CSPI01G02810 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G02810
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 1781141 .. 1781489 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAGAGTGACACCAACAAAACTGAACAGATGAACGAGAATGGCACCAACAAAGATCGTGTGCGATACAAAACGTGTGAGATGGAAGGGAGCAAAATGGTCGCTTTTTCACACGTGTGAGTACATTTTGGTAATTACACGTCAACTATGAGTTATTCCACGTATTTAAAAAAGTAAGGGATGATTTCACATATTTATAATTTTGAGGTCTAACCATCAGGTGGACTCAGTAAATTTGAGCGCGAATCCAACCGAACCCCCATCAAAGCGCCATATTAAAGTCTCTCCGGTTGGCGGCAACTCATCGCCGGCGTCTTCCACCTTCCGAGTCTTGCGGCAACACTGA

mRNA sequence

ATGGACGAGAGTGACACCAACAAAACTGAACAGATGAACGAGAATGGCACCAACAAAGATCGTGTGCGATACAAAACGTGTGAGATGGAAGGGAGCAAAATGGTGGACTCAGTAAATTTGAGCGCGAATCCAACCGAACCCCCATCAAAGCGCCATATTAAAGTCTCTCCGGTTGGCGGCAACTCATCGCCGGCGTCTTCCACCTTCCGAGTCTTGCGGCAACACTGA

Coding sequence (CDS)

ATGGACGAGAGTGACACCAACAAAACTGAACAGATGAACGAGAATGGCACCAACAAAGATCGTGTGCGATACAAAACGTGTGAGATGGAAGGGAGCAAAATGGTGGACTCAGTAAATTTGAGCGCGAATCCAACCGAACCCCCATCAAAGCGCCATATTAAAGTCTCTCCGGTTGGCGGCAACTCATCGCCGGCGTCTTCCACCTTCCGAGTCTTGCGGCAACACTGA
Homology
[Close]
BLAST of CSPI01G02810 vs. TrEMBL
Match: A0A0A0LUM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013200 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-30
Identity = 73/82 (89.02%), Postives = 75/82 (91.46%), Query Frame = 1 

Query: 1  MDESDTNKTEQMNENGTNKDRVRYKTCEMEGSKMV-------DSVNLSANPTEPPSKRHI 60
          MD+SDTNKTEQMNENGTNKDRVRY+TCEMEGSKMV       DSVNLSANPTEPPSKRHI
Sbjct: 1  MDKSDTNKTEQMNENGTNKDRVRYQTCEMEGSKMVAFSHVRVDSVNLSANPTEPPSKRHI 60

Query: 61 KVSPVGGNSSPASSTFRVLRQH 76
          KVSPVGGNSSPASSTFRVLRQH
Sbjct: 61 KVSPVGGNSSPASSTFRVLRQH 82

[Close]
BLAST of CSPI01G02810 vs. NCBI nr
Match: gi|700208625|gb|KGN63721.1| (hypothetical protein Csa_1G013200 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-30
Identity = 73/82 (89.02%), Postives = 75/82 (91.46%), Query Frame = 1 

Query: 1  MDESDTNKTEQMNENGTNKDRVRYKTCEMEGSKMV-------DSVNLSANPTEPPSKRHI 60
          MD+SDTNKTEQMNENGTNKDRVRY+TCEMEGSKMV       DSVNLSANPTEPPSKRHI
Sbjct: 1  MDKSDTNKTEQMNENGTNKDRVRYQTCEMEGSKMVAFSHVRVDSVNLSANPTEPPSKRHI 60

Query: 61 KVSPVGGNSSPASSTFRVLRQH 76
          KVSPVGGNSSPASSTFRVLRQH
Sbjct: 61 KVSPVGGNSSPASSTFRVLRQH 82

The following BLAST results are available for this feature:
BLAST of CSPI01G02810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G02810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUM7_CUCSA1.4e-3089.02Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013200 PE=4 SV=1[more]
BLAST of CSPI01G02810 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G02810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208625|gb|KGN63721.1|2.0e-3089.02hypothetical protein Csa_1G013200 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G02810.1CSPI01G02810.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G02810Csa1G013200Cucumber (Chinese Long) v2cpicuB000
CSPI01G02810CsaV3_1G002850Cucumber (Chinese Long) v3cpicucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G02810Wild cucumber (PI 183967)cpicpiB000
CSPI01G02810Wild cucumber (PI 183967)cpicpiB029
CSPI01G02810Cucumber (Gy14) v1cgycpiB138
CSPI01G02810Cucumber (Gy14) v1cgycpiB310
CSPI01G02810Cucumber (Gy14) v1cgycpiB427
CSPI01G02810Cucurbita maxima (Rimu)cmacpiB086
CSPI01G02810Cucurbita maxima (Rimu)cmacpiB226
CSPI01G02810Cucurbita maxima (Rimu)cmacpiB693
CSPI01G02810Cucurbita moschata (Rifu)cmocpiB079
CSPI01G02810Cucurbita moschata (Rifu)cmocpiB212
CSPI01G02810Cucumber (Chinese Long) v2cpicuB005
CSPI01G02810Cucumber (Chinese Long) v2cpicuB037
CSPI01G02810Melon (DHL92) v3.5.1cpimeB005
CSPI01G02810Melon (DHL92) v3.5.1cpimeB055
CSPI01G02810Melon (DHL92) v3.5.1cpimeB026
CSPI01G02810Watermelon (Charleston Gray)cpiwcgB060
CSPI01G02810Watermelon (Charleston Gray)cpiwcgB066
CSPI01G02810Watermelon (Charleston Gray)cpiwcgB083
CSPI01G02810Watermelon (97103) v1cpiwmB039
CSPI01G02810Watermelon (97103) v1cpiwmB067
CSPI01G02810Watermelon (97103) v1cpiwmB099
CSPI01G02810Cucurbita pepo (Zucchini)cpecpiB512
CSPI01G02810Cucurbita pepo (Zucchini)cpecpiB656
CSPI01G02810Bottle gourd (USVL1VR-Ls)cpilsiB024
CSPI01G02810Bottle gourd (USVL1VR-Ls)cpilsiB055
CSPI01G02810Bottle gourd (USVL1VR-Ls)cpilsiB070
CSPI01G02810Melon (DHL92) v3.6.1cpimedB005
CSPI01G02810Melon (DHL92) v3.6.1cpimedB028
CSPI01G02810Melon (DHL92) v3.6.1cpimedB049
CSPI01G02810Cucumber (Gy14) v2cgybcpiB001
CSPI01G02810Cucumber (Gy14) v2cgybcpiB004
CSPI01G02810Silver-seed gourdcarcpiB0420
CSPI01G02810Silver-seed gourdcarcpiB0628
CSPI01G02810Cucumber (Chinese Long) v3cpicucB003
CSPI01G02810Cucumber (Chinese Long) v3cpicucB044
CSPI01G02810Watermelon (97103) v2cpiwmbB056
CSPI01G02810Watermelon (97103) v2cpiwmbB063
CSPI01G02810Watermelon (97103) v2cpiwmbB079
CSPI01G02810Wax gourdcpiwgoB053
CSPI01G02810Wax gourdcpiwgoB071
CSPI01G02810Wax gourdcpiwgoB118