BhiUN245G9 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	BhiUN245G9
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	E3 ubiquitin-protein ligase MIEL1-like
Location	Contig245 : 250252 .. 250569 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCATCAGATCCCTACTTTCCGTAGTTGTTTTGGCTCTTCTCTTCTTCTCCGAATCCCTACCCACTTCCAATTCTCTTACCGGAATCCCTCGCCGGAACATCTTGCAGACGGCGGCTCATCGGATTGCAGATAGCAGTGTTGAGAAGTCGAATAATTTCCATATCAAAGATAGAAGGCGAGCTCGACCTATACTAATTACCGGCAGCGGCAGCGGCAGCCACCATAAATCGGAGGCGAATCGGAGCCGAGTAGAATCCTTTGAGGTTGGATCTGCGTTGTGTATCTGTATTTTCCTGGGGCTGTTCTTGTGA

mRNA sequence

ATGGCTGCCATCAGATCCCTACTTTCCGTAGTTGTTTTGGCTCTTCTCTTCTTCTCCGAATCCCTACCCACTTCCAATTCTCTTACCGGAATCCCTCGCCGGAACATCTTGCAGACGGCGGCTCATCGGATTGCAGATAGCAGTGTTGAGAAGTCGAATAATTTCCATATCAAAGATAGAAGGCGAGCTCGACCTATACTAATTACCGGCAGCGGCAGCGGCAGCCACCATAAATCGGAGGCGAATCGGAGCCGAGTAGAATCCTTTGAGGTTGGATCTGCGTTGTGTATCTGTATTTTCCTGGGGCTGTTCTTGTGA

Coding sequence (CDS)

ATGGCTGCCATCAGATCCCTACTTTCCGTAGTTGTTTTGGCTCTTCTCTTCTTCTCCGAATCCCTACCCACTTCCAATTCTCTTACCGGAATCCCTCGCCGGAACATCTTGCAGACGGCGGCTCATCGGATTGCAGATAGCAGTGTTGAGAAGTCGAATAATTTCCATATCAAAGATAGAAGGCGAGCTCGACCTATACTAATTACCGGCAGCGGCAGCGGCAGCCACCATAAATCGGAGGCGAATCGGAGCCGAGTAGAATCCTTTGAGGTTGGATCTGCGTTGTGTATCTGTATTTTCCTGGGGCTGTTCTTGTGA

Protein sequence

MAAIRSLLSVVVLALLFFSESLPTSNSLTGIPRRNILQTAAHRIADSSVEKSNNFHIKDRRRARPILITGSGSGSHHKSEANRSRVESFEVGSALCICIFLGLFL

Homology

[Close]

BLAST of BhiUN245G9 vs. TrEMBL
Match: tr|A0A0A0K929|A0A0A0K929_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394020 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-25
Identity = 77/115 (66.96%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 1   MAAIRSLLSVVVLALLFFSESLPTSNSLTGIPRRNILQTAAHRIADSSVE-------KSN 60
           MAAIR LLS+  LAL FFSESL TS+SLTGIP R IL TAAHRI D SVE       KSN
Sbjct: 1   MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSN 60

Query: 61  NFHIKD--RRRARPILITGSGSGSHHKSEANR-SRVESFEVGSALCICIFLGLFL 106
             HIKD  +RR+ PIL++ S +G+HHKS ANR S V S EVGS LCICIFLGLFL
Sbjct: 61  KLHIKDIRKRRSGPILVS-SSNGNHHKSAANRPSPVASLEVGSMLCICIFLGLFL 114

[Close]

BLAST of BhiUN245G9 vs. TrEMBL
Match: tr|A0A1S3BT53|A0A1S3BT53_CUCME (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-22
Identity = 68/111 (61.26%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 1   MAAIRSLLSVVVLALLFFSESLPTSNSLTGIPRRNILQTAAHRIADSSVE-----KSNNF 60
           MAAIR L+S+ +LALLFFSESL TS+SLTGIP RNIL T AHRI + SVE     KSN  
Sbjct: 1   MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKL 60

