CSPI01G13320 (gene) Wild cucumber (PI 183967)

NameCSPI01G13320
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 8788844 .. 8789134 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA

mRNA sequence

ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA

Coding sequence (CDS)

ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA
BLAST of CSPI01G13320 vs. TrEMBL
Match: A0A0A0LUY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G108290 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-48
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1

Query: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60
          MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL
Sbjct: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60

Query: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 97
          PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC
Sbjct: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 96

BLAST of CSPI01G13320 vs. NCBI nr
Match: gi|700209708|gb|KGN64804.1| (hypothetical protein Csa_1G108290 [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-48
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1

Query: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60
          MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL
Sbjct: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60

Query: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 97
          PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC
Sbjct: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LUY9_CUCSA1.1e-48100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G108290 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700209708|gb|KGN64804.1|1.6e-48100.00hypothetical protein Csa_1G108290 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G13320.1CSPI01G13320.1mRNA