BhiUN306G45 (gene) Wax gourd

Overview
NameBhiUN306G45
Typegene
OrganismBenincasa hispida (Wax gourd)
Description60S ribosomal protein L23a
LocationContig306 : 884644 .. 887198 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACACATAAAAAGCCCAGCCCATCCATGCAAAGCAAAAAAGCCCAACCCGTTTATTTCATTTAGAGGCAAATTCTTTCCTTTTACCTTCCATTTCTCATTCTTCTTTCTAGGGCAGAAGCCGCCGGTAACCTCTTCCTCTCTTCAATGCTTCTTTCCCTTACTCTAATCTTTTGTTAATTTGTTATATAAGATTTGTTGTTTATGATTATTCGATACATTTCGTTGTTTTGATTTTGGTTCCTTAGAGCCACTATTGTTCCTATCGTTTTTCTTCTCATTTTCATTATTTTGCTTGGTTTGCAGGTGGGTAATTTCGATACAGGGGTTTTCAGCTATGGCGCCTAAAGGTATGTACACATTGTGTTTGTTTCAGTACACAATCTTCATTTATTCGATTCCCTCTGTTCCATAGTAATCTACTGATTAATGAAATCAACTTTTGCTCTGAACTACGAGAATTAGTGAGTTTTCGATGTTTCTGGTGTTTAAGGGAATTTTTGTTCTTCATTCGCTATTTGAATGAATTTTTTGTTGGGATTTAAGTATATGCATACTATATTGCGGACAAGCGTAGTCAGTTGAGTTGGTACCCAGTCTGAGAAAGTGTTAGTGTAATATGTCCTCGGTCTTACTTTTCTTCACTGCATTTTTCTTCAAGTGTTTTAGATGTTACTTTTTTCTTGTTTTGATGGTAGCTGTCAAGTTCTTGAGATGGTTTAATGTGTTTGTGTGTGTATATATAAACGTGAATCAGAATTTCATTGATGGGATGGAAATACAAAAGGGCAATATATGCAATAATGTTATTCCATTGGGAAACAAGAGAAGTAAGATTGTAATCACATAAAAGGATGTGAATTTCAAAAGATTATAAAAGAATGAGGGAAATCCAATTCCCTATCTTCAAATGTCCGATGATTCAGTTCGATCCAAATGAGCCAAATGTATGCTTAATCTCTTTATCCTTAAATGGACGACCATAAGAAGGATATTAAGAAGGGTGGAGGGGTCATTTGGAAAGATCATTTGATAGTTGATGGTTTAATGCATATTCAGTGTGAATTTGTAATGAATGTGAGAATCTGAGCTAAATAGATTAGACATTCTGAATGCTTATGAGCTTTTGCAATGCACAGTTCTTATTCTTAATTTGATGGTTTTTGCAGCTGACAACACCAAAAAGGGTGATCCTAAAGCTCAAGCCCTGAAGACTGCCAAGGCAGTCAAGTCTGGGCCAACTTTCAAGAAGGCTAAAAAAATCAGAACGTCGGTCACATTCCATCGCCCCAAGACATTGAAGAAAGAAAGGAATCCCAAGTATCCTCGAATCAGTGTGACTCCTAGGAACAAGTTGGATCAATATCAAATTCTTAAATATCCACTGACCACTGAGTCTGCGATGAAGAAGATTGAGGATAATAACACCCTTGTTTTTATTGTCGATATTCGTGCTGACAAGAAAAAGATTAAAGATGCTGTGAAGAAGATGTATGACATCCAGACCAAGAAAGTGAACACTCTAATCAGGTATGCTGCATGATTTTAGAAGTTTATAAGTTAAATTACAACTTCCTAAACTTTCAATTTTTCAAGTTCATGTCTAATTGGTCCATGAATTTTAAGGTGTCTAATAGGTCTTTGAACTTTCAATTTTATGTTTAATATATCATTGAATTTTAAAAATGTCAAACCTCATTTTCTTATTTTTTCAATTTTATGTATAATGTGTCACTGATTTATTCGAGATTTTTAATACTTCGAACTATTAGATCTAAAATTGAATTTTACGTTTGATGAGGCTCTTAACTTTTAATTTTGAATAGGTTTTTTAAACATAAAATCTAAAATTTAGGGATCTGATAGATACTAAAGTGAGAGTCCCCCCAAGTTTATGGATCAAATAGACATGAAGTTGTTGGCCCTAGTTTTTATCATTCTAATTTTGCAAATGGAAGAAACACCTAGCTATGACTGTATGCCCTTCCAAGCTGATTATGCACCACTTTATTCTTTAGTTACTATTTTTTTAAAAAAAATAAAAAATAACGTATAAAATTGATTGATTCACATGAAGTCTATATTGTGATGATGACAAAGTATGATTCTACTCATGTAGGCCTGATGGAACAAAGAAGGCATACGTTAGGTTAACCCCAGACTACGATGCTTTGGATGTGGCGAACAAGATTGGAGTTATCTAAACTGCCTAGGCAATTGTTTTCATTTCCATGGCGACAATTTTGTTTAGATATATTTGAGTGCATCTTGTCTGAATCCTAAGGTTTTTAACTGTGTTTTTATATAACATATTGGTCTAGCTAGCTCTGGTTGACTGAGTTCAAAACACTTATGGAATGTGTTCGAATATTTGTATTAGTTGGCCTCAAACACCTTTGTCATACTTCTGAATTCTGTTCATAATTTCTTCTCAATGTAGCACAACTAGATCAAGTCAATCTCTAAAACAGTCAATGATTGTGTTATTGATGTATGGTTAGATAGACAGTCCCTAACAATTTGATCTTTTTCAATTTAGTTTTTAATCTTTCTATAA

mRNA sequence

CACACATAAAAAGCCCAGCCCATCCATGCAAAGCAAAAAAGCCCAACCCGTTTATTTCATTTAGAGGCAAATTCTTTCCTTTTACCTTCCATTTCTCATTCTTCTTTCTAGGGCAGAAGCCGCCGGTGGGTAATTTCGATACAGGGGTTTTCAGCTATGGCGCCTAAAGCTGACAACACCAAAAAGGGTGATCCTAAAGCTCAAGCCCTGAAGACTGCCAAGGCAGTCAAGTCTGGGCCAACTTTCAAGAAGGCTAAAAAAATCAGAACGTCGGTCACATTCCATCGCCCCAAGACATTGAAGAAAGAAAGGAATCCCAAGTATCCTCGAATCAGTGTGACTCCTAGGAACAAGTTGGATCAATATCAAATTCTTAAATATCCACTGACCACTGAGTCTGCGATGAAGAAGATTGAGGATAATAACACCCTTGTTTTTATTGTCGATATTCGTGCTGACAAGAAAAAGATTAAAGATGCTGTGAAGAAGATGTATGACATCCAGACCAAGAAAGTGAACACTCTAATCAGGCCTGATGGAACAAAGAAGGCATACGTTAGGTTAACCCCAGACTACGATGCTTTGGATGTGGCGAACAAGATTGGAGTTATCTAAACTGCCTAGGCAATTGTTTTCATTTCCATGGCGACAATTTTGTTTAGATATATTTGAGTGCATCTTGTCTGAATCCTAAGGTTTTTAACTGTGTTTTTATATAACATATTGGTCTAGCTAGCTCTGGTTGACTGAGTTCAAAACACTTATGGAATGTGTTCGAATATTTGTATTAGTTGGCCTCAAACACCTTTGTCATACTTCTGAATTCTGTTCATAATTTCTTCTCAATGTAGCACAACTAGATCAAGTCAATCTCTAAAACAGTCAATGATTGTGTTATTGATGTATGGTTAGATAGACAGTCCCTAACAATTTGATCTTTTTCAATTTAGTTTTTAATCTTTCTATAA

Coding sequence (CDS)

ATGGCGCCTAAAGCTGACAACACCAAAAAGGGTGATCCTAAAGCTCAAGCCCTGAAGACTGCCAAGGCAGTCAAGTCTGGGCCAACTTTCAAGAAGGCTAAAAAAATCAGAACGTCGGTCACATTCCATCGCCCCAAGACATTGAAGAAAGAAAGGAATCCCAAGTATCCTCGAATCAGTGTGACTCCTAGGAACAAGTTGGATCAATATCAAATTCTTAAATATCCACTGACCACTGAGTCTGCGATGAAGAAGATTGAGGATAATAACACCCTTGTTTTTATTGTCGATATTCGTGCTGACAAGAAAAAGATTAAAGATGCTGTGAAGAAGATGTATGACATCCAGACCAAGAAAGTGAACACTCTAATCAGGCCTGATGGAACAAAGAAGGCATACGTTAGGTTAACCCCAGACTACGATGCTTTGGATGTGGCGAACAAGATTGGAGTTATCTAA