Query: 61  HIKDRRRARPILITGSGSGSHHKSEANRSRVESFE---------VGSALCI 98
           H KDRRR RPILI+GS +G HHKS  NRSRV SFE         +G  +C+
Sbjct: 61  HTKDRRRIRPILISGS-NGMHHKSAENRSRVASFEDRHELVRRDIGQVVCL 110

[Close]

BLAST of BhiUN245G9 vs. TrEMBL
Match: tr|A0A0A0KAQ7|A0A0A0KAQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-09
Identity = 56/113 (49.56%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 1   MAAIRSLLSVVVLALLFFSESLPT--------SNSLTGIPRRNILQTAAHRIADSSVEKS 60
           MAAI+SL+S+ +LALLFFSESL T        SNS+T + RRNILQTA H IADS  E  
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADS--EGK 60

Query: 61  NNFHIKDRRRARPILITGSGSGSHHKSEANRSRVESFEVGSALCICIFLGLFL 106
            N  IK     R   I          S ANRSRV+SF +G  L    F GL L
Sbjct: 61  MNVRIKKGGLGRFRPIGAXXXXXXXXSAANRSRVDSFGLGFLL---FFFGLVL 108

[Close]

BLAST of BhiUN245G9 vs. NCBI nr
Match: KGN44882.1 (hypothetical protein Csa_7G394020 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-25
Identity = 77/115 (66.96%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 1   MAAIRSLLSVVVLALLFFSESLPTSNSLTGIPRRNILQTAAHRIADSSVE-------KSN 60
           MAAIR LLS+  LAL FFSESL TS+SLTGIP R IL TAAHRI D SVE       KSN
Sbjct: 1   MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSN 60

Query: 61  NFHIKD--RRRARPILITGSGSGSHHKSEANR-SRVESFEVGSALCICIFLGLFL 106
             HIKD  +RR+ PIL++ S +G+HHKS ANR S V S EVGS LCICIFLGLFL
Sbjct: 61  KLHIKDIRKRRSGPILVS-SSNGNHHKSAANRPSPVASLEVGSMLCICIFLGLFL 114

[Close]

BLAST of BhiUN245G9 vs. NCBI nr
Match: XP_008451651.1 (PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo])

HSP 1 Score: 114.8 bits (286), Expect = 1.8e-22
Identity = 68/111 (61.26%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 1   MAAIRSLLSVVVLALLFFSESLPTSNSLTGIPRRNILQTAAHRIADSSVE-----KSNNF 60
           MAAIR L+S+ +LALLFFSESL TS+SLTGIP RNIL T AHRI + SVE     KSN  
Sbjct: 1   MAAIRPLVSIALLALLFFSESLLTSHSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKL 60

Query: 61  HIKDRRRARPILITGSGSGSHHKSEANRSRVESFE---------VGSALCI 98
           H KDRRR RPILI+GS +G HHKS  NRSRV SFE         +G  +C+
Sbjct: 61  HTKDRRRIRPILISGS-NGMHHKSAENRSRVASFEDRHELVRRDIGQVVCL 110

[Close]

BLAST of BhiUN245G9 vs. NCBI nr
Match: XP_011659775.1 (PREDICTED: uncharacterized protein LOC105436272 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 1.8e-17
Identity = 63/100 (63.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 1  MAAIRSLLSVVVLALLFFSESLPTSNSLTGIPRRNILQTAAHRIADSSVE-------KSN 60
          MAAIR LLS+  LAL FFSESL TS+SLTGIP R IL TAAHRI D SVE       KSN
Sbjct: 1  MAAIRPLLSIAFLALFFFSESLLTSHSLTGIPHRTILNTAAHRIVDGSVEYSSYQIRKSN 60

Query: 61 NFHIKD--RRRARPILITGSGSGSHHKSEANR-SRVESFE 91
            HIKD  +RR+ PIL++ S +G+HHKS ANR S V S E
Sbjct: 61 KLHIKDIRKRRSGPILVS-SSNGNHHKSAANRPSPVASLE 99

[Close]

