CSPI01G15150 (gene) Wild cucumber (PI 183967)

NameCSPI01G15150
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 10736302 .. 10736637 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGTCCACGAATTAGACAGGCTGATTAAGATTGAGAAAGGGTTGCTCTCGTTCAACCGTTCTCTACCTGACTTCCTATATGCTCCCATTAAAGTATTGAAGTGGGAAAAATTCTTCACGGACGAGACAAAGGTCAAGTTCGATGTAGTAGATCTACTTTATGTGACAAAGTTTCATCCAAAGGAATCATACGCGATAGTGGATGACAAGAGGGTTCCTTTCACGGAAGAAAAGAGCTCAATGAGTTGTATGGTTTACCTAATGATCTGGACACATACCCTAGCCATAGGCTCATCGCCTAACCCACAGAAAAAGATGCAAGTAGAACTATAA

mRNA sequence

ATGAGCGTCCACGAATTAGACAGGCTGATTAAGATTGAGAAAGGGTTGCTCTCGTTCAACCGTTCTCTACCTGACTTCCTATATGCTCCCATTAAAGTATTGAAGTGGGAAAAATTCTTCACGGACGAGACAAAGGTCAAGTTCGATGTAGTAGATCTACTTTATGTGACAAAGTTTCATCCAAAGGAATCATACGCGATAGTGGATGACAAGAGGGTTCCTTTCACGGAAGAAAAGAGCTCAATGAGTTGTATGGTTTACCTAATGATCTGGACACATACCCTAGCCATAGGCTCATCGCCTAACCCACAGAAAAAGATGCAAGTAGAACTATAA

Coding sequence (CDS)

ATGAGCGTCCACGAATTAGACAGGCTGATTAAGATTGAGAAAGGGTTGCTCTCGTTCAACCGTTCTCTACCTGACTTCCTATATGCTCCCATTAAAGTATTGAAGTGGGAAAAATTCTTCACGGACGAGACAAAGGTCAAGTTCGATGTAGTAGATCTACTTTATGTGACAAAGTTTCATCCAAAGGAATCATACGCGATAGTGGATGACAAGAGGGTTCCTTTCACGGAAGAAAAGAGCTCAATGAGTTGTATGGTTTACCTAATGATCTGGACACATACCCTAGCCATAGGCTCATCGCCTAACCCACAGAAAAAGATGCAAGTAGAACTATAA
BLAST of CSPI01G15150 vs. TrEMBL
Match: A0A0A0LT82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G169970 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 5.8e-54
Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 1

Query: 1   MSVHELDRLIKIEKGLLSFNRSLPDFLYAPIKVLKWEKFFTDETKVKFDVVDLLYVTKFH 60
           MSVHELDRLIKIEKGLLSFN SLPDFLYAPIK LKWEKFFTDETKVKFDVVDL Y TKFH
Sbjct: 1   MSVHELDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFH 60

Query: 61  PKESYAIVDDKRVPFTEEKSSMSCMVYLMIWTHTLAIGSSPNPQKKMQVEL 112
           PKESYAIVDD+RVPFT+EKSSMSCMVYLMIWTHTLAIGSSPNPQKKMQVEL
Sbjct: 61  PKESYAIVDDERVPFTKEKSSMSCMVYLMIWTHTLAIGSSPNPQKKMQVEL 111

BLAST of CSPI01G15150 vs. TrEMBL
Match: A0A0A0L9V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G283010 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-08
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1

Query: 13  EKGLLSFNRSLPDFLYAPIKVLKWEKFFTDETKVKFDVVDLLYVTKFHP 62
           +KGLLSFN  LPDFL+  IK LKWEK    E +VK D+V++ Y  KFHP
Sbjct: 128 KKGLLSFNGLLPDFLHRSIKALKWEKLLLSEARVKLDLVEMFYAVKFHP 176

BLAST of CSPI01G15150 vs. TrEMBL
Match: A0A0A0KXQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091900 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.7e-06
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 1

Query: 5   ELDRLIKIEKGLLSFNRSLPDFLYAPIKVLKWEKFFTDETKVKFDVVDLLYVTKFHPKES 64
           ELD+LIKIEKGLL F   LPDFL  PIK  KW+KFF  E +     V  +      P  S
Sbjct: 36  ELDKLIKIEKGLLPFKGPLPDFLPDPIKAFKWKKFFIVEGEKVPSTVKAISKLYDLPNGS 95

Query: 65  YAIVDDK 72
           YA  D +
Sbjct: 96  YAYPDQR 102

BLAST of CSPI01G15150 vs. NCBI nr
Match: gi|700209877|gb|KGN64973.1| (hypothetical protein Csa_1G169970 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 8.3e-54
Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 1

Query: 1   MSVHELDRLIKIEKGLLSFNRSLPDFLYAPIKVLKWEKFFTDETKVKFDVVDLLYVTKFH 60
           MSVHELDRLIKIEKGLLSFN SLPDFLYAPIK LKWEKFFTDETKVKFDVVDL Y TKFH
Sbjct: 1   MSVHELDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFH 60

Query: 61  PKESYAIVDDKRVPFTEEKSSMSCMVYLMIWTHTLAIGSSPNPQKKMQVEL 112
           PKESYAIVDD+RVPFT+EKSSMSCMVYLMIWTHTLAIGSSPNPQKKMQVEL
Sbjct: 61  PKESYAIVDDERVPFTKEKSSMSCMVYLMIWTHTLAIGSSPNPQKKMQVEL 111

BLAST of CSPI01G15150 vs. NCBI nr
Match: gi|700202631|gb|KGN57764.1| (hypothetical protein Csa_3G283010 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 3.1e-08
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1

Query: 13  EKGLLSFNRSLPDFLYAPIKVLKWEKFFTDETKVKFDVVDLLYVTKFHP 62
           +KGLLSFN  LPDFL+  IK LKWEK    E +VK D+V++ Y  KFHP
Sbjct: 128 KKGLLSFNGLLPDFLHRSIKALKWEKLLLSEARVKLDLVEMFYAVKFHP 176

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LT82_CUCSA5.8e-5494.59Uncharacterized protein OS=Cucumis sativus GN=Csa_1G169970 PE=4 SV=1[more]
A0A0A0L9V9_CUCSA2.2e-0859.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G283010 PE=4 SV=1[more]
A0A0A0KXQ2_CUCSA7.7e-0649.25Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700209877|gb|KGN64973.1|8.3e-5494.59hypothetical protein Csa_1G169970 [Cucumis sativus][more]
gi|700202631|gb|KGN57764.1|3.1e-0859.18hypothetical protein Csa_3G283010 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G15150.1CSPI01G15150.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G15150Csa1G169970Cucumber (Chinese Long) v2cpicuB000
CSPI01G15150CsaV3_1G015260Cucumber (Chinese Long) v3cpicucB001
The following gene(s) are paralogous to this gene:

None