Bhi10G000121 (gene) Wax gourd

Overview
NameBhi10G000121
Typegene
OrganismBenincasa hispida (Wax gourd)
Description50S ribosomal protein L18-like
Locationchr10 : 3369380 .. 3373692 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGGCTTACTCGGATGTCCCTGGAGAGAGGATGTGAACAAAGCACACCAGTACAAGTCCGATCAGATAACTGAAGAGCGTCAACACCATTCACCAACTTATCAACTCCATTCTGCGATTCAGCCGCTGCCGCCTTGGAAGAAGCGGCCGCCGCCGCTGCTTTTCCTCCTCGCTTAGCCGCTGCAGCCGCCTTCTTCTGAGCCGCTTTCTTCTTGCTCGCGTCGGAAACCATCCTTAACCTAAGAAGTTTGAAAAAGAAAAGGAATCAACCACCAAAAAACAAAACCCCAACAACACAATCAAAATGAAATCAGAGACGTAAAGAAGAATCCTCAATACATGGACATACCTGGGGAAACGGAGAAAGAAGATCCAAGGAAAAACGACACCGACAGAGCGAGCGAGAAGGAGCAGTGAGAAGAGGAAGCAGATCTAGGGCTTGAAGAAATCGCTCTTCGTTTCTCACGGCGCTTTTGTTGGGCGCTTTTTATCAGAGACCTGCGACGCGTAATGCAATGCGGATCAAGGGTTCGAGGTTCTGTGATTCAGGAGGCTGAGCCTTCCGTTTTATAGCCCTCCTCGATCTTTCCACGTGTCTTTTACGAACCACTTCTTCTGGTTGCGTAGCCGACTGACTTTGTTAATTCTAATGCCCTCCCGAGGGCACATTAGACAGTTAACATTGAATGTAAATTGGGCTTGCTATGGAGCACTTGATCTTGATGACTCGGCCCAATTAGACCCATTAGGAGGCCCATGGGCCTTATCAGTTCGTAATCGGGAAGCCCATGGGCTTGCACTTTCGGTTTTCCAAAAAGAAAAGAAAAGAAAAAGAAGGAAATCAGATTTTCCTTCAATTTCACGCTGGCAGAACCACCCCCCCAACTCTCCTCACCGCCGCCCGCCATCCTCACGTCGTTCGCCCAATCACCGGCCGCCACGTCCGCGCCGTCGACCGCCGTTCCCATAGCCGTCGCCGGTAAGCCATTTTCCGTCTGCCGTTCGCATAGTTTATTTGAATGGGCTTAGTCATTTTTAGTGAGCTTAATGAACCACTAATGGCGATTCTGTATCTTTTTTCAATATTGCTCTGTTCGACCGCCATGGGTGGACAGGAAGCAAGTGTGAAAACTGTATAGACAATGGACCAAACCCAAAACTCAAAATCAATGAAACAGAAAGAGTTTAAAACGAAATTGGAAGATGGGTTTTCGATTTATGATGGGAAGAGAGAGAGGAGAGAAATAAAGAAAAGTGGAGGGAGGCTGCCTTAGTTTCATAACTCTTAGAATTGAGATTCCTCAGAATTCTAGACTTTTTCTCTTAATTCAGCAGACTTTTACTTTGTCGAATGTCCTTATTTGATGAATCGTCTGATGGGCTGCTTATTATTTATTGCAGATAAGTTTAGGTCATTGGGAATTCGATTGTTGTTACATGATCTTTGTGGGTCCTTGGTTCTGTCCTTGTCCTTCTTGGAGCTCATTGATCTATAATTCAAGGACCCATCAGCTCATTTGAACTTTTTATAAGCGCTGCAATACAGGTCAGGCTCCCCTTAGCTACAATATTCGGTTTTCTTATGCAATGTAGAATATTGCAGCGCTTATAAAAAGTTCATAGAATTTCCTATCTCTTTTTTATTTTTGACTCCTGTGGTGTGCTTTTATTTTGCTTTTTGATTGGAAATGACTACAATGAAGCCTAAATTTACGACATCAGATGTTATGCATACACTTGAACGTGTTCATTGTCTTAGTGAATGATCTCATCACATATGCAGTCTGCATCCTTCCCAGTTAGAGTTGGATTTGGTTTTCTTTCTTGAAGGGTTTCCTTTCAATCTTTCTTCATTTTCCTATTAAAATCTTTCATTGCTAAATTGCTAATCTGCATTTGAGGCATGTTGAATTGAAGCTGAAATGTCTATCGTCATTTCTACCCCTTCCCCGCCACTCCACATATATATATACACAATTTAATGGAACTTTTCACTACCTCGTTTGCTGGTTTTACAAAATGAAATGGTTCTATAAACCATACTGTTTCCATGTCAATTTGAGTAGTAGACCTGGTTGACGAAATATCTAATTAATCCAATTTTGAGGATGGAAAACCATTAACCTATCGCAATATTTGCCAATGATTTATTTTGTCACTTAGCAATTTTGTGCATCAATTTCATCAACTTGTTTGTTTTTAATCATCTGTTGCACCTTCATTGTCTACTTCTTCCATTGTTTTGGTTTGTAATGTGAATCTAACATTCAATTGTAATTTGTAACTTGTAACTTGTAACTTGTAAGGGATGCTTTCTTAATGTTGTTGGTCATGAGTTAGTATTTGACAACATGGTTTTCCAATGTTGTTTTATTTGTATTGGTGTTCTTTCTCTCTGGCTATTGTATACACAACAGCATTAACAGCATTGTTATTTGTTTCTCAACATACACAAGAATTTGCAATCAAATTGTTAGTGCTTTGATGCTTTGTTCCGAAGTGGTTGTGAGAAACATTTACTCCAAAGTTTTAGGCCCATGTAGTTATAGATGATGAATTGGTTCATTAAGAGATGAAAATTAGAAAGCCCGCATTGATCATACCAATGGAAACACTTTTGTATATGAAATGAATATTTCAATGAATAAAAGAAATCACTCTTTAGTAGTTCTGGTAAAATAAATAAATAAATATGGCACTTACTCCAATTGTAGGTGATCTAAGGGGAGGAACAATTACAAAGCTCTTTAGAGCAAGAGCTCCAAAGGATGCACCAAAAGAAAACTGACATTGTTCCATAATTTGTAAAAATCCCTAAAAATATTGCAAGGAAGTATGAACTCACTCTATTGACTATGTATTCTTCTTTAGATGCAATCTTCCTAGTGTATCTTCTAGCTTTGGTTACTTTTTACACAATCAACTTTTTTGGCGTATCCACTTGAGATTACGTTGAAACTAAATAATTGAAAAATAAGCAATGCTGACATTAGTAAGATTTCATTCCAATGCCACTGGAAACCTATAGATTACTCATTTACTCTGCAAGGTTCATTCGCAGAGGGTGATCAAGGAAGGATATGGTCAATGAAGAACAAGGGAATATTTCTTAACTTTTTGGTGTTGAGGGATGGAAGATGTTAGGTTATGTGAAAGATGTTTATTGGTTTGAGGAGTCACAATAAGATATTGTAATGCGTTTGCAGCCTTATTCTTTGATCAAGATATGAATCCACATGCTTGATTTTATTACAATGTTTTAGTTCTAAAGTGATATAATCTTCTTGTATTTGAATGGAAAATAGAAAAGGGCAATGTGTATATGCTGATTATCGAGCCTGATACACCATGTATATATTTTCTGTTTAGCATACCAATTCATGCACGTTATATCCTACCATTGTTGCTATTTGAAAACTCATGGGATATTTTAACATTTTTTATAGGTGATTCAAACAGGGGGGTTTTAAGAAAAAAAATCAGTGCTGGGAATGACAGTATTAAAACGCTATGTGCTGCGACTATTCATATCTTTGAAGTACATAACAGCTAATGTGGTAGATAGAAACAATGGACGGATTGTTGCAACTGCGTCCACAGTTGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAACGCTAAGGCTGCAGCAGTTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGATGGTCTCGAACAGGGGCAAGGAAGAGGGATTCATGCAGACGTAAACAAGGAAATTGAGAAGAAAGGCTTCAAAAACCGAACAAAGATCTGGGCTATAGTGAACGCACTGAAAAATAACGGCGTTAAACTCATACTCGACAACAATGTTGATGATGCATCTCGGTCCAGTTATCAATAAGCATCCCCGGCAATCTTTTCGGCCTTCCCTGGAAAAAAAGGGGGTGAGACTAGAGCTCGACCAGTCATCATGAAAGACTAGATTTTGCTTAATTGAAGGAACTATCTTTATTAGTTACAATCAGATTAAACGTCAGTCACTCATGATATTTGGAAGTCCATGAAGTAGAGAACTTTTTACCTCCACTTCTAAAATGATGGCATAGTGATAGTGATACCACCACCCACTTGGGCTAATGATGATGTTATCACAGTGAAATGGCCTTATATGATTATTACACTCTACACTTTTTTTCTCCTCTTGTCTTCCTTGTTTTACGTTGTTTTCTCCTTTCTCTTTTACTGGTTTCAGAGTTGTATAGGAGATTAGCTCTGGGCCAAGAGGTTGATTTCTTCCATCTGGCTGTCTCTTTCTTGCTCGTGACCTCTGATATAT

mRNA sequence

TAGGGCTTACTCGGATGTCCCTGGAGAGAGGATGTGAACAAAGCACACCAGTACAAGTCCGATCAGATAACTGAAGAGCGTCAACACCATTCACCAACTTATCAACTCCATTCTGCGATTCAGCCGCTGCCGCCTTGGAAGAAGCGGCCGCCGCCGCTGCTTTTCCTCCTCGCTTAGCCGCTGCAGCCGCCTTCTTCTGAGCCGCTTTCTTCTTGCTCGCGTCGGAAACCATCCTTAACCTAAGAAGTTTGAAAAAGAAAAGGAATCAACCACCAAAAAACAAAACCCCAACAACACAATCAAAATGAAATCAGAGACGTAAAGAAGAATCCTCAATACATGGACATACCTGGGGAAACGGAGAAAGAAGATCCAAGGAAAAACGACACCGACAGAGCGAGCGAGAAGGAGCAGTGAGAAGAGGAAGCAGATCTAGGGCTTGAAGAAATCGCTCTTCGTTTCTCACGGCGCTTTTGTTGGGCGCTTTTTATCAGAGACCTGCGACGCGTAATGCAATGCGGATCAAGGGTTCGAGGTTCTGTGATTCAGGAGGCTGAGCCTTCCGTTTTATAGCCCTCCTCGATCTTTCCACGTGTCTTTTACGAACCACTTCTTCTGGTTGCGTAGCCGACTGACTTTGTTAATTCTAATGCCCTCCCGAGGGCACATTAGACAGTTAACATTGAATGTAAATTGGGCTTGCTATGGAGCACTTGATCTTGATGACTCGGCCCAATTAGACCCATTAGGAGGCCCATGGGCCTTATCAGTTCGTAATCGGGAAGCCCATGGGCTTGCACTTTCGGTTTTCCAAAAAGAAAAGAAAAGAAAAAGAAGGAAATCAGATTTTCCTTCAATTTCACGCTGGCAGAACCACCCCCCCAACTCTCCTCACCGCCGCCCGCCATCCTCACGTCGTTCGCCCAATCACCGGCCGCCACGTCCGCGCCGTCGACCGCCGTTCCCATAGCCGTCGCCGATAAGTTTAGGTCATTGGGAATTCGATTGTTGTTACATGATCTTTGTGGGTCCTTGGTTCTGTCCTTGTCCTTCTTGGAGCTCATTGATCTATAATTCAAGGACCCATCAGCTCATTTGAACTTTTTATAAGCGCTGCAATACAGGTGATTCAAACAGGGGGGTTTTAAGAAAAAAAATCAGTGCTGGGAATGACAGTATTAAAACGCTATGTGCTGCGACTATTCATATCTTTGAAGTACATAACAGCTAATGTGGTAGATAGAAACAATGGACGGATTGTTGCAACTGCGTCCACAGTTGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAACGCTAAGGCTGCAGCAGTTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGATGGTCTCGAACAGGGGCAAGGAAGAGGGATTCATGCAGACGTAAACAAGGAAATTGAGAAGAAAGGCTTCAAAAACCGAACAAAGATCTGGGCTATAGTGAACGCACTGAAAAATAACGGCGTTAAACTCATACTCGACAACAATGTTGATGATGCATCTCGGTCCAGTTATCAATAAGCATCCCCGGCAATCTTTTCGGCCTTCCCTGGAAAAAAAGGGGGTGAGACTAGAGCTCGACCAGTCATCATGAAAGACTAGATTTTGCTTAATTGAAGGAACTATCTTTATTAGTTACAATCAGATTAAACGTCAGTCACTCATGATATTTGGAAGTCCATGAAGTAGAGAACTTTTTACCTCCACTTCTAAAATGATGGCATAGTGATAGTGATACCACCACCCACTTGGGCTAATGATGATGTTATCACAGTGAAATGGCCTTATATGATTATTACACTCTACACTTTTTTTCTCCTCTTGTCTTCCTTGTTTTACGTTGTTTTCTCCTTTCTCTTTTACTGGTTTCAGAGTTGTATAGGAGATTAGCTCTGGGCCAAGAGGTTGATTTCTTCCATCTGGCTGTCTCTTTCTTGCTCGTGACCTCTGATATAT

Coding sequence (CDS)

ATGACAGTATTAAAACGCTATGTGCTGCGACTATTCATATCTTTGAAGTACATAACAGCTAATGTGGTAGATAGAAACAATGGACGGATTGTTGCAACTGCGTCCACAGTTGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAACGCTAAGGCTGCAGCAGTTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGATGGTCTCGAACAGGGGCAAGGAAGAGGGATTCATGCAGACGTAAACAAGGAAATTGAGAAGAAAGGCTTCAAAAACCGAACAAAGATCTGGGCTATAGTGAACGCACTGAAAAATAACGGCGTTAAACTCATACTCGACAACAATGTTGATGATGCATCTCGGTCCAGTTATCAATAA

Protein sequence

MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVDDASRSSYQ
Homology
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BLAST of Bhi10G000121 vs. TAIR10
Match: AT3G45020.1 (Ribosomal L18p/L5e family protein)

HSP 1 Score: 194.1 bits (492), Expect = 5.2e-50
Identity = 94/111 (84.68%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLF+S+KYITANVVDRNNGRIV TASTVEH+IK SLECGR+CNAKAAA+VG
Sbjct: 1   MTVLKRYVLRLFMSIKYITANVVDRNNGRIVTTASTVEHTIKNSLECGRTCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGV 112
           EVLAMRLKV+GL+ GQGRGIHADV KEIEKKGFK+RTK+WA++N+L+NNGV
Sbjct: 61  EVLAMRLKVEGLQDGQGRGIHADVKKEIEKKGFKSRTKVWAVINSLRNNGV 111

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BLAST of Bhi10G000121 vs. Swiss-Prot
Match: sp|Q5F5U3|RL18_NEIG1 (50S ribosomal protein L18 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=rplR PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05
Identity = 33/108 (30.56%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 4   LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
           LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  A + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

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BLAST of Bhi10G000121 vs. Swiss-Prot
Match: sp|A9M3V0|RL18_NEIM0 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=rplR PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05
Identity = 33/108 (30.56%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 4   LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
           LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  A + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

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BLAST of Bhi10G000121 vs. Swiss-Prot
Match: sp|Q9JQQ6|RL18_NEIMA (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) OX=122587 GN=rplR PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05
Identity = 33/108 (30.56%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 4   LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
           LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  A + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

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BLAST of Bhi10G000121 vs. Swiss-Prot
Match: sp|Q7DDT0|RL18_NEIMB (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=rplR PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05
Identity = 33/108 (30.56%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 4   LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
           LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  A + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

[Close]
BLAST of Bhi10G000121 vs. Swiss-Prot
Match: sp|A1KRI9|RL18_NEIMF (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18) OX=272831 GN=rplR PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05
Identity = 33/108 (30.56%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 4   LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
           LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21  LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64  AMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGV 112
           A + K  G+E+              ++ GF+   ++ A+  A + NG+
Sbjct: 81  AEKAKAAGVEK-----------VAFDRSGFQYHGRVKALAEAARENGL 115

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BLAST of Bhi10G000121 vs. TrEMBL
Match: tr|A0A1S4E442|A0A1S4E442_CUCME (uncharacterized protein LOC103501501 OS=Cucumis melo OX=3656 GN=LOC103501501 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-57
Identity = 118/129 (91.47%), Postives = 127/129 (98.45%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNV- 120
           EVLAMRLKVDGLEQGQGRGIHAD+NKEIEKKGF+NRTKIWAIVN+LKNNGVKLIL+NNV 
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120

Query: 121 DDASRSSYQ 129
           DDA++S+YQ
Sbjct: 121 DDAAQSNYQ 129

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BLAST of Bhi10G000121 vs. TrEMBL
Match: tr|A0A0A0KX15|A0A0A0KX15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007080 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.5e-56
Identity = 116/129 (89.92%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MT+LKRYVLRLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VG
Sbjct: 92  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 151

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120
           EVLAMRLKVDGLEQGQGRGIHAD+ KEIEKKGFKN TKIWAIVN+LKNNGVKLILDNNVD
Sbjct: 152 EVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 211

Query: 121 D-ASRSSYQ 129
           D A++S+YQ
Sbjct: 212 DNAAQSNYQ 220

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BLAST of Bhi10G000121 vs. TrEMBL
Match: tr|A0A2N9ELK5|A0A2N9ELK5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7658 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.9e-56
Identity = 115/126 (91.27%), Postives = 122/126 (96.83%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLF+S+KYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVLRLFLSIKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120
           EVLAMRLKV+GLEQGQGRGIH DVNKE+EKKGFKNRTKIWAIVNALKNNGVKLILD+N D
Sbjct: 61  EVLAMRLKVEGLEQGQGRGIHVDVNKEVEKKGFKNRTKIWAIVNALKNNGVKLILDDNDD 120

Query: 121 DASRSS 127
           + S+ S
Sbjct: 121 NTSQPS 126

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BLAST of Bhi10G000121 vs. TrEMBL
Match: tr|A0A2N9J8M5|A0A2N9J8M5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61504 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.0e-55
Identity = 113/124 (91.13%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLF+S+KYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVLRLFLSIKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120
           EVLAMRLKV+GLEQGQGRGIH DVNKE+EKKGFK+RTKIWAIVNALKNNGVKLILD+N D
Sbjct: 61  EVLAMRLKVEGLEQGQGRGIHVDVNKEVEKKGFKSRTKIWAIVNALKNNGVKLILDDNDD 120

Query: 121 DASR 125
           + S+
Sbjct: 121 NTSQ 124

[Close]
BLAST of Bhi10G000121 vs. TrEMBL
Match: tr|A0A2R6PEW3|A0A2R6PEW3_ACTCH (50S ribosomal protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30129 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.5e-55
Identity = 112/127 (88.19%), Postives = 122/127 (96.06%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGRI+AT+STVEH+IK +LECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIIATSSTVEHAIKSTLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120
           EVLAMRLKV+GLEQGQGRGIH DVNKE+EKKGFKNRTK+WAIVNALKNNGVKLILD++ +
Sbjct: 61  EVLAMRLKVEGLEQGQGRGIHVDVNKEVEKKGFKNRTKVWAIVNALKNNGVKLILDDDDN 120

Query: 121 DASRSSY 128
            ASR SY
Sbjct: 121 GASRPSY 127

[Close]
BLAST of Bhi10G000121 vs. NCBI nr
Match: XP_023511782.1 (uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511783.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511784.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511785.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511786.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511787.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511788.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 3.8e-59
Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120
           EVLAMRLKVDGLEQGQGRGIH DVNKEIEKKGFKNRTKIWAIVN+LKNNGVKLILDNN D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDVNKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNNDD 120

Query: 121 DASRSSYQ 129
           DASR SY+
Sbjct: 121 DASRPSYE 128

[Close]
BLAST of Bhi10G000121 vs. NCBI nr
Match: XP_022943852.1 (uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943853.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943854.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943855.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943856.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943857.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943858.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943860.1 uncharacterized protein LOC111448460 [Cucurbita moschata])

HSP 1 Score: 236.5 bits (602), Expect = 5.0e-59
Identity = 121/128 (94.53%), Postives = 125/128 (97.66%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120
           EVLAMRLKVDGLEQGQGRGIH D+NKEIEKKGFKNRTKIWAIVN+LKNNGVKLILDNN D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDINKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNNDD 120

Query: 121 DASRSSYQ 129
           DASR SY+
Sbjct: 121 DASRPSYE 128

[Close]
BLAST of Bhi10G000121 vs. NCBI nr
Match: XP_022985582.1 (uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985583.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985584.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985585.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985586.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985588.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985589.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985590.1 uncharacterized protein LOC111483610 [Cucurbita maxima])

HSP 1 Score: 234.2 bits (596), Expect = 2.5e-58
Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120
           EVLAMRLKVDGLEQGQGRGIH D+NKEIEKKGFKNRTKIWAIVN+LKNNGVKLILDNN D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDINKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNNDD 120

Query: 121 DASRSSYQ 129
           DA R SY+
Sbjct: 121 DAVRPSYE 128

[Close]
BLAST of Bhi10G000121 vs. NCBI nr
Match: XP_016902998.1 (PREDICTED: uncharacterized protein LOC103501501 [Cucumis melo])

HSP 1 Score: 230.7 bits (587), Expect = 2.8e-57
Identity = 118/129 (91.47%), Postives = 127/129 (98.45%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNV- 120
           EVLAMRLKVDGLEQGQGRGIHAD+NKEIEKKGF+NRTKIWAIVN+LKNNGVKLIL+NNV 
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADINKEIEKKGFRNRTKIWAIVNSLKNNGVKLILNNNVD 120

Query: 121 DDASRSSYQ 129
           DDA++S+YQ
Sbjct: 121 DDAAQSNYQ 129

[Close]
BLAST of Bhi10G000121 vs. NCBI nr
Match: XP_011653002.1 (PREDICTED: uncharacterized protein LOC101206481 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 2.3e-56
Identity = 116/129 (89.92%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MT+LKRYVLRLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VG
Sbjct: 1   MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120
           EVLAMRLKVDGLEQGQGRGIHAD+ KEIEKKGFKN TKIWAIVN+LKNNGVKLILDNNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120

Query: 121 D-ASRSSYQ 129
           D A++S+YQ
Sbjct: 121 DNAAQSNYQ 129

The following BLAST results are available for this feature:
BLAST of Bhi10G000121 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G45020.15.2e-5084.68Ribosomal L18p/L5e family protein[more]
BLAST of Bhi10G000121 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q5F5U3|RL18_NEIG13.7e-0530.5650S ribosomal protein L18 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090... [more]
sp|A9M3V0|RL18_NEIM03.7e-0530.5650S ribosomal protein L18 OS=Neisseria meningitidis serogroup C (strain 053442) ... [more]
sp|Q9JQQ6|RL18_NEIMA3.7e-0530.5650S ribosomal protein L18 OS=Neisseria meningitidis serogroup A / serotype 4A (s... [more]
sp|Q7DDT0|RL18_NEIMB3.7e-0530.5650S ribosomal protein L18 OS=Neisseria meningitidis serogroup B (strain MC58) OX... [more]
sp|A1KRI9|RL18_NEIMF3.7e-0530.5650S ribosomal protein L18 OS=Neisseria meningitidis serogroup C / serotype 2a (s... [more]
BLAST of Bhi10G000121 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E442|A0A1S4E442_CUCME1.8e-5791.47uncharacterized protein LOC103501501 OS=Cucumis melo OX=3656 GN=LOC103501501 PE=... [more]
tr|A0A0A0KX15|A0A0A0KX15_CUCSA1.5e-5689.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007080 PE=4 SV=1[more]
tr|A0A2N9ELK5|A0A2N9ELK5_FAGSY5.9e-5691.27Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7658 PE=4 SV=1[more]
tr|A0A2N9J8M5|A0A2N9J8M5_FAGSY5.0e-5591.13Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61504 PE=4 SV=1[more]
tr|A0A2R6PEW3|A0A2R6PEW3_ACTCH8.5e-5588.1950S ribosomal protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_... [more]
BLAST of Bhi10G000121 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023511782.13.8e-5995.31uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511783.... [more]
XP_022943852.15.0e-5994.53uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943853.1 unchar... [more]
XP_022985582.12.5e-5893.75uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985583.1 uncharac... [more]
XP_016902998.12.8e-5791.47PREDICTED: uncharacterized protein LOC103501501 [Cucumis melo][more]
XP_011653002.12.3e-5689.92PREDICTED: uncharacterized protein LOC101206481 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: INTERPRO
TermDefinition
IPR005484Ribosomal_L18
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0008150 biological_process
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000121Bhi10M000121mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005484Ribosomal protein L18PFAMPF00861Ribosomal_L18pcoord: 5..74
e-value: 9.5E-9
score: 35.5
IPR005484Ribosomal protein L18PANTHERPTHR1289939S RIBOSOMAL PROTEIN L18, MITOCHONDRIALcoord: 1..127
NoneNo IPR availableGENE3DG3DSA:3.30.420.100coord: 3..113
e-value: 1.1E-19
score: 72.7
NoneNo IPR availablePANTHERPTHR12899:SF4SUBFAMILY NOT NAMEDcoord: 1..127
NoneNo IPR availableCDDcd00432Ribosomal_L18_L5ecoord: 5..111
e-value: 1.16008E-15
score: 67.1799
NoneNo IPR availableSUPERFAMILYSSF53137Translational machinery componentscoord: 4..111

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi10G000121Csa6G147610Cucumber (Chinese Long) v2cuwgoB606
Bhi10G000121MELO3C026909Melon (DHL92) v3.5.1mewgoB001
Bhi10G000121ClCG02G021440Watermelon (Charleston Gray)wcgwgoB300
Bhi10G000121CmoCh20G005440Cucurbita moschata (Rifu)cmowgoB0691
Bhi10G000121Lsi10G012380Bottle gourd (USVL1VR-Ls)lsiwgoB070
Bhi10G000121Cp4.1LG16g05120Cucurbita pepo (Zucchini)cpewgoB0357
Bhi10G000121MELO3C026909.2Melon (DHL92) v3.6.1medwgoB130
Bhi10G000121Carg03215Silver-seed gourdcarwgoB0421
Bhi10G000121CsaV3_6G014220Cucumber (Chinese Long) v3cucwgoB627
Bhi10G000121Cla008712Watermelon (97103) v1wgowmB397
Bhi10G000121Cla97C02G047530Watermelon (97103) v2wgowmbB369
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi10G000121Wax gourdwgowgoB097
Bhi10G000121Cucumber (Gy14) v1cgywgoB769
Bhi10G000121Cucumber (Gy14) v2cgybwgoB579
Bhi10G000121Cucumber (Gy14) v2cgybwgoB586
Bhi10G000121Cucurbita maxima (Rimu)cmawgoB0697
Bhi10G000121Cucurbita maxima (Rimu)cmawgoB0747
Bhi10G000121Cucurbita moschata (Rifu)cmowgoB0738
Bhi10G000121Cucurbita pepo (Zucchini)cpewgoB0961
Bhi10G000121Wild cucumber (PI 183967)cpiwgoB611
Bhi10G000121Wild cucumber (PI 183967)cpiwgoB619
Bhi10G000121Cucumber (Chinese Long) v3cucwgoB634
Bhi10G000121Cucumber (Chinese Long) v2cuwgoB614
Bhi10G000121Bottle gourd (USVL1VR-Ls)lsiwgoB161
Bhi10G000121Melon (DHL92) v3.6.1medwgoB635
Bhi10G000121Melon (DHL92) v3.5.1mewgoB629
Bhi10G000121Watermelon (Charleston Gray)wcgwgoB382
Bhi10G000121Silver-seed gourdcarwgoB1068