BLAST of BhiUN245G9 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_7G394060 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 3.9e-09
Identity = 56/113 (49.56%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 1   MAAIRSLLSVVVLALLFFSESLPT--------SNSLTGIPRRNILQTAAHRIADSSVEKS 60
           MAAI+SL+S+ +LALLFFSESL T        SNS+T + RRNILQTA H IADS  E  
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADS--EGK 60

Query: 61  NNFHIKDRRRARPILITGSGSGSHHKSEANRSRVESFEVGSALCICIFLGLFL 106
            N  IK     R   I          S ANRSRV+SF +G  L    F GL L
Sbjct: 61  MNVRIKKGGLGRFRPIGAXXXXXXXXSAANRSRVDSFGLGFLL---FFFGLVL 108

[Close]

BLAST of BhiUN245G9 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 67.4 bits (163), Expect = 3.3e-08
Identity = 48/114 (42.11%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 1   MAAIRSLLSVVVLALLFFSESLPTS--------NSLTGIPRRNILQTA-AHRIADSSVEK 60
           MA I+SL+S+ +LALL   E LP S        + L G+ R + LQTA  H++A++ +  
Sbjct: 63  MAPIKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGN 122

Query: 61  SNNFHIKDRRRARPILITGSGSGSHHKSEANRSRVESFEVGSALCICIFLGLFL 106
             +F  K RRRAR  +    G      S AN SR  SF VGS LC+C   GLFL
Sbjct: 123 QYSFEQKIRRRARRAVRRAEGPS---PSSANWSRTSSFGVGSLLCLCTVFGLFL 173

The following BLAST results are available for this feature:

BLAST of BhiUN245G9 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of BhiUN245G9 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of BhiUN245G9 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K929\|A0A0A0K929_CUCSA	1.2e-25	66.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394020 PE=4 SV=1	[more]
tr\|A0A1S3BT53\|A0A1S3BT53_CUCME	1.2e-22	61.26	E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 P...	[more]
tr\|A0A0A0KAQ7\|A0A0A0KAQ7_CUCSA	2.6e-09	49.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1	[more]

BLAST of BhiUN245G9 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44882.1	1.7e-25	66.96	hypothetical protein Csa_7G394020 [Cucumis sativus]	[more]
XP_008451651.1	1.8e-22	61.26	PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]	[more]
XP_011659775.1	1.8e-17	63.00	PREDICTED: uncharacterized protein LOC105436272 [Cucumis sativus]	[more]
KGN44886.1	3.9e-09	49.56	hypothetical protein Csa_7G394060 [Cucumis sativus]	[more]
XP_022992473.1	3.3e-08	42.11	uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN245M9	BhiUN245M9	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
BhiUN245G9	Csa7G394020	Cucumber (Chinese Long) v2	cuwgoB653
BhiUN245G9	ClCG09G006350	Watermelon (Charleston Gray)	wcgwgoB025
BhiUN245G9	CSPI07G16990	Wild cucumber (PI 183967)	cpiwgoB662
BhiUN245G9	Lsi02G023560	Bottle gourd (USVL1VR-Ls)	lsiwgoB214
BhiUN245G9	Cla97C09G168900	Watermelon (97103) v2	wgowmbB161

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
BhiUN245G9	Cucumber (Gy14) v1	cgywgoB746
BhiUN245G9	Cucumber (Gy14) v2	cgybwgoB622
BhiUN245G9	Cucurbita maxima (Rimu)	cmawgoB0472
BhiUN245G9	Cucurbita maxima (Rimu)	cmawgoB1105
BhiUN245G9	Cucurbita moschata (Rifu)	cmowgoB0471
BhiUN245G9	Cucurbita moschata (Rifu)	cmowgoB1102
BhiUN245G9	Cucurbita pepo (Zucchini)	cpewgoB0187
BhiUN245G9	Cucurbita pepo (Zucchini)	cpewgoB0396
BhiUN245G9	Cucumber (Chinese Long) v3	cucwgoB677
BhiUN245G9	Watermelon (97103) v1	wgowmB161
BhiUN245G9	Silver-seed gourd	carwgoB0127
BhiUN245G9	Silver-seed gourd	carwgoB1003