Csa1G108290 (gene) Cucumber (Chinese Long) v2

NameCsa1G108290
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 8755080 .. 8755370 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA

mRNA sequence

ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA

Coding sequence (CDS)

ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA

Protein sequence

MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLLPVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC*
BLAST of Csa1G108290 vs. TrEMBL
Match: A0A0A0LUY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G108290 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-49
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1

Query: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60
          MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL
Sbjct: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60

Query: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 97
          PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC
Sbjct: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 96

BLAST of Csa1G108290 vs. NCBI nr
Match: gi|700209708|gb|KGN64804.1| (hypothetical protein Csa_1G108290 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 4.1e-49
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1

Query: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60
          MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL
Sbjct: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60

Query: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 97
          PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC
Sbjct: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LUY9_CUCSA2.9e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G108290 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209708|gb|KGN64804.1|4.1e-49100.00hypothetical protein Csa_1G108290 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G108290.1Csa1G108290.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G108290CSPI01G13320Wild cucumber (PI 183967)cpicuB000
The following gene(s) are paralogous to this gene:

None