Query: 62  GHPNVDALLDRFLTGNFLPPKPAEAYLP-------LPELNLDLCKAEAEFEIEKKRAVER 121
           GHP+VD+++ R+  G       A A            E N D  +A  E E EK R  E 
Sbjct: 71  GHPSVDSIVLRYAHGTNTAAAAAAASTSTNVVTNVFEEFNRDYVEAVKELEAEKTRLAEE 130

Query: 122 LR----NSDRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMED 164
            +      ++FWWDE +E M M+EL+   ++L++LR  VA R+++++A   E+
Sbjct: 131 KKKEKIGGEKFWWDEGIEGMGMEELRQHMAALIELRRRVAARVQELKAAPPEN 183

[Close]

BLAST of CSPI01G15670 vs. TAIR10
Match: AT5G60440.1 (AT5G60440.1 AGAMOUS-like 62)

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26
Identity = 63/159 (39.62%), Postives = 101/159 (63.52%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           +KKS GR+KIE+ ++   +  QVTFSKRR GLF KA+EL  LCGAE+AI++FS   KV++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDALLDRFLTGNFLPP--------KPAEAYLPLPELNLDLCKAEAEFEIEKKR-- 120
           FGHPNVD+++DRF+  N LPP        +       + +LN  L +  ++ E EKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 AVERLRNSDRF---WWDEALERMRMDELKSFRSSLLQLR 147
            ++++R   +    WW++ +E + + +L+ F+ +L  L+
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of CSPI01G15670 vs. TAIR10
Match: AT2G24840.1 (AT2G24840.1 AGAMOUS-like 61)

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 65/159 (40.88%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           K+S GR+KI + ++ K + RQVTFSKRR GLF KA+EL  LCGAEI I++FS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDALLDRFLTGNFLPPKPAEAYLPLP----ELNLDLCKAEAEFEIEKKRA------ 121
           GHP+V+++LDR+++ N +    ++     P    ELN+ L    +E E EKK+       
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 -VERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANV 150
             E +R S   WW++ +E M M +L+  + +L +LR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of CSPI01G15670 vs. TAIR10
Match: AT2G34440.1 (AT2G34440.1 AGAMOUS-like 29)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 58/167 (34.73%), Postives = 97/167 (58.08%), Query Frame = 1


Query: 6   GRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTFGHPN 65
           GRRKI+++ +    TRQVTFSKRR GLF KA+EL+ LC AE+ I++FS  GK +++G PN
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VDALLDRFL-------------TGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEK-KRA 125
           +D++ +RF+             +GN+ P       L      LDL   E E E E+ +++
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYRPK------LKRLSERLDLLNQEVEAEKERGEKS 121

Query: 126 VERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRA 159
            E+L ++    + E++E + +DEL  ++  L  +   + G++  ++A
Sbjct: 122 QEKLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of CSPI01G15670 vs. TAIR10
Match: AT1G17310.1 (AT1G17310.1 MADS-box transcription factor family protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 63/175 (36.00%), Postives = 98/175 (56.00%), Query Frame = 1


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           K + GR+KIEIK++++ T RQVTFSKRR GLF K+AELS+L GA+IA++ FS   ++Y F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDRF 121
           GH  VDAL+D++L  +   P   E Y             +   + E +R           
Sbjct: 104 GH--VDALIDKYLRKS---PVKLEGY-----------SGDNAADEESRRP---------- 163

Query: 122 WWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGG 177
           WW+  +E +  +EL+ + ++L  LR N+  ++  +   R  D  + P+W I + G
Sbjct: 164 WWERPVESVPEEELEEYMAALSMLRENIGKKIVAMGNDRTVD--MVPAWPINVMG 190

[Close]

BLAST of CSPI01G15670 vs. TAIR10
Match: AT1G65360.1 (AT1G65360.1 AGAMOUS-like 23)

