CSPI01G11870 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGGTGTGACGATCCGAACCACAAAGGTCAGAACATGGGAATCTTCTACTCCGCCGCAAGAGACCCAATTTTCTACACCCATCACGCCAACGTCGATCGCTGTAGTCAATCTGGAAGTCCATCAACTGAAGGCGCAAAGACATTCTGACCCCGATTTCCTCAACACTTCCTTACTCTTCTACAACGAGAAAGCTGAACCCGTCTGTGTCTACGTTCGTGACTTTCTTGACTCTCTTGACACTAAAAAACTCGGCTACGTCTTCCAATCTATTGACATCCCATGGCTCAAATCTCGCCCCAAGCCTCTTAACAAGAAGGTCAAGTCCAAGAAGTCTATTGCTGCTAGCATTGTCCCATTCGGTGTTGGTGCAGCCCTTGATGAAAAAGCAAAGTCGATACACTTAAGAATAAAAATGCTTTGTAGAAGGAGGAATAATTGGCAAGAGAAAATCCTAACTTTTTATATATATGACTCCATGGTTTTTTGA ATGCTTGGTGTGACGATCCGAACCACAAAGGTCAGAACATGGGAATCTTCTACTCCGCCGCAAGAGACCCAATTTTCTACACCCATCACGCCAACGTCGATCGCTGTAGTCAATCTGGAAGTCCATCAACTGAAGGCGCAAAGACATTCTGACCCCGATTTCCTCAACACTTCCTTACTCTTCTACAACGAGAAAGCTGAACCCGTCTGTGTCTACGTTCGTGACTTTCTTGACTCTCTTGACACTAAAAAACTCGGCTACGTCTTCCAATCTATTGACATCCCATGGCTCAAATCTCGCCCCAAGCCTCTTAACAAGAAGGTCAAGTCCAAGAAGTCTATTGCTGCTAGCATTGTCCCATTCGGTGTTGGTGCAGCCCTTGATGAAAAAGCAAAGTCGATACACTTAAGAATAAAAATGCTTTGTAGAAGGAGGAATAATTGGCAAGAGAAAATCCTAACTTTTTATATATATGACTCCATGGTTTTTTGA ATGCTTGGTGTGACGATCCGAACCACAAAGGTCAGAACATGGGAATCTTCTACTCCGCCGCAAGAGACCCAATTTTCTACACCCATCACGCCAACGTCGATCGCTGTAGTCAATCTGGAAGTCCATCAACTGAAGGCGCAAAGACATTCTGACCCCGATTTCCTCAACACTTCCTTACTCTTCTACAACGAGAAAGCTGAACCCGTCTGTGTCTACGTTCGTGACTTTCTTGACTCTCTTGACACTAAAAAACTCGGCTACGTCTTCCAATCTATTGACATCCCATGGCTCAAATCTCGCCCCAAGCCTCTTAACAAGAAGGTCAAGTCCAAGAAGTCTATTGCTGCTAGCATTGTCCCATTCGGTGTTGGTGCAGCCCTTGATGAAAAAGCAAAGTCGATACACTTAAGAATAAAAATGCTTTGTAGAAGGAGGAATAATTGGCAAGAGAAAATCCTAACTTTTTATATATATGACTCCATGGTTTTTTGA
BLAST of CSPI01G11870 vs. Swiss-Prot
Match: AS1_ANTMA (Aureusidin synthase OS=Antirrhinum majus GN=AS1 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.5e-11 Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 1
BLAST of CSPI01G11870 vs. Swiss-Prot
Match: PPO_MALDO (Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.8e-11 Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 1
BLAST of CSPI01G11870 vs. Swiss-Prot
Match: LAHY_LARTR ((+)-larreatricin hydroxylase, chloroplastic OS=Larrea tridentata PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
BLAST of CSPI01G11870 vs. Swiss-Prot
Match: PPO1_IPOBA (Polyphenol oxidase I, chloroplastic OS=Ipomoea batatas GN=co-1 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08 Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 1
BLAST of CSPI01G11870 vs. Swiss-Prot
Match: PPO_VICFA (Polyphenol oxidase A1, chloroplastic OS=Vicia faba PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.0e-07 Identity = 28/65 (43.08%), Postives = 38/65 (58.46%), Query Frame = 1
BLAST of CSPI01G11870 vs. TrEMBL
Match: A0A0A0LSA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073610 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 6.0e-84 Identity = 160/163 (98.16%), Postives = 160/163 (98.16%), Query Frame = 1
BLAST of CSPI01G11870 vs. TrEMBL
Match: A0A0A0LUI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073620 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.2e-19 Identity = 66/126 (52.38%), Postives = 77/126 (61.11%), Query Frame = 1
BLAST of CSPI01G11870 vs. TrEMBL
Match: A0A0U2D7M5_LUFAE (Polyphenol oxidase OS=Luffa aegyptiaca PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.4e-18 Identity = 51/85 (60.00%), Postives = 58/85 (68.24%), Query Frame = 1
BLAST of CSPI01G11870 vs. TrEMBL
Match: A0A151R8K1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_039853 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 6.2e-12 Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = 1
BLAST of CSPI01G11870 vs. TrEMBL
Match: A0A023GU59_LITCN (Polyphenol oxidase OS=Litchi chinensis PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.2e-11 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 1
BLAST of CSPI01G11870 vs. NCBI nr
Match: gi|700209557|gb|KGN64653.1| (hypothetical protein Csa_1G073610 [Cucumis sativus]) HSP 1 Score: 318.2 bits (814), Expect = 8.7e-84 Identity = 160/163 (98.16%), Postives = 160/163 (98.16%), Query Frame = 1
BLAST of CSPI01G11870 vs. NCBI nr
Match: gi|700209558|gb|KGN64654.1| (hypothetical protein Csa_1G073620 [Cucumis sativus]) HSP 1 Score: 102.4 bits (254), Expect = 7.5e-19 Identity = 66/126 (52.38%), Postives = 77/126 (61.11%), Query Frame = 1
BLAST of CSPI01G11870 vs. NCBI nr
Match: gi|844289600|gb|AKN08990.1| (polyphenol oxidase [Luffa aegyptiaca]) HSP 1 Score: 99.8 bits (247), Expect = 4.8e-18 Identity = 51/85 (60.00%), Postives = 58/85 (68.24%), Query Frame = 1
BLAST of CSPI01G11870 vs. NCBI nr
Match: gi|1012327131|gb|KYP38872.1| (hypothetical protein KK1_039853 [Cajanus cajan]) HSP 1 Score: 79.0 bits (193), Expect = 8.8e-12 Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = 1
BLAST of CSPI01G11870 vs. NCBI nr
Match: gi|1009169964|ref|XP_015865948.1| (PREDICTED: polyphenol oxidase, chloroplastic-like [Ziziphus jujuba]) HSP 1 Score: 76.6 bits (187), Expect = 4.4e-11 Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |