Bhi10G001243 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G001243
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Disease resistance protein
Location	chr10 : 38718939 .. 38719265 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAATTCCTATGGACTTTTGCTGCGGAAGAAATGTTGAAGAAGGTTGTCAAACTTGCAGCTGAGCAAACTGGGTTGGCATGGAGCTTGGAGAAGGAGCTATCAGAGTTGACAGAATGGCTACTGAAGGCAGAAACCTTCTTGCGTGATATACACACAACAACATTACATCAGGATTCAGTGAAACTGTGGGTGGATAAACTTCAAAATCTTGCCAATCAAGCAGATGATGTATTAGACAAGCTTGTTTATGAAGATCTTCGAGGAAAGGTAGCAAAAGAAAAAATGAAAAAAGGTACATGCTTTTGTTTCTGCTTGCAGTAA

mRNA sequence

ATGGCCGAATTCCTATGGACTTTTGCTGCGGAAGAAATGTTGAAGAAGGTTGTCAAACTTGCAGCTGAGCAAACTGGGTTGGCATGGAGCTTGGAGAAGGAGCTATCAGAGTTGACAGAATGGCTACTGAAGGCAGAAACCTTCTTGCGTGATATACACACAACAACATTACATCAGGATTCAGTGAAACTGTGGGTGGATAAACTTCAAAATCTTGCCAATCAAGCAGATGATGTATTAGACAAGCTTGTTTATGAAGATCTTCGAGGAAAGGTAGCAAAAGAAAAAATGAAAAAAGGTACATGCTTTTGTTTCTGCTTGCAGTAA

Coding sequence (CDS)

ATGGCCGAATTCCTATGGACTTTTGCTGCGGAAGAAATGTTGAAGAAGGTTGTCAAACTTGCAGCTGAGCAAACTGGGTTGGCATGGAGCTTGGAGAAGGAGCTATCAGAGTTGACAGAATGGCTACTGAAGGCAGAAACCTTCTTGCGTGATATACACACAACAACATTACATCAGGATTCAGTGAAACTGTGGGTGGATAAACTTCAAAATCTTGCCAATCAAGCAGATGATGTATTAGACAAGCTTGTTTATGAAGATCTTCGAGGAAAGGTAGCAAAAGAAAAAATGAAAAAAGGTACATGCTTTTGTTTCTGCTTGCAGTAA

Protein sequence

MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQDSVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKKGTCFCFCLQ

Homology

[Close]

BLAST of Bhi10G001243 vs. TrEMBL
Match: tr|Q2V727|Q2V727_CUCME (R-FOM-2 OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.9e-29
Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           M +FLWTFA EEMLKKV+K+A EQTGLAW  +K LS+L +WLLKAE FLR+I+T  LH D
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQTGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV++WVD L++L  QADD+LD++VYEDLR KV   KMKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEDLRQKVQTRKMKK 99

[Close]

BLAST of Bhi10G001243 vs. TrEMBL
Match: tr|A0A1S3CHQ5|A0A1S3CHQ5_CUCME (disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103501070 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.8e-29
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           M +FLWTFA EEMLKKV+K+A EQTGLAW  +K LS+L +WLLKAE FLRDI+T  LH D
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAQEQTGLAWGFQKHLSKLQKWLLKAEAFLRDINTRKLHHD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV++WVD L++L  QADD+LD++VYE LR KV   KMKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVHTRKMKK 99

[Close]

BLAST of Bhi10G001243 vs. TrEMBL
Match: tr|Q6E436|Q6E436_CUCME (FOM-2 OS=Cucumis melo OX=3656 GN=Fom-2 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.7e-28
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           M +FLWTFA EEMLKKV+K+A EQ GLAW  +K LS+L +WLLKAE FLR+I+T  LH D
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV++WVD L++L  QADD+LD++VYE LR KV   KMKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKK 99

[Close]