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-20
Identity = 56/135 (41.48%), Postives = 80/135 (59.26%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           +KK+ GRRK+EI ++ K +  QVTFSKR+ GLF KA+E   LC A+IA+++FS  GKV++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDALLDRF----LTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLR 120
           FGHPNVD LLD F    +  N      +   L +  LN    + +AE E E+K    R +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 N-----SDRFWWDEA 127
           N     +   WW ++
Sbjct: 122 NERENENAEEWWSKS 136

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: gi|449443690|ref|XP_004139610.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 2.5e-109
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNS+R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180
           FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180

Query: 181 AASFHVGENQSFAMDWEEEIWG 203
           AASFHVGENQSFAMDWEEEIWG
Sbjct: 181 AASFHVGENQSFAMDWEEEIWG 202

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: gi|659118116|ref|XP_008458954.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-74
Identity = 148/212 (69.81%), Postives = 168/212 (79.25%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKS GRRKIEIK+LDK +T+QVTFSKRR GLFNKAAELS+LCGAEIA+L+FSSRGK+YT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDALLDRFLTG-NFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSD 120
           FGHPNVDALLDRFLTG N +PPKPAEAYLP+ ELN DL KAEAEFEIEK+RA ER RNS+
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSI------- 180
           RFWWDE LE M++DELK FRSSL++LRANV  RLEKI       P +  + SI       
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180

Query: 181 --VLGGENQCAASFHVGENQSFAMDWEEEIWG 203
             +  G N C  SFH+ EN+S AMDWE EIWG
Sbjct: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 212

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: gi|659115872|ref|XP_008457781.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-52
Identity = 115/171 (67.25%), Postives = 138/171 (80.70%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKSSGR+KIEIK+L+  + RQVTFSKRR GLFNKAAELS+L GAEIAIL+FSS GK+YT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVD L+DRFLT NF+P KPAEAYLPL ELN DL  A AEFEIEK RA ER+RN+  
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA-ERMRNTGG 120

Query: 121 FWWDEA-LERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSW 171
           FWWDE  +E M ++ELK FRSSL++LR  VA ++E++ A+  E    +PS+
Sbjct: 121 FWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSF 170

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: gi|449463992|ref|XP_004149713.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-51
Identity = 109/160 (68.12%), Postives = 131/160 (81.88%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKS GR+KIEIK+L+  + RQVTFSKRR GLFNKAAELS+L GAEIAIL+FSS  K+YT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVD L+DRFLT NF+PPKP EAYLPL ELN DL    AEFE EK+RA ER+R +  
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRA-ERMRKTGG 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMR 161
           FWWDEA+E M +++LK FRSSL++LR  VA R+E++ A+R
Sbjct: 121 FWWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVR 159

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: gi|778686644|ref|XP_004147877.2| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 3.8e-49
Identity = 107/211 (50.71%), Postives = 144/211 (68.25%), Query Frame = 1


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKK+ GR+KIEIK+L+K +++QVTFSKRR GLF KA ELS+LCGAE+AI++FS   K++ 
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSD- 120
           FGHP+VD LLDR+LTGN  PPKPAE+Y+P+ E N D      EFE EKKRA E +R ++ 
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 120

Query: 121 -----RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDP---------- 180
                 FWW EA+E +R++ELK FRS+L+ LRA VA R+EK+ A+R+  P          
Sbjct: 121 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

Query: 181 PVTPSWSIVLGGENQC--AASFHVGENQSFA 194
           P+T S   ++G   +     +FH+  NQ  A
Sbjct: 181 PMTSSSFHLIGNHQELPPPTAFHLAGNQRVA 211

The following BLAST results are available for this feature:

BLAST of CSPI01G15670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL62_ARATH	5.1e-25	39.62	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1	[more]
AGL61_ARATH	3.6e-23	40.88	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1	[more]
AGL29_ARATH	1.9e-19	34.73	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1	[more]
AGL23_ARATH	5.4e-19	41.48	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1	[more]
AGL28_ARATH	2.1e-18	37.80	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1	[more]

BLAST of CSPI01G15670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW53_CUCSA	1.8e-109	99.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1	[more]
A0A0A0LLS2_CUCSA	1.7e-51	68.13	Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1	[more]
A0A0A0LE01_CUCSA	2.7e-49	50.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1	[more]
W9QW40_9ROSA	6.2e-30	43.60	Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002949 PE=4 SV=1	[more]
W9R6M2_9ROSA	1.2e-28	42.20	Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002953 PE=4 SV=1	[more]

