CSPI01G15010 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G15010
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 10645002 .. 10645310 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATGACCAATAAGGTAAGATTTAAGACGGAAGAAGAGGGAGTCCTCTTCAAACAACTCTACAAGTTGCTTACAACGTGGATGAATCCAAAACTCCACCGTTATTTCCCTCCAACACAGAAGCTTGTCGCCATTGCAATGGCGCCAACAGAGCCATCAATTTCCGATCAGACTGTCCAGATATGCCTGACAACATACACGTTTTTCCGCCGCCTAATTCAACCCCCCACGCGTCATCCACATTCTTCAATCCTTCAAAATGCCTCAACCAAATCCCCCCCGACTTCAAACCCACGAACAAGATGA

mRNA sequence

ATGGGGATGACCAATAAGGTAAGATTTAAGACGGAAGAAGAGGGAGTCCTCTTCAAACAACTCTACAAGTTGCTTACAACGTGGATGAATCCAAAACTCCACCGTTATTTCCCTCCAACACAGAAGCTTGTCGCCATTGCAATGGCGCCAACAGAGCCATCAATTTCCGATCAGACTGTCCAGATATGCCTGACAACATACACGTTTTTCCGCCGCCTAATTCAACCCCCCACGCGTCATCCACATTCTTCAATCCTTCAAAATGCCTCAACCAAATCCCCCCCGACTTCAAACCCACGAACAAGATGA

Coding sequence (CDS)

ATGGGGATGACCAATAAGGTAAGATTTAAGACGGAAGAAGAGGGAGTCCTCTTCAAACAACTCTACAAGTTGCTTACAACGTGGATGAATCCAAAACTCCACCGTTATTTCCCTCCAACACAGAAGCTTGTCGCCATTGCAATGGCGCCAACAGAGCCATCAATTTCCGATCAGACTGTCCAGATATGCCTGACAACATACACGTTTTTCCGCCGCCTAATTCAACCCCCCACGCGTCATCCACATTCTTCAATCCTTCAAAATGCCTCAACCAAATCCCCCCCGACTTCAAACCCACGAACAAGATGA
Homology
[Close]
BLAST of CSPI01G15010 vs. TrEMBL
Match: A0A0A0LSS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168860 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 1 

Query: 1   MGMTNKVRFKTEEEGVLFKQLYKLLTTWMNPKLHRYFPPTQKLVAIAMAPTEPSISDQTV 60
           MGMTNKVRFKTEEEGVL KQLYKLLTTWMNPKLHRYFPPTQKLVAIAMAPTEPSISDQTV
Sbjct: 1   MGMTNKVRFKTEEEGVLVKQLYKLLTTWMNPKLHRYFPPTQKLVAIAMAPTEPSISDQTV 60

Query: 61  QICLTTYTFFRRLIQPPTRHPHSSILQNASTKSPPTSNPRTR 103
           QICLTTYTFFRRLIQPPTRHPHSSILQNASTKSPPTSNPRTR
Sbjct: 61  QICLTTYTFFRRLIQPPTRHPHSSILQNASTKSPPTSNPRTR 102

[Close]
BLAST of CSPI01G15010 vs. NCBI nr
Match: gi|700209864|gb|KGN64960.1| (hypothetical protein Csa_1G168860 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 1 

Query: 1   MGMTNKVRFKTEEEGVLFKQLYKLLTTWMNPKLHRYFPPTQKLVAIAMAPTEPSISDQTV 60
           MGMTNKVRFKTEEEGVL KQLYKLLTTWMNPKLHRYFPPTQKLVAIAMAPTEPSISDQTV
Sbjct: 1   MGMTNKVRFKTEEEGVLVKQLYKLLTTWMNPKLHRYFPPTQKLVAIAMAPTEPSISDQTV 60

Query: 61  QICLTTYTFFRRLIQPPTRHPHSSILQNASTKSPPTSNPRTR 103
           QICLTTYTFFRRLIQPPTRHPHSSILQNASTKSPPTSNPRTR
Sbjct: 61  QICLTTYTFFRRLIQPPTRHPHSSILQNASTKSPPTSNPRTR 102

The following BLAST results are available for this feature:
BLAST of CSPI01G15010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G15010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSS3_CUCSA2.1e-5099.02Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168860 PE=4 SV=1[more]
BLAST of CSPI01G15010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G15010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209864|gb|KGN64960.1|3.0e-5099.02hypothetical protein Csa_1G168860 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G15010.1CSPI01G15010.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G15010Csa1G168860Cucumber (Chinese Long) v2cpicuB000
CSPI01G15010CsaV3_1G015120Cucumber (Chinese Long) v3cpicucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G15010Cucurbita pepo (Zucchini)cpecpiB002
CSPI01G15010Cucurbita pepo (Zucchini)cpecpiB017
CSPI01G15010Bottle gourd (USVL1VR-Ls)cpilsiB006
CSPI01G15010Bottle gourd (USVL1VR-Ls)cpilsiB020
CSPI01G15010Bottle gourd (USVL1VR-Ls)cpilsiB033
CSPI01G15010Bottle gourd (USVL1VR-Ls)cpilsiB049
CSPI01G15010Melon (DHL92) v3.6.1cpimedB011
CSPI01G15010Melon (DHL92) v3.6.1cpimedB061
CSPI01G15010Melon (DHL92) v3.6.1cpimedB077
CSPI01G15010Cucumber (Gy14) v2cgybcpiB001
CSPI01G15010Silver-seed gourdcarcpiB0000
CSPI01G15010Silver-seed gourdcarcpiB1021
CSPI01G15010Cucumber (Chinese Long) v3cpicucB030
CSPI01G15010Watermelon (97103) v2cpiwmbB009
CSPI01G15010Watermelon (97103) v2cpiwmbB018
CSPI01G15010Watermelon (97103) v2cpiwmbB026
CSPI01G15010Wax gourdcpiwgoB049
CSPI01G15010Wild cucumber (PI 183967)cpicpiB015
CSPI01G15010Cucumber (Gy14) v1cgycpiB358
CSPI01G15010Cucumber (Gy14) v1cgycpiB482
CSPI01G15010Cucurbita maxima (Rimu)cmacpiB222
CSPI01G15010Cucurbita maxima (Rimu)cmacpiB403
CSPI01G15010Cucurbita moschata (Rifu)cmocpiB208
CSPI01G15010Cucurbita moschata (Rifu)cmocpiB386
CSPI01G15010Cucurbita moschata (Rifu)cmocpiB810
CSPI01G15010Melon (DHL92) v3.5.1cpimeB017
CSPI01G15010Melon (DHL92) v3.5.1cpimeB030
CSPI01G15010Melon (DHL92) v3.5.1cpimeB067
CSPI01G15010Watermelon (Charleston Gray)cpiwcgB031
CSPI01G15010Watermelon (Charleston Gray)cpiwcgB025
CSPI01G15010Watermelon (97103) v1cpiwmB008
CSPI01G15010Watermelon (97103) v1cpiwmB044
CSPI01G15010Watermelon (97103) v1cpiwmB070