Protein sequence

MAPKADNTKKGDPKAQALKTAKAVKSGPTFKKAKKIRTSVTFHRPKTLKKERNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI
Homology
[Close]
BLAST of BhiUN306G45 vs. TAIR10
Match: AT3G55280.1 (ribosomal protein L23AB)

HSP 1 Score: 191.8 bits (486), Expect = 3.1e-49
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0 

Query: 52  RNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKK 111
           R PKYP+IS TPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKK
Sbjct: 54  RKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKK 113

Query: 112 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 114 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of BhiUN306G45 vs. TAIR10
Match: AT2G39460.1 (ribosomal protein L23AA)

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-44
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0 

Query: 62  TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVN 121
           TPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVN
Sbjct: 64  TPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVN 123

Query: 122 TLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           TLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 124 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of BhiUN306G45 vs. Swiss-Prot
Match: sp|Q9AT35|RL23A_DAUCA (60S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.1e-51
Identity = 113/154 (73.38%), Postives = 117/154 (75.97%), Query Frame = 0 

Query: 1   MAP-KADNTKKGDPKAQALKT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPR 60
           M+P K D TKK D KAQALKT                               +RNPKYPR
Sbjct: 1   MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPR 60

Query: 61  ISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           IS TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KKKIKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of BhiUN306G45 vs. Swiss-Prot
Match: sp|O22644|RL23A_FRIAG (60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-48
Identity = 108/154 (70.13%), Postives = 111/154 (72.08%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKT--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPR 60
           MAP A   KK D KAQALK                                 +RNPKYPR
Sbjct: 1   MAPPAKVAKKPDGKAQALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60

Query: 61  ISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
           IS  PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIK AVKKMYDIQTK
Sbjct: 61  ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           KVNTLIRPDGTKKAYVRLTPDYDALD+ANKIG+I
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154

[Close]
BLAST of BhiUN306G45 vs. Swiss-Prot
Match: sp|Q9M3C3|R23A2_ARATH (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.5e-48
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0 

Query: 52  RNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKK 111
           R PKYP+IS TPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKK
Sbjct: 54  RKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKK 113

Query: 112 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 114 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of BhiUN306G45 vs. Swiss-Prot
Match: sp|Q8LD46|R23A1_ARATH (60S ribosomal protein L23a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL23AA PE=2 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-43
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0 

Query: 62  TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVN 121
           TPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVN
Sbjct: 64  TPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVN 123

Query: 122 TLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           TLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 124 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of BhiUN306G45 vs. Swiss-Prot
Match: sp|Q24JY1|RL23A_BOVIN (60S ribosomal protein L23a OS=Bos taurus OX=9913 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.2e-38
Identity = 79/101 (78.22%), Postives = 87/101 (86.14%), Query Frame = 0 

Query: 52  RNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKK 111
           R PKYPR S   RNKLD Y I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK
Sbjct: 56  RQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKK 115

Query: 112 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           +YDI   KVNTLIRPDG KKAYVRL PDYDALDVANKIG+I
Sbjct: 116 LYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156

[Close]
BLAST of BhiUN306G45 vs. TrEMBL
Match: tr|A0A0A0KQU4|A0A0A0KQU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G264270 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.2e-53
Identity = 146/152 (96.05%), Postives = 148/152 (97.37%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRIS 60
           MAPKAD TKK DPKAQAL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+RNPKYPRIS
Sbjct: 1   MAPKADMTKKADPKAQALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRNPKYPRIS 60

Query: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
           VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           NTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of BhiUN306G45 vs. TrEMBL
Match: tr|A0A2R6RRE6|A0A2R6RRE6_ACTCH (60S ribosomal protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02901 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.6e-52
Identity = 114/152 (75.00%), Postives = 116/152 (76.32%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRIS 60
           MAPKAD TKK DPKAQALK                               +RNPKYPRIS
Sbjct: 1   MAPKADGTKKADPKAQALKAAKAVKSTTFKKKAKKIRTSVTFHRPRTLKKDRNPKYPRIS 60