BLAST of CSPI01G15670 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60440.1	2.8e-26	39.62	AGAMOUS-like 62	[more]
AT2G24840.1	2.0e-24	40.88	AGAMOUS-like 61	[more]
AT2G34440.1	1.0e-20	34.73	AGAMOUS-like 29	[more]
AT1G17310.1	1.0e-20	36.00	MADS-box transcription factor family protein	[more]
AT1G65360.1	3.0e-20	41.48	AGAMOUS-like 23	[more]

BLAST of CSPI01G15670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443690\|ref\|XP_004139610.1\|	2.5e-109	99.50	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]
gi\|659118116\|ref\|XP_008458954.1\|	2.0e-74	69.81	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
gi\|659115872\|ref\|XP_008457781.1\|	1.3e-52	67.25	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
gi\|449463992\|ref\|XP_004149713.1\|	2.4e-51	68.13	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]
gi\|778686644\|ref\|XP_004147877.2\|	3.8e-49	50.71	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G15670.1	CSPI01G15670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 7..27 score: 4.9E-22coord: 42..63 score: 4.9E-22coord: 27..42 score: 4.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 17..61 score: 1.2
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 score: 8.0
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 5..65 score: 27
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 6..75 score: 7.98
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 6..179 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G15670	Csa1G181400	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G15670	CsaV3_UNG063480	Cucumber (Chinese Long) v3	cpicucB060
CSPI01G15670	Cucsa.180570	Cucumber (Gy14) v1	cgycpiB286
CSPI01G15670	CsGy1G015390	Cucumber (Gy14) v2	cgybcpiB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G15670	Silver-seed gourd	carcpiB0055
CSPI01G15670	Silver-seed gourd	carcpiB0435
CSPI01G15670	Silver-seed gourd	carcpiB1074
CSPI01G15670	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G15670	Cucumber (Chinese Long) v3	cpicucB052
CSPI01G15670	Watermelon (97103) v2	cpiwmbB005
CSPI01G15670	Watermelon (97103) v2	cpiwmbB009
CSPI01G15670	Wax gourd	cpiwgoB036
CSPI01G15670	Wild cucumber (PI 183967)	cpicpiB039
CSPI01G15670	Cucumber (Gy14) v1	cgycpiB017
CSPI01G15670	Cucurbita maxima (Rimu)	cmacpiB212
CSPI01G15670	Cucurbita maxima (Rimu)	cmacpiB224
CSPI01G15670	Cucurbita maxima (Rimu)	cmacpiB403
CSPI01G15670	Cucurbita moschata (Rifu)	cmocpiB200
CSPI01G15670	Cucurbita moschata (Rifu)	cmocpiB211
CSPI01G15670	Cucurbita moschata (Rifu)	cmocpiB385
CSPI01G15670	Melon (DHL92) v3.5.1	cpimeB016
CSPI01G15670	Watermelon (Charleston Gray)	cpiwcgB022
CSPI01G15670	Watermelon (Charleston Gray)	cpiwcgB025
CSPI01G15670	Watermelon (97103) v1	cpiwmB050
CSPI01G15670	Watermelon (97103) v1	cpiwmB054
CSPI01G15670	Cucurbita pepo (Zucchini)	cpecpiB017
CSPI01G15670	Cucurbita pepo (Zucchini)	cpecpiB051
CSPI01G15670	Cucurbita pepo (Zucchini)	cpecpiB511
CSPI01G15670	Bottle gourd (USVL1VR-Ls)	cpilsiB019
CSPI01G15670	Bottle gourd (USVL1VR-Ls)	cpilsiB033
CSPI01G15670	Bottle gourd (USVL1VR-Ls)	cpilsiB038
CSPI01G15670	Melon (DHL92) v3.6.1	cpimedB025
CSPI01G15670	Cucumber (Gy14) v2	cgybcpiB249