CSPI01G13800 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G13800
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 9384516 .. 9390637 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAGAAGCACCTCAAGGAAGAAGAATCAATGGAGGAAAGATGATATTATACTCCTTTTCTCTTACTTTTCTCAATTCTATCTATTAGATCAGCTCTCCAGCCAAGTTGCGTCAAGTATTTGAAAATACACCAGCTCTAATAGACATTGTCAAGTGGCTCATTTTTCTCCAGCCAAGTTGCCTCTTCAAAAATGCAATAAGCGCTCCGGTTTAAATAGACAATCTCAAGTGTGTGGCAAGATTGACTGAATGTATTATACTTACTATGTCCTCAAACAACATAGGCATTCACTCTCAAGCCTTCTCGTCAATTTACTCGTCCACTAATGTATGTCAATTTGATAGGTTCTTGTATTGTTTATACCATTGTGGGTGGACTTCTTTCTTTTGCGTTTGCTTCCTCCCTACCTTTATTTTTTGTCTCTTCTCTTTTATCTTTTCATAATCATTTTCTCAAATAAGAGAAAGATAAACAATATACACTTATTCAACTCCATGTCTTTTCAATCACTCTTCTTGTTCATTTCGTGAGCCAATTTGTTAGATCCAAGTTTTTGAGCTATTGATTTTTTTTTTTACTTTCGACTAAATTTAGAATTTGTTTGCATGATATTTGTGGGAATAATGTGAGCCTTGGTCATTTGCTATACTGATACGAGCTTCAAGGGAGTGTGCTTATCAAGCATGGGAAAGGCAGTATCAAGTTTGTGGCGTAGAAAGTTTAGAATGAAGAAGAAAAGGCTCACTGTATTTTGAAGAAGTCTAGGTCTTTAGTTTGAAACACTTAGAAAGTACAAAAATAGGCGAAATTAATTTGCTTATTGAGAAGGAGATGTCTATATGTAAATTGCTTATCAAGAAAAAGTTTTGCATCAAATTTGGGATGTTATCTGAATTCTAAAAGAAAGAAAGAATGAAAAAACAACCAGACCCGATATTTTTAACCCAACCCGAATTCAGGTGGGTCAAACTATCAGCAGTAAGACGACCCAGTGTTCCATATTTATCAAGGGATCATTTACCATTTTAATGATAACCATCTTCTCAACAAAATGAACATACATTTATCTACACTGAAATATATTTCCCACCTTATTTCAATAATTCCACTACCATATAGTTCCTTGCAACAAAAGAAAATCGATAGGGGAAACATAGTCACCGATGAAGGAAAAAAAAGATTAAATACTGGGAAGCATCTTTTGAAACCAACTAGGTCATTTTGTATCATGTTATAAGAAAGACTACTCTTAACCACGTTTGGCTTGAAACACACTTTCAAATTGAAAATTTTAAGTACATAACTTTCTCCATCAAATTTATTACGAAACTTCGCACTTATTTAAAGTTCAGTGTTTGGTTCTTAAAATTAATGAAAACAAACATTATTTCATGTTCGAAAGACACTAACGTTAGCTTGTATTAAAAGAAAGATAAGAGCACCCTTGCTGAATACTATTATCCAAAGTGATGTCAATGAGAATTTGGAAGGTTACATTCTTCACCTTATCCTTGCAGGTTGCACCTAGTGAAATGGTGGGAAAGTGGATCTTCACAATTGATCTGAAGAAAGCTAGGAGTACATAGAATTCTCTAGACTTTAAAATACTTAAGATCTTCAAGTTTAAGACGAGAAAACTAGATAGTTTAACACAATATAGGACTCCAAATCTTATTATTCCTCGTTTCCTTCGCAATAGTATACATGACAGGGACTTTATACCATCCTACGTCTACAAGGTAGGTTTATACAGTTTTTTCCTATCAGTTCGTAAGACCTTCCATTTAACATACTTACGAAGGGGTAAAAACAACCCTTCAAAGCTACTAGAGAAAATTAAGACACGAAGTCAGTTATTGAGAGTGAAAATCGTTGATAAGGTAAGGGTTTTCAAACGACAGACGAGGCAGAGATGTTTTAGGGTTAAACCATCAAACGAGATGGGAGTTTTCTTCTTGTTTCTCATCTTGTCTTAGCAGTTTCATAGAACTCTTGAATCATTACATTTCACAAACTCAATATAATCGTTCCCTATTTTGGACATATTTTTATAGTTTCTTCCTACTAATATTGGCTCTAGTGGCTAAAAAGAATATCTCACCCACAAAGATCCAAGAGAATAAGGTTAGAGATGATTTTATAATGGCTAAAAAAATTCAATGTTATAACTGCACATTAATCATTTTCAAGTTTGAATTTTCCACAAGTAAAAATAGAGGAGACTGGTCATTTCACATACGCTCTGTGTATATATGACAAGGGGAGAATCTTCCAACTAGAGATAACTCAATTGAATGCTTAACGACACTGAGAAGCAAAAAAAATGTGTTCCTCACTTGTCTATCTTTAATGGTGTAATTTCATTAGAAAAACTGAAGTTCGACTATCAATATGCGCATTAACAAGTTCCAATACGAAGGATTTATGGAATTTCGTTACTATGCCCATCTGATTAAGTAGGTTTTGAAGATCAGGAACTTCAAAAAGCTTTGCTGCAGATTTTGACAATTAGGAGCTTCAAATAACTTAAATGTAATCACTCAACTTATTCTAGTATTTATTTACTTCTAAATCCAATTTTTGTAACATCAAAATTGGTTTTGACCGATCAAAAGTGTAAATCAAAAGTATTTTAGAAAATGACAAAAGTAATTCAAACCAATTCAAAATCTGCCAAATGCAGTCTTCTTTAGACCTATTAAAGTAAAATAGCTGAGTCTAGACCAAACACAAGAGGAGAGGCCTCAAAATGTGATGCTCTAATATTTGAGCTACATATAGGGATATAGTTCAAATACCTCTCATCTCAACGAACACGTGGAAGGAAATTCTTTCTAGAATAGGAAAAAGTAGATGCAATCTAGTGTTCATCCTTTAAACTTCAATATAGTCATCAATGATGCACGGAATGGTACCACAAAACTTGAAAGATAATAAATCGAAAGGAAATGAGACTTTCAGCTTCTTACTTGATTAAAAGGTTTAGTATCAACCAATAAGAGAAGGACAAGAGAATGTAAAGGACCATACAAAACTTCATTACCAAATCAAACTATGTGATCATAGTAAACGATGACCTGTATCTGTGAGAAGCTCAAGACAAAATTTTATCATACAACTTGGAGTTGTGAAGTTCAAATGCAAAGTTGAATTGACTTGTGGATGTGGCTAAACTTTCTTGATAAGAATTTGATTGCAAGCTAAAGAAGAAAAGTGGACTACTGAAGTATTTAATGCCTTCATTGCTTTTTCCAAGAAGAAAAGGCTAATAATGTTAAGTTTACCCATAGTTTCTATAGAAGACAAGTTGAAGACAACTTTTTCGTACTTCAATAAGGAGATTTAATTTTTCTTTTCTTTTCCTTTCTTCTTTTTGTTCAACGAAGTTTGAGGCATTGATTTGCTTCCACAATATTTGTTTTTTTACATCAATTTTATTTATCTTAACAGTGTATCACAGAGCTACCTTGAATTTTCCAATCTCATTAGTTCGAGTTGAAGCAGCTTTATTAAAGGAATTGTTAGTTTGGGCTGGGAGCAATTTTGAGCGATTTTTTCTGGTAGTAAAATAAAACTTTTGGTTTGTTGGCAATTAGTACAAGGTGGTCTTGGTATTGGACCAATCAGTACAAACATATGAATTTGGTTCTAATCGGTCAAACAAATTTAACAGGCACACTAAGAGCAATTAGCATTCGAGTCTGGGTTAATATATCTACAATTTCAAAGATGTTTGTGTTGATAGTTGCAGTTCATGTCTGTAACGGCAGACACATTATGTTCTGGAAGAAACCTTCATCAAATCAGATAAACGATTTCATGAAACTTGGATTTCTGATGACCTTCGCAGAAGTTAAACTTTCAAGTGTCCCTCTTAGGCTTAATCTGGATATCTATGAAAGCTTTGACAGCTGAAGGGACATGAAGCACTATATGGAAATATGTGAACTAGAGTGATAAATAGATTTCCTTGGGTAATCGAAAAGAGAGAAAGATAACACAAAACAATTTCTACAACAAGAATAAGAGTGGGTCAGTGGCACCGATCACGTTACTACAGCCATTGCATATACCAAATCAGGCTGGGAGGACATGCTCGTGACTGAAGGTTTACCAAAATCAAAGGTACAATGATGGTTGTGAATAGATTGAGCAAATACGGACATTTTATTCCTTTGAGTCATCCATATGGGGCTAAGAGTGGTGAAAGTCCTCATTACTAAAATTGTACAATTACATGGATTTTTTAGGACCATAATTTTCTTTTCTAGAAACAAGATTTTTGGTAGTAGTCTTTTTGGTGGAATTTTGTTTCTTCCATGGCACTGTACCCAAGAGAAGCACAGCCTTCCATCAAATAGATGGACAGATATACAGGGCAAATCGTTGTGTCGAGTCGTATTTCAGATGCTACTACATTGAGTAACAAAAACAGTGGAGAATATTGGTACAACACTGCTTCACATATTTTAATTAAAACACCTCCATTCAACATAATGCACACCCATCCAGCTCGAGCGACAATTTCATACGAGGATGGAAAAACTTCTAGTGATAGATTGAAAAGCATAATGGATTAAACGAGACTGAGCCTTCGTGGCTTTGTATAAGGCATACACAACATGCTGGAAAAGGTGGGAGCTGTTGCCTAAAAGCTGGACTTTCCTATAAGTCATCCTCTTAATGTTCAATGGTACCTAAAAGCTGTGTCAGGACGCTGAACTATGAGATGATATAGAGAGCGAGGCTATTTGCAAGTTGTAGGCTGAGTTGAAGCAACAATTTCCATCCCTTGACCTTGACTAAAAAGTGAACTAATACCTAGGAGGGAATGAGAGGCCCACAAATATACACACATATAAGGAAGAAGTAGAAGGGGAATTTCAAATGAGGAAAATCGTCCAAGTGGAGTTTTATTAACTAGTTGAGACCATTTAGAAGAGGGGTTTATTAAAAGTGGTCTTCTGTTGAAGGGAGGGCATCGAATTTGCAATCAATACTGGCTTGGGGGACAGGAATTCCAGCCCTCCAGAGTTAGGGTGTACTAGGGTTCTTAATGGGTTTTTTGTTTATCCTTCTTGTTGATTTGATGGAGATTTATTAACAGTTTACAGGTGAAAGACTCCCCACCATTTCATTGCTACTGCTAACCCTTGCGGGTTCTTTAGGCTCTAACCAATTGAAAATTCAAACAAAACCTATCATTCATTAGGGTTCTTCAGGCACAGGAAGATTGTGGCATAAACAACTTTGTGTGTTCAATCTAAATAGCTTGTAAACTTGTTTTGTGTCAGAGTCTATATTCCTTTTTAAATCATGGGTTCTTCTGGCTCTTGTTTTACTTCTCTCTCATGCCTCTTGTTTTGTTTCTCTTCTTCGAGCCATTGAAGAGCCCAAAAATCTTCTACCTTTTCATCAACCTATTTAAAAATTGTTTCTATGACACATATATCAAAGTAAAAGCTCTAGAAAGATTGAAACTTGCAAATTTTAAGAGAAAAAATTGGCAATCGAACAGTACAATCCAAAACAAGTATGATTTTACTTCTCCTACAACATAAGACCAATCAAAACACTTCAGATCTCTGGCATGTAACATGAAGGAGAAAGGCTAACAACAGTACTATTACTACAAGATGCAAGTTGTCTGATGTGAAGATTTCCATGGGAATTTCAAAACATGGTTCAAGTAAAAGAAGGAAAACAGAGAAGCTAAGCAACAGGAACTTCAAAGCATATTTAAGTTGTGTTGTGAAATTTAGAGGAGAACGAATTTAAGGAGCATTCAACTTAATATACTCACAGCATGTATTATAAGTGGGAATATAAGGTGAAAGGGCATAACAATTCAGTGTTAATTTCATCTCATAGACCTTGATCCAAAATGAGTTGACTGCTCAGAACTTTTGTGGAGAAGGAGAATGATGCACAGGATATCAATGCATCCTATGACCATGAATATCTCTGTAAGCCTGGAAGCAAGGATTAAGGCTAGGATACTTAAATGACCATAAAGAAGCTACCTAGACGTCTTAGAAAGGACACTGAAAAAGAGAGAAATTGACTGAAAACCCTGTAAAAGGATCGATGAAAGAGTAGTTCCAAAACAGTGACAAATAGT

