CSPI01G15560 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G15560
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 11145759 .. 11146004 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCGAAAGCCTAGGCGAAGTGGTTCGGAGTCGTGCTCACAATGCAAGTCAGGTTGCCGATTGAACGTAGAGCGTCGTCGACTACAGAGCTGGGCGTTTGCGTGGGTGTGGGCTCCAGTCGTCGCTTGCCTTACGCCTGTAGTGCCGGAGTGTCGCCGGAGAAGTAGACTGAGGTATGGGGTTCGGGCGCTGTTTGATGAGAGGGGTGGAAGATGGACGTTTCCTTTTTTTCCCAAATCTTAA

mRNA sequence

ATGCTTCGAAAGCCTAGGCGAAGTGGTTCGGAGTCGTGCTCACAATGCAAGTCAGGTTGCCGATTGAACGTAGAGCGTCGTCGACTACAGAGCTGGGCGTTTGCGTGGGTGTGGGCTCCAGTCGTCGCTTGCCTTACGCCTGTAGTGCCGGAGTGTCGCCGGAGAAGTAGACTGAGGTATGGGGTTCGGGCGCTGTTTGATGAGAGGGGTGGAAGATGGACGTTTCCTTTTTTTCCCAAATCTTAA

Coding sequence (CDS)

ATGCTTCGAAAGCCTAGGCGAAGTGGTTCGGAGTCGTGCTCACAATGCAAGTCAGGTTGCCGATTGAACGTAGAGCGTCGTCGACTACAGAGCTGGGCGTTTGCGTGGGTGTGGGCTCCAGTCGTCGCTTGCCTTACGCCTGTAGTGCCGGAGTGTCGCCGGAGAAGTAGACTGAGGTATGGGGTTCGGGCGCTGTTTGATGAGAGGGGTGGAAGATGGACGTTTCCTTTTTTTCCCAAATCTTAA
Homology
[Close]
BLAST of CSPI01G15560 vs. TrEMBL
Match: A0A0A0LT13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181290 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.9e-42
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1   MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY 60
           MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY
Sbjct: 87  MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY 146

Query: 61  GVRALFDERGGRWTFPFFPKS 82
           GVRALFDERGGRWTFPFFPKS
Sbjct: 147 GVRALFDERGGRWTFPFFPKS 167

[Close]
BLAST of CSPI01G15560 vs. NCBI nr
Match: gi|700209919|gb|KGN65015.1| (hypothetical protein Csa_1G181290 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 4.1e-42
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1   MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY 60
           MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY
Sbjct: 87  MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY 146

Query: 61  GVRALFDERGGRWTFPFFPKS 82
           GVRALFDERGGRWTFPFFPKS
Sbjct: 147 GVRALFDERGGRWTFPFFPKS 167

The following BLAST results are available for this feature:
BLAST of CSPI01G15560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G15560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT13_CUCSA2.9e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181290 PE=4 SV=1[more]
BLAST of CSPI01G15560 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G15560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209919|gb|KGN65015.1|4.1e-42100.00hypothetical protein Csa_1G181290 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G15560.1CSPI01G15560.1mRNA