Query: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
             PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  APPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           NTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of BhiUN306G45 vs. TrEMBL
Match: tr|A0A2R6RX20|A0A2R6RX20_ACTCH (60S ribosomal protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc01660 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.7e-52
Identity = 113/152 (74.34%), Postives = 116/152 (76.32%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRIS 60
           MAPKA+ TKK DPKAQALK                               +RNPKYPRIS
Sbjct: 1   MAPKAEGTKKADPKAQALKAAKAVKSTTFKKKAKKIRTSVTFHRPRTLKKDRNPKYPRIS 60

Query: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
             PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  APPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           NTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of BhiUN306G45 vs. TrEMBL
Match: tr|A0A1S3CFM9|A0A1S3CFM9_CUCME (60S ribosomal protein L23a OS=Cucumis melo OX=3656 GN=LOC103500191 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.1e-52
Identity = 115/153 (75.16%), Postives = 120/153 (78.43%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRI 60
           MAPKAD++KK DPKAQALKT                               +RNPKYPRI
Sbjct: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  SVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120
           SVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IKDAVKKMYDIQTKK
Sbjct: 61  SVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of BhiUN306G45 vs. TrEMBL
Match: tr|W9R299|W9R299_9ROSA (60S ribosomal protein L23A OS=Morus notabilis OX=981085 GN=L484_025406 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.8e-51
Identity = 115/153 (75.16%), Postives = 117/153 (76.47%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRI 60
           MAPKADNTKK DPKAQA KT                               ERNPKYPRI
Sbjct: 1   MAPKADNTKKSDPKAQASKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  SVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120
           S  PR+KLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK
Sbjct: 61  SAPPRHKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of BhiUN306G45 vs. NCBI nr
Match: XP_023541685.1 (60S ribosomal protein L23a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.3 bits (560), Expect = 4.4e-54
Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRIS 60
           MAPKADNTKK DPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RNPKYPRIS
Sbjct: 1   MAPKADNTKKTDPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNPKYPRIS 60

Query: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
            TPR+KLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  ATPRHKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           NTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of BhiUN306G45 vs. NCBI nr
Match: XP_004140408.1 (PREDICTED: 60S ribosomal protein L23a isoform X1 [Cucumis sativus] >KGN50792.1 hypothetical protein Csa_5G264270 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 4.9e-53
Identity = 146/152 (96.05%), Postives = 148/152 (97.37%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRIS 60
           MAPKAD TKK DPKAQAL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+RNPKYPRIS
Sbjct: 1   MAPKADMTKKADPKAQALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRNPKYPRIS 60

Query: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
           VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           NTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of BhiUN306G45 vs. NCBI nr
Match: XP_022922609.1 (60S ribosomal protein L23a-like [Cucurbita moschata] >XP_022990476.1 60S ribosomal protein L23a-like isoform X1 [Cucurbita maxima] >XP_023541243.1 60S ribosomal protein L23a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.9 bits (546), Expect = 1.9e-52
Identity = 144/152 (94.74%), Postives = 148/152 (97.37%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRIS 60
           MAPKAD++KK DPKAQAL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+RNPKYPRIS
Sbjct: 1   MAPKADSSKKADPKAQALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRNPKYPRIS 60

Query: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
            TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  ATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           NTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of BhiUN306G45 vs. NCBI nr
Match: PSS32601.1 (60S ribosomal protein like [Actinidia chinensis var. chinensis])

HSP 1 Score: 214.5 bits (545), Expect = 2.4e-52
Identity = 114/152 (75.00%), Postives = 116/152 (76.32%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRIS 60
           MAPKAD TKK DPKAQALK                               +RNPKYPRIS
Sbjct: 1   MAPKADGTKKADPKAQALKAAKAVKSTTFKKKAKKIRTSVTFHRPRTLKKDRNPKYPRIS 60

Query: 61  VTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120
             PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV
Sbjct: 61  APPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKV 120

Query: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           NTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 NTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152

[Close]
BLAST of BhiUN306G45 vs. NCBI nr
Match: XP_022139271.1 (60S ribosomal protein L23a [Momordica charantia])

HSP 1 Score: 213.0 bits (541), Expect = 7.1e-52
Identity = 116/153 (75.82%), Postives = 121/153 (79.08%), Query Frame = 0 

Query: 1   MAPKADNTKKGDPKAQALKT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERNPKYPRI 60
           MAPKAD++KK DPKAQALKT                              X+RNPKYPRI
Sbjct: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKXDRNPKYPRI 60

Query: 61  SVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120
           S TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIK+AVKKMYDIQTKK
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKNAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGVI 153
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIG+I
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