mRNA sequence

ATGAATTTGGTTCTAATCGGTCAAACAAATTTAACAGGCACACTAAGAGCAATTAGCATTCGAGTCTGGGTTAATATATCTACAATTTCAAAGATGTTTGTGTTGATAGTTGCAGTTCATGTCTGTAACGGCAGACACATTATGTTCTGGAAGAAACCTTCATCAAATCAGATAAACGATTTCATGAAACTTGGATTTCTGATGACCTTCGCAGAAGTTAAACTTTCAAGTGTCCCTCTTAGGCTTAATCTGGATATCTATGAAAGCTTTGACAGCTGA

Coding sequence (CDS)

ATGAATTTGGTTCTAATCGGTCAAACAAATTTAACAGGCACACTAAGAGCAATTAGCATTCGAGTCTGGGTTAATATATCTACAATTTCAAAGATGTTTGTGTTGATAGTTGCAGTTCATGTCTGTAACGGCAGACACATTATGTTCTGGAAGAAACCTTCATCAAATCAGATAAACGATTTCATGAAACTTGGATTTCTGATGACCTTCGCAGAAGTTAAACTTTCAAGTGTCCCTCTTAGGCTTAATCTGGATATCTATGAAAGCTTTGACAGCTGA
Homology
[Close]
BLAST of CSPI01G13800 vs. TrEMBL
Match: A0A0A0LXX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G126030 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.2e-42
Identity = 88/91 (96.70%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLIVAVHVCNGRHIMFWKKPSSNQIND 60
          MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVL+VAVHVCNGRHIMFWKKPSSNQIN+
Sbjct: 1  MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINN 60

Query: 61 FMKLGFLMTFAEVKLSSVPLRLNLDIYESFD 92
          FMKLGFLMTFAEVKLSSVP+RLNLDIYESFD
Sbjct: 61 FMKLGFLMTFAEVKLSSVPIRLNLDIYESFD 91

[Close]
BLAST of CSPI01G13800 vs. NCBI nr
Match: gi|700209745|gb|KGN64841.1| (hypothetical protein Csa_1G126030 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.0e-41
Identity = 88/91 (96.70%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLIVAVHVCNGRHIMFWKKPSSNQIND 60
          MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVL+VAVHVCNGRHIMFWKKPSSNQIN+
Sbjct: 1  MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINN 60

Query: 61 FMKLGFLMTFAEVKLSSVPLRLNLDIYESFD 92
          FMKLGFLMTFAEVKLSSVP+RLNLDIYESFD
Sbjct: 61 FMKLGFLMTFAEVKLSSVPIRLNLDIYESFD 91

The following BLAST results are available for this feature:
BLAST of CSPI01G13800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G13800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXX9_CUCSA7.2e-4296.70Uncharacterized protein OS=Cucumis sativus GN=Csa_1G126030 PE=4 SV=1[more]
BLAST of CSPI01G13800 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G13800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209745|gb|KGN64841.1|1.0e-4196.70hypothetical protein Csa_1G126030 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G13800.1CSPI01G13800.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G13800Csa1G126030Cucumber (Chinese Long) v2cpicuB000
CSPI01G13800CsaV3_1G014000Cucumber (Chinese Long) v3cpicucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G13800Cucurbita maxima (Rimu)cmacpiB205
CSPI01G13800Cucurbita moschata (Rifu)cmocpiB192
CSPI01G13800Melon (DHL92) v3.5.1cpimeB011
CSPI01G13800Watermelon (Charleston Gray)cpiwcgB017
CSPI01G13800Watermelon (97103) v1cpiwmB057
CSPI01G13800Cucurbita pepo (Zucchini)cpecpiB518
CSPI01G13800Bottle gourd (USVL1VR-Ls)cpilsiB046
CSPI01G13800Melon (DHL92) v3.6.1cpimedB011
CSPI01G13800Cucumber (Gy14) v2cgybcpiB001
CSPI01G13800Silver-seed gourdcarcpiB0192
CSPI01G13800Watermelon (97103) v2cpiwmbB002
CSPI01G13800Wax gourdcpiwgoB017
CSPI01G13800Wax gourdcpiwgoB049
CSPI01G13800Cucumber (Gy14) v1cgycpiB326