BLAST of Bhi10G001243 vs. TrEMBL
Match: tr|A0A1S3C9H9|A0A1S3C9H9_CUCME (putative disease resistance protein RGA3 OS=Cucumis melo OX=3656 GN=LOC103498352 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.7e-28
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           M +FLWTFA EEMLKKV+K+A EQ GLAW  +K LS+L +WLLKAE FLR+I+T  LH D
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQAGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV++WVD L++L  QADD+LD++VYE LR KV   KMKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVQTRKMKK 99

[Close]

BLAST of Bhi10G001243 vs. TrEMBL
Match: tr|A0A0A0KXG9|A0A0A0KXG9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016460 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.1e-26
Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           MAEFLWTFA +E+LKKV+KLAA+Q GLAW L+KELS L++WLLKAE  L +I+   LH  
Sbjct: 1   MAEFLWTFAVQEVLKKVLKLAADQIGLAWGLDKELSNLSQWLLKAEAILGEINRKKLHPS 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV+LWV+ LQ + ++ADD+LD+LVYEDLR KV K  + K
Sbjct: 61  SVRLWVEDLQLVVHEADDLLDELVYEDLRTKVEKGPINK 99

[Close]

BLAST of Bhi10G001243 vs. NCBI nr
Match: XP_022150842.1 (putative disease resistance protein RGA3 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 1.9e-30
Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           MAEFL TFAAEE+LKKVVK+AAEQ GLAW LEK+L EL EWLLK E FLRDI+   LH D
Sbjct: 1   MAEFLLTFAAEEVLKKVVKVAAEQIGLAWGLEKDLEELREWLLKTEAFLRDINKRKLHSD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV+LWVDKLQ+L ++A+D+LD+LVYEDLR KV   KMKK
Sbjct: 61  SVRLWVDKLQDLVHEAEDLLDELVYEDLRRKVQTAKMKK 99

[Close]

BLAST of Bhi10G001243 vs. NCBI nr
Match: XP_022158717.1 (putative disease resistance protein RGA3 [Momordica charantia])

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-30
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           MAEFLWTFA +E+LKKV K+AAEQ GLAW L+KEL EL EWLLK ETFLRDI+   LH D
Sbjct: 1   MAEFLWTFAVQEVLKKVAKVAAEQIGLAWGLKKELHELREWLLKTETFLRDINKRKLHHD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV+LWVDKLQ+L ++A+ +LD+LVYEDLR KV   KMKK
Sbjct: 61  SVRLWVDKLQHLVHEAEHLLDELVYEDLRRKVVTGKMKK 99

[Close]

BLAST of Bhi10G001243 vs. NCBI nr
Match: XP_022150870.1 (putative disease resistance protein At1g50180 [Momordica charantia])

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-29
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           MAEFL TFA EE+LKKVVK+AAEQ GLAW LEK+L EL EWLLK E FLRDI+   LH D
Sbjct: 1   MAEFLLTFAVEEVLKKVVKVAAEQIGLAWGLEKDLEELREWLLKTEAFLRDINKRKLHSD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV+LWVDKLQ+L ++A+D+LD+L+YEDLR KV   KMKK
Sbjct: 61  SVRLWVDKLQDLVHEAEDLLDELLYEDLRRKVQTAKMKK 99

[Close]

BLAST of Bhi10G001243 vs. NCBI nr
Match: ABB91438.1 (R-FOM-2 [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 6.0e-29
Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           M +FLWTFA EEMLKKV+K+A EQTGLAW  +K LS+L +WLLKAE FLR+I+T  LH D
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQTGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV++WVD L++L  QADD+LD++VYEDLR KV   KMKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEDLRQKVQTRKMKK 99

[Close]

BLAST of Bhi10G001243 vs. NCBI nr
Match: XP_008462780.1 (PREDICTED: disease resistance protein RGA2-like [Cucumis melo])

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 1   MAEFLWTFAAEEMLKKVVKLAAEQTGLAWSLEKELSELTEWLLKAETFLRDIHTTTLHQD 60
           M +FLWTFA EEMLKKV+K+A EQTGLAW  +K LS+L +WLLKAE FLRDI+T  LH D
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAQEQTGLAWGFQKHLSKLQKWLLKAEAFLRDINTRKLHHD 60

Query: 61  SVKLWVDKLQNLANQADDVLDKLVYEDLRGKVAKEKMKK 100
           SV++WVD L++L  QADD+LD++VYE LR KV   KMKK
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEHLRQKVHTRKMKK 99

The following BLAST results are available for this feature:

BLAST of Bhi10G001243 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi10G001243 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi10G001243 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|Q2V727\|Q2V727_CUCME	3.9e-29	66.67	R-FOM-2 OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
tr\|A0A1S3CHQ5\|A0A1S3CHQ5_CUCME	8.8e-29	66.67	disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103501070 PE=...	[more]
tr\|Q6E436\|Q6E436_CUCME	9.7e-28	64.65	FOM-2 OS=Cucumis melo OX=3656 GN=Fom-2 PE=3 SV=1	[more]
tr\|A0A1S3C9H9\|A0A1S3C9H9_CUCME	9.7e-28	64.65	putative disease resistance protein RGA3 OS=Cucumis melo OX=3656 GN=LOC103498352...	[more]
tr\|A0A0A0KXG9\|A0A0A0KXG9_CUCSA	9.1e-26	62.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016460 PE=3 SV=1	[more]

BLAST of Bhi10G001243 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150842.1	1.9e-30	72.73	putative disease resistance protein RGA3 [Momordica charantia]	[more]
XP_022158717.1	3.2e-30	70.71	putative disease resistance protein RGA3 [Momordica charantia]	[more]
XP_022150870.1	1.2e-29	70.71	putative disease resistance protein At1g50180 [Momordica charantia]	[more]
ABB91438.1	6.0e-29	66.67	R-FOM-2 [Cucumis melo]	[more]
XP_008462780.1	1.3e-28	66.67	PREDICTED: disease resistance protein RGA2-like [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001243	Bhi10M001243	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23155	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 1..103
None	No IPR available	PANTHER	PTHR23155:SF877	SUBFAMILY NOT NAMED	coord: 1..103

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi10G001243	Csa2G433330	Cucumber (Chinese Long) v2	cuwgoB174
Bhi10G001243	Csa2G435450	Cucumber (Chinese Long) v2	cuwgoB187
Bhi10G001243	CsGy2G026890	Cucumber (Gy14) v2	cgybwgoB168
Bhi10G001243	CsaV3_2G036070	Cucumber (Chinese Long) v3	cucwgoB180

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G001243	Cucumber (Gy14) v1	cgywgoB534
Bhi10G001243	Cucurbita maxima (Rimu)	cmawgoB0696
Bhi10G001243	Cucurbita maxima (Rimu)	cmawgoB0759
Bhi10G001243	Cucurbita moschata (Rifu)	cmowgoB0690
Bhi10G001243	Cucurbita moschata (Rifu)	cmowgoB0749
Bhi10G001243	Cucurbita pepo (Zucchini)	cpewgoB0358
Bhi10G001243	Cucurbita pepo (Zucchini)	cpewgoB0950
Bhi10G001243	Wild cucumber (PI 183967)	cpiwgoB171
Bhi10G001243	Bottle gourd (USVL1VR-Ls)	lsiwgoB069
Bhi10G001243	Melon (DHL92) v3.6.1	medwgoB128
Bhi10G001243	Melon (DHL92) v3.6.1	medwgoB139
Bhi10G001243	Melon (DHL92) v3.5.1	mewgoB126
Bhi10G001243	Watermelon (Charleston Gray)	wcgwgoB299
Bhi10G001243	Watermelon (97103) v2	wgowmbB370
Bhi10G001243	Watermelon (97103) v1	wgowmB382
Bhi10G001243	Silver-seed gourd	carwgoB1237