The following BLAST results are available for this feature:
BLAST of BhiUN306G45 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G55280.13.1e-4995.05ribosomal protein L23AB[more]
AT2G39460.11.3e-4497.80ribosomal protein L23AA[more]
BLAST of BhiUN306G45 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9AT35|RL23A_DAUCA3.1e-5173.3860S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1[more]
sp|O22644|RL23A_FRIAG1.5e-4870.1360S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1[more]
sp|Q9M3C3|R23A2_ARATH5.5e-4895.0560S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=... [more]
sp|Q8LD46|R23A1_ARATH2.4e-4397.8060S ribosomal protein L23a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL23AA PE=2 SV=... [more]
sp|Q24JY1|RL23A_BOVIN5.2e-3878.2260S ribosomal protein L23a OS=Bos taurus OX=9913 GN=RPL23A PE=2 SV=1[more]
BLAST of BhiUN306G45 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KQU4|A0A0A0KQU4_CUCSA3.2e-5396.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G264270 PE=3 SV=1[more]
tr|A0A2R6RRE6|A0A2R6RRE6_ACTCH1.6e-5275.0060S ribosomal protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=C... [more]
tr|A0A2R6RX20|A0A2R6RX20_ACTCH4.7e-5274.3460S ribosomal protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=C... [more]
tr|A0A1S3CFM9|A0A1S3CFM9_CUCME6.1e-5275.1660S ribosomal protein L23a OS=Cucumis melo OX=3656 GN=LOC103500191 PE=3 SV=1[more]
tr|W9R299|W9R299_9ROSA1.8e-5175.1660S ribosomal protein L23A OS=Morus notabilis OX=981085 GN=L484_025406 PE=3 SV=1[more]
BLAST of BhiUN306G45 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023541685.14.4e-5496.0560S ribosomal protein L23a-like [Cucurbita pepo subsp. pepo][more]
XP_004140408.14.9e-5396.05PREDICTED: 60S ribosomal protein L23a isoform X1 [Cucumis sativus] >KGN50792.1 h... [more]
XP_022922609.11.9e-5294.7460S ribosomal protein L23a-like [Cucurbita moschata] >XP_022990476.1 60S ribosom... [more]
PSS32601.12.4e-5275.0060S ribosomal protein like [Actinidia chinensis var. chinensis][more]
XP_022139271.17.1e-5275.8260S ribosomal protein L23a [Momordica charantia][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR012678Ribosomal_L23/L15e_core_dom_sf
IPR001014Ribosomal_L23/L25_CS
IPR005633Ribosomal_L23/L25_N
IPR013025Ribosomal_L25/23
IPR019985Ribosomal_L23
IPR012677Nucleotide-bd_a/b_plait_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000027 ribosomal large subunit assembly
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
BhiUN306M45BhiUN306M45mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 33..152
e-value: 8.2E-60
score: 202.1
IPR019985Ribosomal protein L23TIGRFAMTIGR03636TIGR03636coord: 76..152
e-value: 5.2E-29
score: 98.4
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 72..134
e-value: 3.0E-14
score: 53.1
IPR013025Ribosomal protein L25/L23HAMAPMF_01369_ARibosomal_L23_Acoord: 72..152
score: 22.376
IPR005633Ribosomal protein L23/L25, N-terminalPFAMPF03939Ribosomal_L23eNcoord: 14..61
e-value: 5.6E-19
score: 68.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR11620:SF14SUBFAMILY NOT NAMEDcoord: 1..152
NoneNo IPR availablePANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 1..152
IPR001014Ribosomal protein L23/L25, conserved sitePROSITEPS00050RIBOSOMAL_L23coord: 130..145
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILYSSF54189Ribosomal proteins S24e, L23 and L15ecoord: 70..145

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
BhiUN306G45Csa5G264270Cucumber (Chinese Long) v2cuwgoB460
BhiUN306G45MELO3C022601Melon (DHL92) v3.5.1mewgoB056
BhiUN306G45CsGy5G009510Cucumber (Gy14) v2cgybwgoB438
BhiUN306G45MELO3C022601.2Melon (DHL92) v3.6.1medwgoB055
BhiUN306G45CsaV3_5G012820Cucumber (Chinese Long) v3cucwgoB473
BhiUN306G45Cla97C11G207200Watermelon (97103) v2wgowmbB113
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
BhiUN306G45Bottle gourd (USVL1VR-Ls)lsiwgoB099